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The map label for this gene is cirA [C]

Identifier: 114797059

GI number: 114797059

Start: 3220484

End: 3222820

Strand: Direct

Name: cirA [C]

Synonym: HNE_3050

Alternate gene names: 114797059

Gene position: 3220484-3222820 (Clockwise)

Preceding gene: 114799849

Following gene: 114799036

Centisome position: 86.92

GC content: 60.93

Gene sequence:

>2337_bases
ATGGCCGTAAAGTTCAATCAATTCATGGCATTGGCGCTGTGTGCCACGGCGCTCACGCCGGTCGCCGCCTATGCCCAGAC
CGAGACCGAAGAGACCGCCGCGTCCGATGAACGCCGCTTTGGCGCCATCGTCGTGACCGCCCAGCGCCGCGAGGAAAACC
TCCTCGACGTGCCCCTCTCCGTCTCCGCCTTCAGCGGCGACCTCCTGGCCGACCTCGGCGTCCAGACGATGGACGAGGTC
GCCAAGATCTCCCCCAACGTGACCCTGGAAGTCTCCCGCGGCACCAACAACACCATCTCCGCCTTCATCCGCGGCGTCGG
CCAGCAGGACCCTGTGTCCGGCTTTGAATCCGGGGTCGGCATCTATGTCGATGACGTCTACCTCAACCGCCCGCAGGGTT
CGGTGCTGGAGGTCTATGACATTGAACGGATTGAAGTTCTGCGCGGGCCGCAGGGCACCCTCTATGGCCGCAACACCATC
GGCGGCGCGGTGAAATATGTCACCAAGGGCCTCTCTGATGAGCCCACCCTGAAGGCGCGCGGCGTGCTCGGCACCTATGG
CCAGAAGGATGTCGTGGCCTCCGCCTCCACCGCGCTGGCAGACACCTTCCGCGTCGGCGCCGGCGTCGGCATCTTCACCC
GCGACGGCTTCGGCGAAAACCTCATCACCGGCGAAGAAAACTACAATAAAGACGTCCTCTCCGCCCGCCTCTCCGCCGAA
TGGGATGTCACCGATGCCTTCCAGCTGCGCATTGCCGGCGACTATATGAATGACGAGTCCAATGCCCGCCAGGGGCACCG
TCTGATCACGGATCTGTTCCCGCCGTTCACCTACCCGGTTCTGGACGATGTCTATGACAACCGCGCCGGCCTCAATGTGG
TGGAGCAGGTCGTGGAAGTCTATGGCGGATCGCTCGTTGCCGAGTACGAAGTCAACGACACCATCACGCTGAAGAACATC
CTGGCTTATCGCGAGGATGAAGGCACCAGCCCGATCGACTTCGACGCCCTGCCCGAAGCAGATGTCGATGTTCCCGGCAT
CTACACCAATGACCAGCTGTCCAACGAATTCCAGCTGCTCTACTCGGGCGACCGGCTGAACGGTATCGTGGGCGCCTATT
ATCTTGATGCCAACTCCTCCACCGTGTTTGATGTGCTGCTTGGCACGACGGGCGCGGTTCTCAACCTTCCGGGCCTCAAC
GCCCAGACTTTCGGCGAGGTCAGCACGGAAACCTGGTCTGTGTTTGCAGACTTCACCTATGATCTGACCGACCAGTTCGC
CATCTCGCTGGGCGGGCGTTACACCGAGGACAAGCGCTCCTCGATCGTGCTGCGCCGCACCTATATCGGCGGCTTCTCGC
CCTTCTTTGGCGGGCCCGGCGTGCCGATCGCAACGACATCGAACTTCGACGGTTCTGCCAAGTTCGACGATTTCAGCCCG
CGCGTCTCGCTGACCTACAAGCCGACCGAAGATCACACTCTGTACACGACCTATTCGCAGGGCTTCAAGGGCGGCTCCTT
TGACCCGCGCGGACAGACCTCGGCTGCGCCTGACCTTGATCAGGATGGCACGGTCTCCCCCGAGGAAGTCTTTGCCTTCA
TGCAGTTCGACCCCGAAGAGGTCGACAGCTATGAGATCGGCTGGAAGGCCAACACCTTCAACAACCGCGTGCAGACCAGC
ATCGCCGCCTTCTTCATGGACTACCAGAACGTCCAGATCCCCGGCTCCGTCGGCCTCGACACCAATGGAGACGGCGTCAA
TGACACCTTCACCGGCGTGACGACAAATGCTGCGTCGGCCGACCTCTGGGGCGTCGAGTTTGAAGGCACGGCCGTGCTCG
GCGAAGAAATCTTCAACGACTCCGATCTGTTCACCTCGTCAGTCTCGGTTGGCTATATCAATGCCGAGTTCAACGAGTTC
ATCGATGCCTTCGGCAATGATGTCGCCGATGAGCGCGTCTTCCAGAACACGCCGGAATGGACCGGCAGCCTGCGTCTGAC
CTATGACACGCCGTTCCACATCCTTCAGCGCGAAGGCCGCCTGACGCTCAACACGCTTGCTTCCTACCGGGATGATTCAA
GCCAGTTCGAAGTCCGCAGCCCGCTGGATCAGGAAGCCTACACCCTGGTTGATCTCGGCTTGCGCTGGAAACCGGACGAC
AGCCGCTGGGGCTTCACCTTCACCGGCAAGAACCTGACGGACGAGCGCTATAAGGTCGCCGGATATAACTTCATCAATCC
GGCTACGGGTGCCCCTACGCTTGGCCTTGAAGGCGTGCTCAATGCTTATTACGGCGATCCCCGCACCTTCAGCATAGGCG
TGGATTACGAATTCTGA

