| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799843
Identifier: 114799843
GI number: 114799843
Start: 2828637
End: 2829248
Strand: Direct
Name: 114799843
Synonym: HNE_2667
Alternate gene names: NA
Gene position: 2828637-2829248 (Clockwise)
Preceding gene: 114798339
Following gene: 114799960
Centisome position: 76.35
GC content: 66.5
Gene sequence:
>612_bases ATGACGCGACCGCTCGCCCAATCCCCCGACACCGAAACGGGCAAGAAATCGGGCCGTGACCGGCGCGGCTTCAAACGGAT CGAACTCAAACTGGCCGGCCGGTTCCTGATCGGCGACAGCGAAGATCACGTGCTCAGCACGGCCGACATCTCCTGCGACG GCGCCTTCATCGTCTCCTCCGAGCGCCCCGGCCTCGACCAGCAGGTCGTCTGCTATTTCGATGAAGTCGGCCGGGTCGTG GCCAATGTGGTGCGCGTCTCGCCCGAAGGCTTTGCCGTGCGCTTCCACACCTCCCCCCACAAGCGCGACAAGCTCGCCGA CCGCCTCACCTGGCTTCTCAACCGCGACAAGCTCGGCCTTGAGGAAGAGCGCGGCGAAGCCCGCTACCAGGCCAGCGGCG AAGCCACCGTGAACCTCTCCAATGGCGGCCACATCCAGTGCAGCGTCACCGACATCTCCCTCACCGGCGCCGCCTTTGAA ACCGGCGGCAAGGCCCCCTTCGTCGGAGAGCGCGTCACGGTCGGCAATCTCGTCGGCGAGGTCGTGCGGGTGGCCGGCAA CAAGTTCGCCGTCCGCTACATCCACGGCCAGAAGCCCGCCAGCACGAACTGA
Upstream 100 bases:
>100_bases TGAGCAACCAATTGTCAACATTCATGAACTATCTGAAAGGCGTGACATTTTGCCTACAAAAGCGCTGGGGGGCGCGGTCG GCTAAGCAGGAAGTAGCGAC
Downstream 100 bases:
>100_bases CGCCCTGGGCGTTCGCGTCCCGGCCTGTCCGAGTTTGTCCCCGCTTGTCCGGGCGCTGTCTCAGCCCAGGCGCTTCATGC CCCTGGCGTGACGCTGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilZ
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MTRPLAQSPDTETGKKSGRDRRGFKRIELKLAGRFLIGDSEDHVLSTADISCDGAFIVSSERPGLDQQVVCYFDEVGRVV ANVVRVSPEGFAVRFHTSPHKRDKLADRLTWLLNRDKLGLEEERGEARYQASGEATVNLSNGGHIQCSVTDISLTGAAFE TGGKAPFVGERVTVGNLVGEVVRVAGNKFAVRYIHGQKPASTN
Sequences:
>Translated_203_residues MTRPLAQSPDTETGKKSGRDRRGFKRIELKLAGRFLIGDSEDHVLSTADISCDGAFIVSSERPGLDQQVVCYFDEVGRVV ANVVRVSPEGFAVRFHTSPHKRDKLADRLTWLLNRDKLGLEEERGEARYQASGEATVNLSNGGHIQCSVTDISLTGAAFE TGGKAPFVGERVTVGNLVGEVVRVAGNKFAVRYIHGQKPASTN >Mature_202_residues TRPLAQSPDTETGKKSGRDRRGFKRIELKLAGRFLIGDSEDHVLSTADISCDGAFIVSSERPGLDQQVVCYFDEVGRVVA NVVRVSPEGFAVRFHTSPHKRDKLADRLTWLLNRDKLGLEEERGEARYQASGEATVNLSNGGHIQCSVTDISLTGAAFET GGKAPFVGERVTVGNLVGEVVRVAGNKFAVRYIHGQKPASTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22070; Mature: 21939
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPLAQSPDTETGKKSGRDRRGFKRIELKLAGRFLIGDSEDHVLSTADISCDGAFIVSS CCCCCCCCCCCCCCHHCCCCCCCCEEEEEEEEEEEEECCCCCCEEEECCCCCCCEEEEEC ERPGLDQQVVCYFDEVGRVVANVVRVSPEGFAVRFHTSPHKRDKLADRLTWLLNRDKLGL CCCCCCCCEEHHHHHHHHHHHHHHEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCC EEERGEARYQASGEATVNLSNGGHIQCSVTDISLTGAAFETGGKAPFVGERVTVGNLVGE CHHCCCCEEECCCCEEEEECCCCEEEEEEEEEEEECCEECCCCCCCCCCCEEEHHHHHHH VVRVAGNKFAVRYIHGQKPASTN HHHHCCCEEEEEEEECCCCCCCC >Mature Secondary Structure TRPLAQSPDTETGKKSGRDRRGFKRIELKLAGRFLIGDSEDHVLSTADISCDGAFIVSS CCCCCCCCCCCCCHHCCCCCCCCEEEEEEEEEEEEECCCCCCEEEECCCCCCCEEEEEC ERPGLDQQVVCYFDEVGRVVANVVRVSPEGFAVRFHTSPHKRDKLADRLTWLLNRDKLGL CCCCCCCCEEHHHHHHHHHHHHHHEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCC EEERGEARYQASGEATVNLSNGGHIQCSVTDISLTGAAFETGGKAPFVGERVTVGNLVGE CHHCCCCEEECCCCEEEEECCCCEEEEEEEEEEEECCEECCCCCCCCCCCEEEHHHHHHH VVRVAGNKFAVRYIHGQKPASTN HHHHCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA