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The map label for this gene is dinF [H]

Identifier: 114799900

GI number: 114799900

Start: 2934191

End: 2935504

Strand: Reverse

Name: dinF [H]

Synonym: HNE_2771

Alternate gene names: 114799900

Gene position: 2935504-2934191 (Counterclockwise)

Preceding gene: 114797831

Following gene: 114799393

Centisome position: 79.23

GC content: 67.58

Gene sequence:

>1314_bases
ATGACTACCTCAATTCTCACCCGTTCGCGCGCGCTGGCGCTCGCCTGGCCCATCATGCTGGCGCAGGTGGCGACCGCAAC
GACCGGCATTGTCGATACTGCCGTGATGGGGCGCTACGGCACAGCGGCGGAGCTGGCGGCCGTAGGCCTGGCGGCGGTTG
TGTTCAACTTTCTATATTGGGGTTTCGGCTTCCTGCGCATGGCTACCACCGGCCTTACCGCGCAGGCCGATGGGGCAGGT
GACACCGGCGAGACAAACGCCATTCTCAAGCGCGCGCTGCTGCTCGGCGGCGGGCTGGGCCTGCTCATCCTCATCACCTT
CCCGCTGGTCTCGCATTTTTCCCTCGCCCTGTTCCAGGCAGACGCCCCTGTGGAGGCCGAAGCGGCGGCCTATTTCTGGG
GCCGCATCTGGGGCGCGCCTGCCGCGCTCATGGGCTTTGCCATCACCGGCTGGCTGATCGGCACGGGCCGCACGCGCGCG
CTGCTCGCCGTGCAGATCGGCATGAACGCCGTCAATGGCGGGCTCGATTTCCTGTTTGTGGCGGTGTTCGACTGGGGGCC
GGCGGGGATCGGCGTAGGGACGGCGATGGCGGAATGGGCGGCGCTGGCGCTCGGCCTGGTCATCGTGCGCTCGGCCCTTG
GCCCCGGCGGGCAGCTGCTGGACCGGGCGAAGCTCACCTCCCTCATCAGCGCCAACCGCGACATCATGATCCGTACACTG
GCGCTTCTTTTCAGCTTTGCCTGGTTCGTGAATTCCGGCGCTCAACAGGGCATAGCCGTCATGGCGGGCAATCAGGTGCT
GCTGCAATTCATCGCTGTCTCCGCCTTCGTGCTCGACGCGTTTGCCTTTGTCGCGGAGAAGGAAGCGGGCGCGGCCTATG
GCGCGCGGGACCGGGCACGGCTGGTGCGGGCCATGCGGGTGACGAGCGAGTTGGCGCTGGCCTGTGGCGCGCTGTTTTCG
CTGGTCTTCTGGCTGGGCGGGGGCGCGGTTATCCACGCCTTCATTCTTGACCCGGCCGCACGGGACGCAGCGCTGGCCTA
TCTGCCCTGGTGCGCGGCGGTCCCTTTCATCGGGGTCGCCGCCTGGCAACTCGACGGGCTGTTTCTGGGCACGACGCAGG
GGCCGGCCGTGCGCAATGCCGGCATGCTGGCGATGGCGGCATACCTTGTAACGGACCTGACGCTTGCCCCGGCGTTCAAC
AATGCGGGCGTCTGGACGGCTTTCCTTCTCAGCTATGTCTACCGCGCCGGCGCGCTGGCGCTCTACTGGCCGCGCCTGAT
GGGGCGCCTTGCGCCGGAAACTGCGCGCGGTTGA

Upstream 100 bases:

>100_bases
AGCCTGGCACTTTGCCACACGATTGAAGAAACCCTCCCTGTACGCACAGGGAGGGTTTTTTCGTGCGCCGGCCTTTGAAA
CCCGCTAAGCCCTGCCGGTC

Downstream 100 bases:

>100_bases
GACGCTTGCCGCGCGGGCATCCGCAAACATCCGTATTCCGCCCATTCTGCCAGAGGCGCAGGCTTTCCCCGGACAGATGA
GACCGGAGAGAGACGATGCA

Product: putative DNA-damage-inducible protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MTTSILTRSRALALAWPIMLAQVATATTGIVDTAVMGRYGTAAELAAVGLAAVVFNFLYWGFGFLRMATTGLTAQADGAG
DTGETNAILKRALLLGGGLGLLILITFPLVSHFSLALFQADAPVEAEAAAYFWGRIWGAPAALMGFAITGWLIGTGRTRA
LLAVQIGMNAVNGGLDFLFVAVFDWGPAGIGVGTAMAEWAALALGLVIVRSALGPGGQLLDRAKLTSLISANRDIMIRTL
ALLFSFAWFVNSGAQQGIAVMAGNQVLLQFIAVSAFVLDAFAFVAEKEAGAAYGARDRARLVRAMRVTSELALACGALFS
LVFWLGGGAVIHAFILDPAARDAALAYLPWCAAVPFIGVAAWQLDGLFLGTTQGPAVRNAGMLAMAAYLVTDLTLAPAFN
NAGVWTAFLLSYVYRAGALALYWPRLMGRLAPETARG

Sequences:

>Translated_437_residues
MTTSILTRSRALALAWPIMLAQVATATTGIVDTAVMGRYGTAAELAAVGLAAVVFNFLYWGFGFLRMATTGLTAQADGAG
DTGETNAILKRALLLGGGLGLLILITFPLVSHFSLALFQADAPVEAEAAAYFWGRIWGAPAALMGFAITGWLIGTGRTRA
LLAVQIGMNAVNGGLDFLFVAVFDWGPAGIGVGTAMAEWAALALGLVIVRSALGPGGQLLDRAKLTSLISANRDIMIRTL
ALLFSFAWFVNSGAQQGIAVMAGNQVLLQFIAVSAFVLDAFAFVAEKEAGAAYGARDRARLVRAMRVTSELALACGALFS
LVFWLGGGAVIHAFILDPAARDAALAYLPWCAAVPFIGVAAWQLDGLFLGTTQGPAVRNAGMLAMAAYLVTDLTLAPAFN
NAGVWTAFLLSYVYRAGALALYWPRLMGRLAPETARG
>Mature_436_residues
TTSILTRSRALALAWPIMLAQVATATTGIVDTAVMGRYGTAAELAAVGLAAVVFNFLYWGFGFLRMATTGLTAQADGAGD
TGETNAILKRALLLGGGLGLLILITFPLVSHFSLALFQADAPVEAEAAAYFWGRIWGAPAALMGFAITGWLIGTGRTRAL
LAVQIGMNAVNGGLDFLFVAVFDWGPAGIGVGTAMAEWAALALGLVIVRSALGPGGQLLDRAKLTSLISANRDIMIRTLA
LLFSFAWFVNSGAQQGIAVMAGNQVLLQFIAVSAFVLDAFAFVAEKEAGAAYGARDRARLVRAMRVTSELALACGALFSL
VFWLGGGAVIHAFILDPAARDAALAYLPWCAAVPFIGVAAWQLDGLFLGTTQGPAVRNAGMLAMAAYLVTDLTLAPAFNN
AGVWTAFLLSYVYRAGALALYWPRLMGRLAPETARG

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family [H]

Homologues:

Organism=Escherichia coli, GI1790477, Length=418, Percent_Identity=33.4928229665072, Blast_Score=154, Evalue=7e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 45677; Mature: 45546

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSILTRSRALALAWPIMLAQVATATTGIVDTAVMGRYGTAAELAAVGLAAVVFNFLYW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
GFGFLRMATTGLTAQADGAGDTGETNAILKRALLLGGGLGLLILITFPLVSHFSLALFQA
HHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEC
DAPVEAEAAAYFWGRIWGAPAALMGFAITGWLIGTGRTRALLAVQIGMNAVNGGLDFLFV
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCEEEEEEECCHHHCCCHHEEEH
AVFDWGPAGIGVGTAMAEWAALALGLVIVRSALGPGGQLLDRAKLTSLISANRDIMIRTL
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH
ALLFSFAWFVNSGAQQGIAVMAGNQVLLQFIAVSAFVLDAFAFVAEKEAGAAYGARDRAR
HHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LVRAMRVTSELALACGALFSLVFWLGGGAVIHAFILDPAARDAALAYLPWCAAVPFIGVA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
AWQLDGLFLGTTQGPAVRNAGMLAMAAYLVTDLTLAPAFNNAGVWTAFLLSYVYRAGALA
HEEECCEEEECCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHH
LYWPRLMGRLAPETARG
HHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TTSILTRSRALALAWPIMLAQVATATTGIVDTAVMGRYGTAAELAAVGLAAVVFNFLYW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
GFGFLRMATTGLTAQADGAGDTGETNAILKRALLLGGGLGLLILITFPLVSHFSLALFQA
HHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEC
DAPVEAEAAAYFWGRIWGAPAALMGFAITGWLIGTGRTRALLAVQIGMNAVNGGLDFLFV
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCEEEEEEECCHHHCCCHHEEEH
AVFDWGPAGIGVGTAMAEWAALALGLVIVRSALGPGGQLLDRAKLTSLISANRDIMIRTL
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH
ALLFSFAWFVNSGAQQGIAVMAGNQVLLQFIAVSAFVLDAFAFVAEKEAGAAYGARDRAR
HHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LVRAMRVTSELALACGALFSLVFWLGGGAVIHAFILDPAARDAALAYLPWCAAVPFIGVA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
AWQLDGLFLGTTQGPAVRNAGMLAMAAYLVTDLTLAPAFNNAGVWTAFLLSYVYRAGALA
HEEECCEEEECCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHH
LYWPRLMGRLAPETARG
HHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]