Upstream 100 bases:

>100_bases
GGGAACACATTGACAGCCTCGGCCCGCCCTGTCATTTCAACACCTGTTGAAAATCAACAAGCGTTGAAAAAGCCTGATAA
CGGGCATTTGGGAGGACAAG

Downstream 100 bases:

>100_bases
GGTCCGGGGCGTTTCCTCCTGGCTGCGTCTCACGGAACGTCGAGCGCAGCCATTTCCGGACCTTAACTCAGGGCGGCACC
TTCGGGTGCCGCCTTTTTTC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Domain Protein; NB-Dependent Receptor Plug; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Plug Domain Protein; NB Dependent Receptor; Outer Membrane Protein; NB-Dependent Receptor Protein; Outer Membrane Receptor Family Protein; Nb-Dependent Receptor; NB-Dependent Siderophore Receptor; Receptor -Mostly Fe Transport; Helix-Turn-Helix AraC Type; NB Dependent Receptor Protein

Number of amino acids: Translated: 778; Mature: 777

Protein sequence:

>778_residues
MAVKFNQFMALALCATALTPVAAYAQTETEETAASDERRFGAIVVTAQRREENLLDVPLSVSAFSGDLLADLGVQTMDEV
AKISPNVTLEVSRGTNNTISAFIRGVGQQDPVSGFESGVGIYVDDVYLNRPQGSVLEVYDIERIEVLRGPQGTLYGRNTI
GGAVKYVTKGLSDEPTLKARGVLGTYGQKDVVASASTALADTFRVGAGVGIFTRDGFGENLITGEENYNKDVLSARLSAE
WDVTDAFQLRIAGDYMNDESNARQGHRLITDLFPPFTYPVLDDVYDNRAGLNVVEQVVEVYGGSLVAEYEVNDTITLKNI
LAYREDEGTSPIDFDALPEADVDVPGIYTNDQLSNEFQLLYSGDRLNGIVGAYYLDANSSTVFDVLLGTTGAVLNLPGLN
AQTFGEVSTETWSVFADFTYDLTDQFAISLGGRYTEDKRSSIVLRRTYIGGFSPFFGGPGVPIATTSNFDGSAKFDDFSP
RVSLTYKPTEDHTLYTTYSQGFKGGSFDPRGQTSAAPDLDQDGTVSPEEVFAFMQFDPEEVDSYEIGWKANTFNNRVQTS
IAAFFMDYQNVQIPGSVGLDTNGDGVNDTFTGVTTNAASADLWGVEFEGTAVLGEEIFNDSDLFTSSVSVGYINAEFNEF
IDAFGNDVADERVFQNTPEWTGSLRLTYDTPFHILQREGRLTLNTLASYRDDSSQFEVRSPLDQEAYTLVDLGLRWKPDD
SRWGFTFTGKNLTDERYKVAGYNFINPATGAPTLGLEGVLNAYYGDPRTFSIGVDYEF

Sequences:

>Translated_778_residues
MAVKFNQFMALALCATALTPVAAYAQTETEETAASDERRFGAIVVTAQRREENLLDVPLSVSAFSGDLLADLGVQTMDEV
AKISPNVTLEVSRGTNNTISAFIRGVGQQDPVSGFESGVGIYVDDVYLNRPQGSVLEVYDIERIEVLRGPQGTLYGRNTI
GGAVKYVTKGLSDEPTLKARGVLGTYGQKDVVASASTALADTFRVGAGVGIFTRDGFGENLITGEENYNKDVLSARLSAE
WDVTDAFQLRIAGDYMNDESNARQGHRLITDLFPPFTYPVLDDVYDNRAGLNVVEQVVEVYGGSLVAEYEVNDTITLKNI
LAYREDEGTSPIDFDALPEADVDVPGIYTNDQLSNEFQLLYSGDRLNGIVGAYYLDANSSTVFDVLLGTTGAVLNLPGLN
AQTFGEVSTETWSVFADFTYDLTDQFAISLGGRYTEDKRSSIVLRRTYIGGFSPFFGGPGVPIATTSNFDGSAKFDDFSP
RVSLTYKPTEDHTLYTTYSQGFKGGSFDPRGQTSAAPDLDQDGTVSPEEVFAFMQFDPEEVDSYEIGWKANTFNNRVQTS
IAAFFMDYQNVQIPGSVGLDTNGDGVNDTFTGVTTNAASADLWGVEFEGTAVLGEEIFNDSDLFTSSVSVGYINAEFNEF
IDAFGNDVADERVFQNTPEWTGSLRLTYDTPFHILQREGRLTLNTLASYRDDSSQFEVRSPLDQEAYTLVDLGLRWKPDD
SRWGFTFTGKNLTDERYKVAGYNFINPATGAPTLGLEGVLNAYYGDPRTFSIGVDYEF
>Mature_777_residues
AVKFNQFMALALCATALTPVAAYAQTETEETAASDERRFGAIVVTAQRREENLLDVPLSVSAFSGDLLADLGVQTMDEVA
KISPNVTLEVSRGTNNTISAFIRGVGQQDPVSGFESGVGIYVDDVYLNRPQGSVLEVYDIERIEVLRGPQGTLYGRNTIG
GAVKYVTKGLSDEPTLKARGVLGTYGQKDVVASASTALADTFRVGAGVGIFTRDGFGENLITGEENYNKDVLSARLSAEW
DVTDAFQLRIAGDYMNDESNARQGHRLITDLFPPFTYPVLDDVYDNRAGLNVVEQVVEVYGGSLVAEYEVNDTITLKNIL
AYREDEGTSPIDFDALPEADVDVPGIYTNDQLSNEFQLLYSGDRLNGIVGAYYLDANSSTVFDVLLGTTGAVLNLPGLNA
QTFGEVSTETWSVFADFTYDLTDQFAISLGGRYTEDKRSSIVLRRTYIGGFSPFFGGPGVPIATTSNFDGSAKFDDFSPR
VSLTYKPTEDHTLYTTYSQGFKGGSFDPRGQTSAAPDLDQDGTVSPEEVFAFMQFDPEEVDSYEIGWKANTFNNRVQTSI
AAFFMDYQNVQIPGSVGLDTNGDGVNDTFTGVTTNAASADLWGVEFEGTAVLGEEIFNDSDLFTSSVSVGYINAEFNEFI
DAFGNDVADERVFQNTPEWTGSLRLTYDTPFHILQREGRLTLNTLASYRDDSSQFEVRSPLDQEAYTLVDLGLRWKPDDS
RWGFTFTGKNLTDERYKVAGYNFINPATGAPTLGLEGVLNAYYGDPRTFSIGVDYEF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85067; Mature: 84936

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: PS00018 EF_HAND_1 ; PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVKFNQFMALALCATALTPVAAYAQTETEETAASDERRFGAIVVTAQRREENLLDVPLS
CCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEECCCCCCCEECCEE
VSAFSGDLLADLGVQTMDEVAKISPNVTLEVSRGTNNTISAFIRGVGQQDPVSGFESGVG
EEECCCCHHHHCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCHHHCCCE
IYVDDVYLNRPQGSVLEVYDIERIEVLRGPQGTLYGRNTIGGAVKYVTKGLSDEPTLKAR
EEEEEEEEECCCCCEEEEEECCEEEEEECCCCCEEECCCHHHHHHHHHCCCCCCCCEEEC
GVLGTYGQKDVVASASTALADTFRVGAGVGIFTRDGFGENLITGEENYNKDVLSARLSAE
CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCC
WDVTDAFQLRIAGDYMNDESNARQGHRLITDLFPPFTYPVLDDVYDNRAGLNVVEQVVEV
CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHH
YGGSLVAEYEVNDTITLKNILAYREDEGTSPIDFDALPEADVDVPGIYTNDQLSNEFQLL
HCCCEEEEEECCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEE
YSGDRLNGIVGAYYLDANSSTVFDVLLGTTGAVLNLPGLNAQTFGEVSTETWSVFADFTY
EECCCCCCEEEEEEEECCCCEEEEEECCCCCCEEECCCCCCCCCCCCCCCEEEEEEEEEE
DLTDQFAISLGGRYTEDKRSSIVLRRTYIGGFSPFFGGPGVPIATTSNFDGSAKFDDFSP
CCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
RVSLTYKPTEDHTLYTTYSQGFKGGSFDPRGQTSAAPDLDQDGTVSPEEVFAFMQFDPEE
EEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEECCHHH
VDSYEIGWKANTFNNRVQTSIAAFFMDYQNVQIPGSVGLDTNGDGVNDTFTGVTTNAASA
CCCEEECEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCEECCCCCC
DLWGVEFEGTAVLGEEIFNDSDLFTSSVSVGYINAEFNEFIDAFGNDVADERVFQNTPEW
CEEEEEECCCEEEHHHHCCCCCCEECCEEEEEEECHHHHHHHHHCCCHHHHHHHCCCCCC
TGSLRLTYDTPFHILQREGRLTLNTLASYRDDSSQFEVRSPLDQEAYTLVDLGLRWKPDD
CCEEEEEECCCHHHHHCCCCEEEEHHHHCCCCCCCEEECCCCCCCCEEEEEECCEECCCC
SRWGFTFTGKNLTDERYKVAGYNFINPATGAPTLGLEGVLNAYYGDPRTFSIGVDYEF
CCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCC
>Mature Secondary Structure 
AVKFNQFMALALCATALTPVAAYAQTETEETAASDERRFGAIVVTAQRREENLLDVPLS
CEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEECCCCCCCEECCEE
VSAFSGDLLADLGVQTMDEVAKISPNVTLEVSRGTNNTISAFIRGVGQQDPVSGFESGVG
EEECCCCHHHHCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCHHHCCCE
IYVDDVYLNRPQGSVLEVYDIERIEVLRGPQGTLYGRNTIGGAVKYVTKGLSDEPTLKAR
EEEEEEEEECCCCCEEEEEECCEEEEEECCCCCEEECCCHHHHHHHHHCCCCCCCCEEEC
GVLGTYGQKDVVASASTALADTFRVGAGVGIFTRDGFGENLITGEENYNKDVLSARLSAE
CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCC
WDVTDAFQLRIAGDYMNDESNARQGHRLITDLFPPFTYPVLDDVYDNRAGLNVVEQVVEV
CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHH
YGGSLVAEYEVNDTITLKNILAYREDEGTSPIDFDALPEADVDVPGIYTNDQLSNEFQLL
HCCCEEEEEECCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEE
YSGDRLNGIVGAYYLDANSSTVFDVLLGTTGAVLNLPGLNAQTFGEVSTETWSVFADFTY
EECCCCCCEEEEEEEECCCCEEEEEECCCCCCEEECCCCCCCCCCCCCCCEEEEEEEEEE
DLTDQFAISLGGRYTEDKRSSIVLRRTYIGGFSPFFGGPGVPIATTSNFDGSAKFDDFSP
CCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
RVSLTYKPTEDHTLYTTYSQGFKGGSFDPRGQTSAAPDLDQDGTVSPEEVFAFMQFDPEE
EEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEECCHHH
VDSYEIGWKANTFNNRVQTSIAAFFMDYQNVQIPGSVGLDTNGDGVNDTFTGVTTNAASA
CCCEEECEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCEECCCCCC
DLWGVEFEGTAVLGEEIFNDSDLFTSSVSVGYINAEFNEFIDAFGNDVADERVFQNTPEW
CEEEEEECCCEEEHHHHCCCCCCEECCEEEEEEECHHHHHHHHHCCCHHHHHHHCCCCCC
TGSLRLTYDTPFHILQREGRLTLNTLASYRDDSSQFEVRSPLDQEAYTLVDLGLRWKPDD
CCEEEEEECCCHHHHHCCCCEEEEHHHHCCCCCCCEEECCCCCCCCEEEEEECCEECCCC
SRWGFTFTGKNLTDERYKVAGYNFINPATGAPTLGLEGVLNAYYGDPRTFSIGVDYEF
CCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA