| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799982
Identifier: 114799982
GI number: 114799982
Start: 1925397
End: 1926944
Strand: Direct
Name: 114799982
Synonym: HNE_1862
Alternate gene names: NA
Gene position: 1925397-1926944 (Clockwise)
Preceding gene: 114799222
Following gene: 114799622
Centisome position: 51.97
GC content: 61.76
Gene sequence:
>1548_bases ATGTTGACCAATAACAAATTCCGCGCGGTGCTTCTCGGCTGCGCTGCAGTTGCGCTTCTCGGCGCATGCAGCGGCTCCGA TGGCGTCGCCTCGCCTGGCGTTGGCGCGTTTGTCCCGCCGCCTTCCGCGCCGCCACCAGCCCCGCCCCCGCCGCCACCAG CGCCGCCTCCGGCGACCGGCGGCCCGGCGGCTGACTGCCCCGCTGATTTCTCAAACGTTGGTGTCATCTCTGACAACCGC ATCTGCCAACTTCCCAGCAGGATTGAAGGCAACCTCGTCGTTCCTAAACGCGATGGCACCGTCTATTCCATCAGCGGCCG TACAGAAGTTGGCCGTGACCTCGGCGCTGATCCAAACGCGCCAGATCCAAACGGTGTCGCTGGCGTCCTGACCATCGAGC CCGGCGTAACCATTTTTGGCGACGTTGGCCTGAACTACATTCTCGTGAACCGCGGCTCCCAGATCTTTGCCGAGGGCACA GCTGATGAGCCGATCATCATGACCAGCCGCGAGCGCGTTGAAGGCACGGCGACTGAGAACACGATCGGTCGCTGGGGCGG TCTCGTCATCAACGGCCGCGCTCCGACAACGGATGGCTGCGCGGCTCTCCCGCCGCCGGATGCCTCCTGCGAAGCGCAGG TCGAAGGTTCCAACGCGTTCTTTGGTGGTAATTCGCCTTCAGACTCCAGCGGGCGCATTCGCTATCTTCAGCTCTCCTAT TCCGGCTGGCGCATTGCACCGGACAACGAGCTGAACGGCATCACCTTTGCCGGCGTCGGCAACGGTACGACGGTCGACCA CGTCCAGGTCCACAACAGCTCGGATGACGGCATCGAAATCTTCGGTGGCAACCTCAATCTCAGCCACCTCGTCCTGACCG GTAACGACGACGAAAGCTTCGACACCGACTCCGGTTGGCGCGGCGCTGCCCAGTTCGGTATCGTTTACCAGCGCGCCGAT GGCGGTGACTACGGATGGGAAACCTCCTCTGCCGGCACCAATACGGCGACCTATTTCAGCCGCCCGACATATGCCAACTG GACCGTTGTAATGCGTGACGCCTCCACCCGCGACGGTATCATCCACAACTCTGGCCACACGGCTCGCGTTTATAACTCGG TGATCCGTAATCCGAGTGCGAACCAGTGCCTCCAGATTTCCGGCGCTGACACGATGGCGAACCCGAACGGCGTTGCCGGC AACGGCCCACTTTACAACTCGGTGTTCTTCTCCTGTGAAGGCGGCAACGTCGAGGGCTCCAACGGCACAACCACGCCAGA TGTTGAAACGCTCATCAATGCCGGCGCCAACAACGTGCTGGACGGGGTCTCAACCCTCATCAATGGCTTCATCAACGGTG ACAACGAGAACGCTGTAACTGCTTCGGCCTTCCCGGACGCTCTGAACGACGGTGACGGCCTGCCTGCAAACAGCTTCATC ACCGACTTCCTGGAGCCGGTGGATTATATCGGTGCTGTCCGCGATGAAACGGACAACTGGTACGAAGGCTGGACCTGCAG CCTGCCCGGCCAGGCCACCTGCCACTAA
Upstream 100 bases:
>100_bases TTAAGGGTTCGCGCTGCGGGCAGATGACAAACATCGTCTGGAAAGCGCGGCGGGGGGAACCGTCTGCGCGCCCGCTCAGG GTTCATGACGGAGAGACTAT
Downstream 100 bases:
>100_bases CGCATGATTTGGCGGAGGCCGCGGTTTCCGTGGCCTCCGCCTCAATCATATCTGCAGCATCCATTCAGGATCTCGTCACA TGAAATTCAGCTCGCTGTCT
Product: putative lipoprotein
Products: NA
Alternate protein names: Outer Membrane Lipoprotein; Serine/Threonine Protein Kinase; Cell Surface Receptor IPT/TIG Domain Protein; Secreted Protein; Drug/Metabolite Permease; Non-Specific Serine/Threonine Protein Kinase; Parallel Beta-Helix Repeat Protein
Number of amino acids: Translated: 515; Mature: 515
Protein sequence:
>515_residues MLTNNKFRAVLLGCAAVALLGACSGSDGVASPGVGAFVPPPSAPPPAPPPPPPAPPPATGGPAADCPADFSNVGVISDNR ICQLPSRIEGNLVVPKRDGTVYSISGRTEVGRDLGADPNAPDPNGVAGVLTIEPGVTIFGDVGLNYILVNRGSQIFAEGT ADEPIIMTSRERVEGTATENTIGRWGGLVINGRAPTTDGCAALPPPDASCEAQVEGSNAFFGGNSPSDSSGRIRYLQLSY SGWRIAPDNELNGITFAGVGNGTTVDHVQVHNSSDDGIEIFGGNLNLSHLVLTGNDDESFDTDSGWRGAAQFGIVYQRAD GGDYGWETSSAGTNTATYFSRPTYANWTVVMRDASTRDGIIHNSGHTARVYNSVIRNPSANQCLQISGADTMANPNGVAG NGPLYNSVFFSCEGGNVEGSNGTTTPDVETLINAGANNVLDGVSTLINGFINGDNENAVTASAFPDALNDGDGLPANSFI TDFLEPVDYIGAVRDETDNWYEGWTCSLPGQATCH
Sequences:
>Translated_515_residues MLTNNKFRAVLLGCAAVALLGACSGSDGVASPGVGAFVPPPSAPPPAPPPPPPAPPPATGGPAADCPADFSNVGVISDNR ICQLPSRIEGNLVVPKRDGTVYSISGRTEVGRDLGADPNAPDPNGVAGVLTIEPGVTIFGDVGLNYILVNRGSQIFAEGT ADEPIIMTSRERVEGTATENTIGRWGGLVINGRAPTTDGCAALPPPDASCEAQVEGSNAFFGGNSPSDSSGRIRYLQLSY SGWRIAPDNELNGITFAGVGNGTTVDHVQVHNSSDDGIEIFGGNLNLSHLVLTGNDDESFDTDSGWRGAAQFGIVYQRAD GGDYGWETSSAGTNTATYFSRPTYANWTVVMRDASTRDGIIHNSGHTARVYNSVIRNPSANQCLQISGADTMANPNGVAG NGPLYNSVFFSCEGGNVEGSNGTTTPDVETLINAGANNVLDGVSTLINGFINGDNENAVTASAFPDALNDGDGLPANSFI TDFLEPVDYIGAVRDETDNWYEGWTCSLPGQATCH >Mature_515_residues MLTNNKFRAVLLGCAAVALLGACSGSDGVASPGVGAFVPPPSAPPPAPPPPPPAPPPATGGPAADCPADFSNVGVISDNR ICQLPSRIEGNLVVPKRDGTVYSISGRTEVGRDLGADPNAPDPNGVAGVLTIEPGVTIFGDVGLNYILVNRGSQIFAEGT ADEPIIMTSRERVEGTATENTIGRWGGLVINGRAPTTDGCAALPPPDASCEAQVEGSNAFFGGNSPSDSSGRIRYLQLSY SGWRIAPDNELNGITFAGVGNGTTVDHVQVHNSSDDGIEIFGGNLNLSHLVLTGNDDESFDTDSGWRGAAQFGIVYQRAD GGDYGWETSSAGTNTATYFSRPTYANWTVVMRDASTRDGIIHNSGHTARVYNSVIRNPSANQCLQISGADTMANPNGVAG NGPLYNSVFFSCEGGNVEGSNGTTTPDVETLINAGANNVLDGVSTLINGFINGDNENAVTASAFPDALNDGDGLPANSFI TDFLEPVDYIGAVRDETDNWYEGWTCSLPGQATCH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53303; Mature: 53303
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTNNKFRAVLLGCAAVALLGACSGSDGVASPGVGAFVPPPSAPPPAPPPPPPAPPPATG CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPAADCPADFSNVGVISDNRICQLPSRIEGNLVVPKRDGTVYSISGRTEVGRDLGADPNA CCCCCCCCCCCCEEEECCCCEEECCCCCCCCEEEECCCCCEEEECCCCHHHHHCCCCCCC PDPNGVAGVLTIEPGVTIFGDVGLNYILVNRGSQIFAEGTADEPIIMTSRERVEGTATEN CCCCCEEEEEEECCCCEEEECCCCEEEEEECCCEEEECCCCCCCEEEECHHHCCCCCCCC TIGRWGGLVINGRAPTTDGCAALPPPDASCEAQVEGSNAFFGGNSPSDSSGRIRYLQLSY CHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCEEEEEEEC SGWRIAPDNELNGITFAGVGNGTTVDHVQVHNSSDDGIEIFGGNLNLSHLVLTGNDDESF CCEEECCCCCCCCEEEEECCCCCEEEEEEEECCCCCCEEEEECCCCEEEEEEECCCCCCC DTDSGWRGAAQFGIVYQRADGGDYGWETSSAGTNTATYFSRPTYANWTVVMRDASTRDGI CCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCE IHNSGHTARVYNSVIRNPSANQCLQISGADTMANPNGVAGNGPLYNSVFFSCEGGNVEGS EECCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEECC NGTTTPDVETLINAGANNVLDGVSTLINGFINGDNENAVTASAFPDALNDGDGLPANSFI CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHH TDFLEPVDYIGAVRDETDNWYEGWTCSLPGQATCH HHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCC >Mature Secondary Structure MLTNNKFRAVLLGCAAVALLGACSGSDGVASPGVGAFVPPPSAPPPAPPPPPPAPPPATG CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPAADCPADFSNVGVISDNRICQLPSRIEGNLVVPKRDGTVYSISGRTEVGRDLGADPNA CCCCCCCCCCCCEEEECCCCEEECCCCCCCCEEEECCCCCEEEECCCCHHHHHCCCCCCC PDPNGVAGVLTIEPGVTIFGDVGLNYILVNRGSQIFAEGTADEPIIMTSRERVEGTATEN CCCCCEEEEEEECCCCEEEECCCCEEEEEECCCEEEECCCCCCCEEEECHHHCCCCCCCC TIGRWGGLVINGRAPTTDGCAALPPPDASCEAQVEGSNAFFGGNSPSDSSGRIRYLQLSY CHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCEEEEEEEC SGWRIAPDNELNGITFAGVGNGTTVDHVQVHNSSDDGIEIFGGNLNLSHLVLTGNDDESF CCEEECCCCCCCCEEEEECCCCCEEEEEEEECCCCCCEEEEECCCCEEEEEEECCCCCCC DTDSGWRGAAQFGIVYQRADGGDYGWETSSAGTNTATYFSRPTYANWTVVMRDASTRDGI CCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCE IHNSGHTARVYNSVIRNPSANQCLQISGADTMANPNGVAGNGPLYNSVFFSCEGGNVEGS EECCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEECC NGTTTPDVETLINAGANNVLDGVSTLINGFINGDNENAVTASAFPDALNDGDGLPANSFI CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHH TDFLEPVDYIGAVRDETDNWYEGWTCSLPGQATCH HHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA