| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is ybeZ [C]
Identifier: 114799960
GI number: 114799960
Start: 2830103
End: 2830912
Strand: Direct
Name: ybeZ [C]
Synonym: HNE_2669
Alternate gene names: 114799960
Gene position: 2830103-2830912 (Clockwise)
Preceding gene: 114799843
Following gene: 114800423
Centisome position: 76.39
GC content: 65.56
Gene sequence:
>810_bases ATGGGTAAACGCAATCCTGCCAAACGTCTGAAAGCCGCATCAGAAGTGCGCGGATCAGCCTGGTTCGACGAGCCGGCACG CAGCAGCAAGGGACCCCATCTCCACGCCATCGAAGGCGGCCGCGGCTGGCACCCGGACGACGCCCACCCCGTCACCAACA TGGCCCCCCAGCAGGACCGCACCCAGCGCTACCAGAAAACGGTGAAGCCCCGCTCCGAAAACCAGGCCCAGCTCATGGCC GCCATGGACACCCACGCCCTCGTCTGCGCGCTGGGCCCCGCCGGCACCGGCAAGACCTACCTCGCCATCTGCAAGGCGGT CGAAGCCCTGCAGAAAGGCGCGGTCTCCAAGATCGTCCTCTCCCGCCCCGCGGTTGAGGCCGGTGAGCAGATCGGCTTCC TGCCCGGCGGCATGGAAGACAAGCTCGCCCCCTATCTCCGCCCGCTCTACGACGCGCTGTCAGACCGGCTCTCCCCGGCT CAGCTCAAGCACATGCTGTCGGAAGGCGTCATTGAGATCGCCCCCATCGGCTTCATGCGCGGGCGCACGCTCAACAACGC CTTCATCGTTATCGATGAGGCCCAGAACTGCACCTACACCCAGCTGAAAATGCTGCTCACCCGCCTTGGCTGGCACTCCA CGATGGTCATCACCGGCGACCCGAACCAGACCGACCTCTTGCCGGAATTCTCCGGCCTGGCCAAAGCTGCCGACAAGCTC GAAGCGCTCTCGGGCGCCTCGGTCATCCGCCTGGAAGCGGCCGATGTGGTCCGCCATCCGCTGGTCGCCGAAATGCTGGA CGTTCTGTAA
Upstream 100 bases:
>100_bases CCGCCTTCAAGGCCGGCTCCTTTTCCTTCCTACGTTTCACCGGGCCGCTGCGCATTTCTGCCAGCGGCTTTTTTCATGCC TGCAACCAAGGAGGCCTCCC
Downstream 100 bases:
>100_bases CGCCCAAACGGCCCCTGATCGGTTAACCTTGAAGCCGGGTCTCACAGCGAGGCCCGGCTTTTTGATTGGCCTGTTTCTTG CCTGCGGATGAGGCATAGAC
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MGKRNPAKRLKAASEVRGSAWFDEPARSSKGPHLHAIEGGRGWHPDDAHPVTNMAPQQDRTQRYQKTVKPRSENQAQLMA AMDTHALVCALGPAGTGKTYLAICKAVEALQKGAVSKIVLSRPAVEAGEQIGFLPGGMEDKLAPYLRPLYDALSDRLSPA QLKHMLSEGVIEIAPIGFMRGRTLNNAFIVIDEAQNCTYTQLKMLLTRLGWHSTMVITGDPNQTDLLPEFSGLAKAADKL EALSGASVIRLEAADVVRHPLVAEMLDVL
Sequences:
>Translated_269_residues MGKRNPAKRLKAASEVRGSAWFDEPARSSKGPHLHAIEGGRGWHPDDAHPVTNMAPQQDRTQRYQKTVKPRSENQAQLMA AMDTHALVCALGPAGTGKTYLAICKAVEALQKGAVSKIVLSRPAVEAGEQIGFLPGGMEDKLAPYLRPLYDALSDRLSPA QLKHMLSEGVIEIAPIGFMRGRTLNNAFIVIDEAQNCTYTQLKMLLTRLGWHSTMVITGDPNQTDLLPEFSGLAKAADKL EALSGASVIRLEAADVVRHPLVAEMLDVL >Mature_268_residues GKRNPAKRLKAASEVRGSAWFDEPARSSKGPHLHAIEGGRGWHPDDAHPVTNMAPQQDRTQRYQKTVKPRSENQAQLMAA MDTHALVCALGPAGTGKTYLAICKAVEALQKGAVSKIVLSRPAVEAGEQIGFLPGGMEDKLAPYLRPLYDALSDRLSPAQ LKHMLSEGVIEIAPIGFMRGRTLNNAFIVIDEAQNCTYTQLKMLLTRLGWHSTMVITGDPNQTDLLPEFSGLAKAADKLE ALSGASVIRLEAADVVRHPLVAEMLDVL
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=202, Percent_Identity=50, Blast_Score=196, Evalue=1e-51, Organism=Escherichia coli, GI1787257, Length=211, Percent_Identity=40.7582938388626, Blast_Score=165, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004087 - InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 29178; Mature: 29047
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKRNPAKRLKAASEVRGSAWFDEPARSSKGPHLHAIEGGRGWHPDDAHPVTNMAPQQDR CCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHH TQRYQKTVKPRSENQAQLMAAMDTHALVCALGPAGTGKTYLAICKAVEALQKGAVSKIVL HHHHHHHCCCCCCCHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHH SRPAVEAGEQIGFLPGGMEDKLAPYLRPLYDALSDRLSPAQLKHMLSEGVIEIAPIGFMR CCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCHHC GRTLNNAFIVIDEAQNCTYTQLKMLLTRLGWHSTMVITGDPNQTDLLPEFSGLAKAADKL CCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH EALSGASVIRLEAADVVRHPLVAEMLDVL HHHCCCCEEEEEHHHHHHHHHHHHHHHHC >Mature Secondary Structure GKRNPAKRLKAASEVRGSAWFDEPARSSKGPHLHAIEGGRGWHPDDAHPVTNMAPQQDR CCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHH TQRYQKTVKPRSENQAQLMAAMDTHALVCALGPAGTGKTYLAICKAVEALQKGAVSKIVL HHHHHHHCCCCCCCHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHH SRPAVEAGEQIGFLPGGMEDKLAPYLRPLYDALSDRLSPAQLKHMLSEGVIEIAPIGFMR CCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCHHC GRTLNNAFIVIDEAQNCTYTQLKMLLTRLGWHSTMVITGDPNQTDLLPEFSGLAKAADKL CCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH EALSGASVIRLEAADVVRHPLVAEMLDVL HHHCCCCEEEEEHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]