| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799849
Identifier: 114799849
GI number: 114799849
Start: 3219040
End: 3219960
Strand: Direct
Name: 114799849
Synonym: HNE_3049
Alternate gene names: NA
Gene position: 3219040-3219960 (Clockwise)
Preceding gene: 114798648
Following gene: 114797059
Centisome position: 86.88
GC content: 58.52
Gene sequence:
>921_bases ATGCGAACCGACCTCGACCACCTCCCTCATGGCAAGCAGCGCGAACTCGCCCGCGTGACGGAGATCCTGTTCGAGGAATT CACCGACGCCATGAAAGGCGCTTCTTCCCCGAAGAAGAAGGAAGGCCGCATCCTCAAGATTATTCTGTTCGGATCCTATG CGCGCGGCACTTGGGTGGACGAGCCCCACACGGAAAAGGGCTATCTCAGCGACTACGACCTGCTGATCGTCGTCAACCAG CAGAGCGTGGTCGATTTTGCCACCTATTGGTACCGCGCCGAAGACCGGATCATGCGGGAGACCGGGATCAGGACCCCGGT CAATTTCATTGTCCACACGATGGACGAGGTGAACTCCGCCCTCTCCCAGGGCCAGTATTTCTTCACTGACGTCGTCAAAG AGGGCGTCGCGCTCTACGATCTCAAAGGAAGCACGCAGTTTATCACGCCCCAGCCGCAGACGGCGGAAGAGGCACTGGCG ACCGCGGAGAAGCATTTTGAGCAACGCATTGAAGGCGTGCGAAGCGCGCTAGAATTCTTCAGATTTGGCGTAGATGCAGG ACGTTACAATGATGCGTCGTTCATGCTGCATCAGGCTGTAGAGCGCCTCTACGCTTGCCTGCTCCTTGTAGAGACGAACT ATTCGCCTTCGACCCACAGCATCAAGTTCCTCCGCTCGCTGGCTGAGCAGATCGACCCGGACCTGATTGCCGTCTGGCCG CGTGAGACCAAGCAGGACCGGCGGCTGTTTGAATTGCTCAAGCGCGCCTATGTCGATGCGCGGTACTCAGAGCATTATGC TATCACGGCCGAAGAGCTTGCCTGGCTGGGGGAGCGGGCGGAGATCCTGCGAGCACTCGTTGAGAAGCGGGCGAGCGGCA AGATCGAACAATTGAAGGCCAGGGCATTGAACGGGGACTGA
Upstream 100 bases:
>100_bases GGCGCAGCGCGCCCTGCCTCCCCTTCCTGCTTACAAGAGACCCGACTGAAGGGAGGATTGACGCTTTGCACGCCGTGCGG CGCTCCTTAAGATGACGATG
Downstream 100 bases:
>100_bases GTTCTATGCCGTCAGCCTGCTCAAAAGTTATCTGGCGCAAGGACGAGGGCTCCGCCGAAGGGACGCATAGGTGACAGCCC TTGCCCGGTGCCGGCGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleotidyltransferase Protein; DNA Polymerase Beta Domain Protein Region; HEPN Domain-Containing Protein; Hepn Domain Protein; Nucleotidyltransferase/HEPN Domain-Containing Protein; Xin-Antitoxin System Toxin Component; HEPN Domain Protein; DNA Polymerase Beta Subunit; Nucleotidyltransferase Domain-Containing Protein
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MRTDLDHLPHGKQRELARVTEILFEEFTDAMKGASSPKKKEGRILKIILFGSYARGTWVDEPHTEKGYLSDYDLLIVVNQ QSVVDFATYWYRAEDRIMRETGIRTPVNFIVHTMDEVNSALSQGQYFFTDVVKEGVALYDLKGSTQFITPQPQTAEEALA TAEKHFEQRIEGVRSALEFFRFGVDAGRYNDASFMLHQAVERLYACLLLVETNYSPSTHSIKFLRSLAEQIDPDLIAVWP RETKQDRRLFELLKRAYVDARYSEHYAITAEELAWLGERAEILRALVEKRASGKIEQLKARALNGD
Sequences:
>Translated_306_residues MRTDLDHLPHGKQRELARVTEILFEEFTDAMKGASSPKKKEGRILKIILFGSYARGTWVDEPHTEKGYLSDYDLLIVVNQ QSVVDFATYWYRAEDRIMRETGIRTPVNFIVHTMDEVNSALSQGQYFFTDVVKEGVALYDLKGSTQFITPQPQTAEEALA TAEKHFEQRIEGVRSALEFFRFGVDAGRYNDASFMLHQAVERLYACLLLVETNYSPSTHSIKFLRSLAEQIDPDLIAVWP RETKQDRRLFELLKRAYVDARYSEHYAITAEELAWLGERAEILRALVEKRASGKIEQLKARALNGD >Mature_306_residues MRTDLDHLPHGKQRELARVTEILFEEFTDAMKGASSPKKKEGRILKIILFGSYARGTWVDEPHTEKGYLSDYDLLIVVNQ QSVVDFATYWYRAEDRIMRETGIRTPVNFIVHTMDEVNSALSQGQYFFTDVVKEGVALYDLKGSTQFITPQPQTAEEALA TAEKHFEQRIEGVRSALEFFRFGVDAGRYNDASFMLHQAVERLYACLLLVETNYSPSTHSIKFLRSLAEQIDPDLIAVWP RETKQDRRLFELLKRAYVDARYSEHYAITAEELAWLGERAEILRALVEKRASGKIEQLKARALNGD
Specific function: Unknown
COG id: COG1708
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35177; Mature: 35177
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS50910 HEPN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTDLDHLPHGKQRELARVTEILFEEFTDAMKGASSPKKKEGRILKIILFGSYARGTWVD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCC EPHTEKGYLSDYDLLIVVNQQSVVDFATYWYRAEDRIMRETGIRTPVNFIVHTMDEVNSA CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LSQGQYFFTDVVKEGVALYDLKGSTQFITPQPQTAEEALATAEKHFEQRIEGVRSALEFF HHCCCHHHHHHHHCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RFGVDAGRYNDASFMLHQAVERLYACLLLVETNYSPSTHSIKFLRSLAEQIDPDLIAVWP HHCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCEEEECC RETKQDRRLFELLKRAYVDARYSEHYAITAEELAWLGERAEILRALVEKRASGKIEQLKA CCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH RALNGD HHCCCC >Mature Secondary Structure MRTDLDHLPHGKQRELARVTEILFEEFTDAMKGASSPKKKEGRILKIILFGSYARGTWVD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCC EPHTEKGYLSDYDLLIVVNQQSVVDFATYWYRAEDRIMRETGIRTPVNFIVHTMDEVNSA CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LSQGQYFFTDVVKEGVALYDLKGSTQFITPQPQTAEEALATAEKHFEQRIEGVRSALEFF HHCCCHHHHHHHHCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RFGVDAGRYNDASFMLHQAVERLYACLLLVETNYSPSTHSIKFLRSLAEQIDPDLIAVWP HHCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCEEEECC RETKQDRRLFELLKRAYVDARYSEHYAITAEELAWLGERAEILRALVEKRASGKIEQLKA CCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH RALNGD HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA