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The map label for this gene is copB [H]

Identifier: 114799827

GI number: 114799827

Start: 1748640

End: 1749422

Strand: Reverse

Name: copB [H]

Synonym: HNE_1706

Alternate gene names: 114799827

Gene position: 1749422-1748640 (Counterclockwise)

Preceding gene: 114799240

Following gene: 114797680

Centisome position: 47.22

GC content: 58.24

Gene sequence:

>783_bases
ATGATTGCGACGATTATCCTGCTTTCACCGCTCGCAGCAGCGCCTGCCTTTGCTCAGGAGACGCCCGTACCTGGATCGCA
GGCCGAAGCCTATTGGGATAAGAATGAATTCAAGGCGTCTCAGGATGCCCTGAAAAAAGAACATGGCGGAGGGACAAATT
ACATGATCCTCGCCGACCGGTTCGAATACCAATCAGGCGAGGGCTCTCCCGCTCTTCTTCTGGAGGGTCAGGGGTGGTGG
GGTACGGACGAGAACCGGCTCTGGATAAAATCCGAGATCGACTATGATCTGGATGCTGGCAGTTTTGAAGAAACCGAACT
GCAGGCACTTTGGTCCCGGCCCGTCGCGCGGTACTTCGACCTGCAGGCAGGTGTGCGTCATGATTTCGAGCCGGGCCCTT
CCCGCACTTACGCGGTAGCCGGAATCCAGGGTCTCGCCCCTTATTGGTTCGAAGTCGACGGCGCAGTGTTCCTTAGTGAA
GAAGGTGATCTCTCTGCCCGCTTCGAAGCCGAGTATGAATTCCTGCTGACCCAGCGTCTCGTGCTTCAACCGCGCACGGA
ACTGAACTTCGCGGCTGAAGATGTGCCCGAACTTGAAACCGGCGCCGGACTATCGACAGCGGAACTTGGCCTGCGCCTTC
GCTATGAGTTCGATCGTCAGTTCGCGCCCTATGTCGGGGTCAATTGGCAAGCCTCGACCGGCGAGACCGCCGGCTTTGTC
CGGGCCCGTGGAGGAGACACAGAAACCCTCTCCTTCGTCACCGGCATCAGGCTCTGGTTCTGA

Upstream 100 bases:

>100_bases
ACATGACTTCGTCTACTCTGCCGACGGACGAGCCTCCGCCAAAAGAAGCCCCAATGACGGGCATGAGCCACGAAGGACAC
CGTTAATGACCCGCGCTCAG

Downstream 100 bases:

>100_bases
AGCGTATCTAATTGAAACTCTCGGTCCGGAAAGGACATCTCATGCACACGCCCAAATTAATCGCCGCAACACTTCTGGCG
CTCGCTCTCTCAGCTGCTCC

Product: copper resistance protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MIATIILLSPLAAAPAFAQETPVPGSQAEAYWDKNEFKASQDALKKEHGGGTNYMILADRFEYQSGEGSPALLLEGQGWW
GTDENRLWIKSEIDYDLDAGSFEETELQALWSRPVARYFDLQAGVRHDFEPGPSRTYAVAGIQGLAPYWFEVDGAVFLSE
EGDLSARFEAEYEFLLTQRLVLQPRTELNFAAEDVPELETGAGLSTAELGLRLRYEFDRQFAPYVGVNWQASTGETAGFV
RARGGDTETLSFVTGIRLWF

Sequences:

>Translated_260_residues
MIATIILLSPLAAAPAFAQETPVPGSQAEAYWDKNEFKASQDALKKEHGGGTNYMILADRFEYQSGEGSPALLLEGQGWW
GTDENRLWIKSEIDYDLDAGSFEETELQALWSRPVARYFDLQAGVRHDFEPGPSRTYAVAGIQGLAPYWFEVDGAVFLSE
EGDLSARFEAEYEFLLTQRLVLQPRTELNFAAEDVPELETGAGLSTAELGLRLRYEFDRQFAPYVGVNWQASTGETAGFV
RARGGDTETLSFVTGIRLWF
>Mature_260_residues
MIATIILLSPLAAAPAFAQETPVPGSQAEAYWDKNEFKASQDALKKEHGGGTNYMILADRFEYQSGEGSPALLLEGQGWW
GTDENRLWIKSEIDYDLDAGSFEETELQALWSRPVARYFDLQAGVRHDFEPGPSRTYAVAGIQGLAPYWFEVDGAVFLSE
EGDLSARFEAEYEFLLTQRLVLQPRTELNFAAEDVPELETGAGLSTAELGLRLRYEFDRQFAPYVGVNWQASTGETAGFV
RARGGDTETLSFVTGIRLWF

Specific function: Exact function not known. Possibly mediates copper resistance by its sequestration in the outer membrane [H]

COG id: COG3667

COG function: function code P; Uncharacterized protein involved in copper resistance

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007939 [H]

Pfam domain/function: PF05275 CopB [H]

EC number: NA

Molecular weight: Translated: 28943; Mature: 28943

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIATIILLSPLAAAPAFAQETPVPGSQAEAYWDKNEFKASQDALKKEHGGGTNYMILADR
CEEEEEEECCHHHCCCCCCCCCCCCCCCHHEECCHHHHHHHHHHHHHCCCCCEEEEEEEE
FEYQSGEGSPALLLEGQGWWGTDENRLWIKSEIDYDLDAGSFEETELQALWSRPVARYFD
EECCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHH
LQAGVRHDFEPGPSRTYAVAGIQGLAPYWFEVDGAVFLSEEGDLSARFEAEYEFLLTQRL
HCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCEEEEECCCCCEEEEHHHHHHHHHHHH
VLQPRTELNFAAEDVPELETGAGLSTAELGLRLRYEFDRQFAPYVGVNWQASTGETAGFV
HHCCCCCCCCCCCCCCCCCCCCCCCHHHHCEEEEEEECCCCCCEECCEEECCCCCCCCEE
RARGGDTETLSFVTGIRLWF
EECCCCCCEEHHHHEEEECC
>Mature Secondary Structure
MIATIILLSPLAAAPAFAQETPVPGSQAEAYWDKNEFKASQDALKKEHGGGTNYMILADR
CEEEEEEECCHHHCCCCCCCCCCCCCCCHHEECCHHHHHHHHHHHHHCCCCCEEEEEEEE
FEYQSGEGSPALLLEGQGWWGTDENRLWIKSEIDYDLDAGSFEETELQALWSRPVARYFD
EECCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHH
LQAGVRHDFEPGPSRTYAVAGIQGLAPYWFEVDGAVFLSEEGDLSARFEAEYEFLLTQRL
HCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCEEEEECCCCCEEEEHHHHHHHHHHHH
VLQPRTELNFAAEDVPELETGAGLSTAELGLRLRYEFDRQFAPYVGVNWQASTGETAGFV
HHCCCCCCCCCCCCCCCCCCCCCCCHHHHCEEEEEEECCCCCCEECCEEECCCCCCCCEE
RARGGDTETLSFVTGIRLWF
EECCCCCCEEHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3372485; 1924351 [H]