| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799813
Identifier: 114799813
GI number: 114799813
Start: 2696760
End: 2697359
Strand: Direct
Name: 114799813
Synonym: HNE_2544
Alternate gene names: NA
Gene position: 2696760-2697359 (Clockwise)
Preceding gene: 114797820
Following gene: 114798140
Centisome position: 72.79
GC content: 55.17
Gene sequence:
>600_bases ATGACATTCCGAACAATACTGCTCGCCGCCCCCGCTTTGATGCTTGCGCTTACCGGATGCGCCGTGACTGAAACCCTGGA GGAGCGAGAAACCGCCTTCCTGACCAGGGCGACGCCTGATTTTGCCGCCGGCATCAAAGTCATTGATGATCCGCTCAACC CGACAATCGAAATCAACACGATCGCCGCATATCAAGACTATCAGTTCAGCTGGGGTCCTCAGGAAGACCAGTTCCTCCGG GCCTATAAATTCCGCGACACAGGGAATGTTACTCTGCAAGGATATGTCGTGAGCGACATCCACGGGACTTGGCTTCAACC CATATCGGTGACCTTCCAGCACACGCTCTCAACCCGGACGGTTGACCGGATCAACTTCGATGCCAACCGGTGCTCTGCTC AAGGCTGCATGCATCGTGAGGATATTGTTTTTGAATTCACCGCAGAGGAACTCAATCAGGTGATTGAAGACATGGAGACG AAGGGCGAAACGGTCCTTGTGTTTCGGATCCAGGGCCGCTCGGGCGTCGACCGCGACGGCAGATTTCACATCAACGAGCT GAAGGCGTTTCGGCAGGCAGTGACCCGCGAGCTTTTTTGA
Upstream 100 bases:
>100_bases ATGTTGCCGATTGATCTACAGACTATGAGTCTCTTTTTCCGCTTGAACTCCGACGCAACCTGAGCGGCAATGAGACTCAT AGAGTGCAACAGGAGACCTC
Downstream 100 bases:
>100_bases GAACTGAAGCGTCACTGGCGTAGTTGACTCATGTCGCCGAATCAACTTTTCTGAAGACTGTTCCAAGGACGGGTCAGCTA TGTGTAGCGCCCGTCCTTTT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MTFRTILLAAPALMLALTGCAVTETLEERETAFLTRATPDFAAGIKVIDDPLNPTIEINTIAAYQDYQFSWGPQEDQFLR AYKFRDTGNVTLQGYVVSDIHGTWLQPISVTFQHTLSTRTVDRINFDANRCSAQGCMHREDIVFEFTAEELNQVIEDMET KGETVLVFRIQGRSGVDRDGRFHINELKAFRQAVTRELF
Sequences:
>Translated_199_residues MTFRTILLAAPALMLALTGCAVTETLEERETAFLTRATPDFAAGIKVIDDPLNPTIEINTIAAYQDYQFSWGPQEDQFLR AYKFRDTGNVTLQGYVVSDIHGTWLQPISVTFQHTLSTRTVDRINFDANRCSAQGCMHREDIVFEFTAEELNQVIEDMET KGETVLVFRIQGRSGVDRDGRFHINELKAFRQAVTRELF >Mature_198_residues TFRTILLAAPALMLALTGCAVTETLEERETAFLTRATPDFAAGIKVIDDPLNPTIEINTIAAYQDYQFSWGPQEDQFLRA YKFRDTGNVTLQGYVVSDIHGTWLQPISVTFQHTLSTRTVDRINFDANRCSAQGCMHREDIVFEFTAEELNQVIEDMETK GETVLVFRIQGRSGVDRDGRFHINELKAFRQAVTRELF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22618; Mature: 22487
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFRTILLAAPALMLALTGCAVTETLEERETAFLTRATPDFAAGIKVIDDPLNPTIEINT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHCCCEEEECCCCCEEEEEE IAAYQDYQFSWGPQEDQFLRAYKFRDTGNVTLQGYVVSDIHGTWLQPISVTFQHTLSTRT EEEEECCCCCCCCCHHHHHHHEEECCCCCEEEEEEEEECCCCCCCCHHHEEEEHHHCCCC VDRINFDANRCSAQGCMHREDIVFEFTAEELNQVIEDMETKGETVLVFRIQGRSGVDRDG CEEECCCCHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC RFHINELKAFRQAVTRELF CEEHHHHHHHHHHHHHHCC >Mature Secondary Structure TFRTILLAAPALMLALTGCAVTETLEERETAFLTRATPDFAAGIKVIDDPLNPTIEINT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHCCCEEEECCCCCEEEEEE IAAYQDYQFSWGPQEDQFLRAYKFRDTGNVTLQGYVVSDIHGTWLQPISVTFQHTLSTRT EEEEECCCCCCCCCHHHHHHHEEECCCCCEEEEEEEEECCCCCCCCHHHEEEEHHHCCCC VDRINFDANRCSAQGCMHREDIVFEFTAEELNQVIEDMETKGETVLVFRIQGRSGVDRDG CEEECCCCHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC RFHINELKAFRQAVTRELF CEEHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA