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The map label for this gene is ynaK [C]

Identifier: 114798140

GI number: 114798140

Start: 2697509

End: 2698861

Strand: Direct

Name: ynaK [C]

Synonym: HNE_2545

Alternate gene names: 114798140

Gene position: 2697509-2698861 (Clockwise)

Preceding gene: 114799813

Following gene: 114799253

Centisome position: 72.81

GC content: 57.72

Gene sequence:

>1353_bases
ATGACTCATGCCCAGAATGCACAGCCCGAACGCTGTGATCCGCTAAATAACTTTCCCACACCAACAATCATCCACGTCGC
GATCGCAGTTCTGATCGCCTACCCAAGGTCTGCCCGGCGCCACACGGCCAGCAAGCTCAAAAAGCTGATCAAATCTATCC
AGGACATTGGCCTCCTGGATCCGATCATCATCGATGAAAGCAACATGATTCTCTCGGGGCATCTCCGGGTGGGGGCTTTC
AAGGCCATTGGCCTCGACAATATTCCGGCGATCCGGATCACCCATCTTTCACGTGATCAGAAAGCCGCCTTTGTTTTGCA
CGCCAACAAGATTGTTGAAGAAGGCAGCTGGGACAAAGGCATCCTGAAACAGGAACTCTCCATGCTCGTGGAGTTTGGCT
GCGACATCGATCTTGAAACCACCGGCTTCGATATCGGCGAGATCGATCTGGTCATTGGCAGCGATGAAGCCGCCGTCGAT
GAGGAGCCGCTGGTTCCTCCGCCTCCCGCGCAGGCCGTTACGCGGCCCGGAGATCTATGGATTATGGGCCAGCACCGGCT
TCTCTGCGGTAGTTGCCTTGAGCCATTGGATTGGCAGTGCCTGATGCGCGGTGAGCGCGCCCGTGTCTGCTTCACCGATC
CGCCCTATAATGTGAAGATCAAGGGGCATGTTTCTTCGAAGGACCATGACGAATTCGCCATGGGATCGAGCGAGATGTCA
CCCGAACAGTTTGTGGCGTTTCTCTATGGGGCGCTGGGTGGGGCGGTAGAGTGGAGCATCGATGGCGCCATCCACTATAT
CTGTATGGATCACCGGCACATGCGGGAGCTCTACGCGGCCGCCGATCCCCTCTACTCCGCCCAGCTCAATCTCTGCGTCT
GGGCCAAGACCAATGGCGGGATGGGCTCCTTCTATAGAAGTCGGCATGAGCTCGTCGCGGTCTACAAAGTTGGGACTGCG
CCACACATTAATAATGTCCAGCTCGGTCGCTTCGGCCGGAACCGTACGAACGTCTGGTCATATGCCGGCGCCAACACGTT
CCGGAAAGGTCGGGACAAGGACATTGCCGATCACCCTACCGTTAAACCGGTGACCATGGTTGCCGACGCGATCATGGATG
CTTCGGCGCCGGGCGACATCTGTATTGATGGCTTTGGGGGCTCGGGCACGCTCATCCTGGCGGCGGAGCGAACCAACCGT
GTTGCCAGAGTCATCGAACTCGAGCCGAAATACTGTGACGTTGCAGTTCGGCGCTGGGAAGAAATGACCGGACGCCAGGC
TGTTCTGGACCGGACGGGGAAAAACCCGCCAGCCCTTTTTCTGCCTCCTCCGGGTAAGGAGGGCGCAGCATGA

Upstream 100 bases:

>100_bases
TCTGAAGACTGTTCCAAGGACGGGTCAGCTATGTGTAGCGCCCGTCCTTTTTTCATGGACGCTGCATGTAGCTGACCCAT
CCCCTGCTTCGGAGGATGCA

Downstream 100 bases:

>100_bases
GCAACCCTCCGATCGGTTACGGCAAGCCGCCGAAGAAATCGCAATACAAGCCGGGCCAGTCTGGCAATCCCAAGGGCCGT
CCGAAAGGGGCAAAATCCCT

Product: DNA methylase

Products: NA

Alternate protein names: DNA Methylase N-4/N-6 Domain Protein; Nuclease; DNA Methylase; DNA Methylase; ParB Domain Protein Nuclease; Prophage; Adenine Methyltransferase; DNA-Methyltransferase; Methylase DpnIIB; ParB Domain-Containing Protein Nuclease; ParB Family DNA Methylase; DNA Methylase Protein; Chromosome Partitioning Protein ParB; ParB-Like Nuclease Domain Family; ParB Family Protein; Phage Related DNA Methyltransferase; Adn Methyltransferase Protein; DNA Methylase Family Protein; ParB-Like Nuclease; Phage Associated Protein; Transcriptional Regulator; Chromosome Partitioning ParB Family Protein; Phage DNA Methylase; Methylase HpaI; Prophage LambdaW1 DNA Methylase; Phage Related DNA Methylase; Site-Specific DNA-Methyltransferase; Adenine-Specific Methyltransferase; Adenine Specific DNA Methyltransferase; Fragment Of Site-Specific DNA-Methyltransferase; Phage Methyltransferase; Methylase

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MTHAQNAQPERCDPLNNFPTPTIIHVAIAVLIAYPRSARRHTASKLKKLIKSIQDIGLLDPIIIDESNMILSGHLRVGAF
KAIGLDNIPAIRITHLSRDQKAAFVLHANKIVEEGSWDKGILKQELSMLVEFGCDIDLETTGFDIGEIDLVIGSDEAAVD
EEPLVPPPPAQAVTRPGDLWIMGQHRLLCGSCLEPLDWQCLMRGERARVCFTDPPYNVKIKGHVSSKDHDEFAMGSSEMS
PEQFVAFLYGALGGAVEWSIDGAIHYICMDHRHMRELYAAADPLYSAQLNLCVWAKTNGGMGSFYRSRHELVAVYKVGTA
PHINNVQLGRFGRNRTNVWSYAGANTFRKGRDKDIADHPTVKPVTMVADAIMDASAPGDICIDGFGGSGTLILAAERTNR
VARVIELEPKYCDVAVRRWEEMTGRQAVLDRTGKNPPALFLPPPGKEGAA

Sequences:

>Translated_450_residues
MTHAQNAQPERCDPLNNFPTPTIIHVAIAVLIAYPRSARRHTASKLKKLIKSIQDIGLLDPIIIDESNMILSGHLRVGAF
KAIGLDNIPAIRITHLSRDQKAAFVLHANKIVEEGSWDKGILKQELSMLVEFGCDIDLETTGFDIGEIDLVIGSDEAAVD
EEPLVPPPPAQAVTRPGDLWIMGQHRLLCGSCLEPLDWQCLMRGERARVCFTDPPYNVKIKGHVSSKDHDEFAMGSSEMS
PEQFVAFLYGALGGAVEWSIDGAIHYICMDHRHMRELYAAADPLYSAQLNLCVWAKTNGGMGSFYRSRHELVAVYKVGTA
PHINNVQLGRFGRNRTNVWSYAGANTFRKGRDKDIADHPTVKPVTMVADAIMDASAPGDICIDGFGGSGTLILAAERTNR
VARVIELEPKYCDVAVRRWEEMTGRQAVLDRTGKNPPALFLPPPGKEGAA
>Mature_449_residues
THAQNAQPERCDPLNNFPTPTIIHVAIAVLIAYPRSARRHTASKLKKLIKSIQDIGLLDPIIIDESNMILSGHLRVGAFK
AIGLDNIPAIRITHLSRDQKAAFVLHANKIVEEGSWDKGILKQELSMLVEFGCDIDLETTGFDIGEIDLVIGSDEAAVDE
EPLVPPPPAQAVTRPGDLWIMGQHRLLCGSCLEPLDWQCLMRGERARVCFTDPPYNVKIKGHVSSKDHDEFAMGSSEMSP
EQFVAFLYGALGGAVEWSIDGAIHYICMDHRHMRELYAAADPLYSAQLNLCVWAKTNGGMGSFYRSRHELVAVYKVGTAP
HINNVQLGRFGRNRTNVWSYAGANTFRKGRDKDIADHPTVKPVTMVADAIMDASAPGDICIDGFGGSGTLILAAERTNRV
ARVIELEPKYCDVAVRRWEEMTGRQAVLDRTGKNPPALFLPPPGKEGAA

Specific function: Unknown

COG id: COG0863

COG function: function code L; DNA modification methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49450; Mature: 49319

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHAQNAQPERCDPLNNFPTPTIIHVAIAVLIAYPRSARRHTASKLKKLIKSIQDIGLLD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
PIIIDESNMILSGHLRVGAFKAIGLDNIPAIRITHLSRDQKAAFVLHANKIVEEGSWDKG
CEEECCCCEEEEECEEEEEEEEECCCCCCEEEEEECCCCCCEEEEEEEHHHHHCCCCCHH
ILKQELSMLVEFGCDIDLETTGFDIGEIDLVIGSDEAAVDEEPLVPPPPAQAVTRPGDLW
HHHHHHHHHHHHCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCEE
IMGQHRLLCGSCLEPLDWQCLMRGERARVCFTDPPYNVKIKGHVSSKDHDEFAMGSSEMS
EEECCCCHHHHHCCCCCHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCCHHHCCCCCCC
PEQFVAFLYGALGGAVEWSIDGAIHYICMDHRHMRELYAAADPLYSAQLNLCVWAKTNGG
HHHHHHHHHHHHCCCEEEEECCEEEEEEECHHHHHHHHHHCCCCEEEEEEEEEEEECCCC
MGSFYRSRHELVAVYKVGTAPHINNVQLGRFGRNRTNVWSYAGANTFRKGRDKDIADHPT
CHHHHHCCCEEEEEEEECCCCCCCCEEECCCCCCCCCEEEECCCCHHCCCCCCCCCCCCC
VKPVTMVADAIMDASAPGDICIDGFGGSGTLILAAERTNRVARVIELEPKYCDVAVRRWE
CCHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHH
EMTGRQAVLDRTGKNPPALFLPPPGKEGAA
HHCCHHHHHHCCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure 
THAQNAQPERCDPLNNFPTPTIIHVAIAVLIAYPRSARRHTASKLKKLIKSIQDIGLLD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
PIIIDESNMILSGHLRVGAFKAIGLDNIPAIRITHLSRDQKAAFVLHANKIVEEGSWDKG
CEEECCCCEEEEECEEEEEEEEECCCCCCEEEEEECCCCCCEEEEEEEHHHHHCCCCCHH
ILKQELSMLVEFGCDIDLETTGFDIGEIDLVIGSDEAAVDEEPLVPPPPAQAVTRPGDLW
HHHHHHHHHHHHCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCEE
IMGQHRLLCGSCLEPLDWQCLMRGERARVCFTDPPYNVKIKGHVSSKDHDEFAMGSSEMS
EEECCCCHHHHHCCCCCHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCCHHHCCCCCCC
PEQFVAFLYGALGGAVEWSIDGAIHYICMDHRHMRELYAAADPLYSAQLNLCVWAKTNGG
HHHHHHHHHHHHCCCEEEEECCEEEEEEECHHHHHHHHHHCCCCEEEEEEEEEEEECCCC
MGSFYRSRHELVAVYKVGTAPHINNVQLGRFGRNRTNVWSYAGANTFRKGRDKDIADHPT
CHHHHHCCCEEEEEEEECCCCCCCCEEECCCCCCCCCEEEECCCCHHCCCCCCCCCCCCC
VKPVTMVADAIMDASAPGDICIDGFGGSGTLILAAERTNRVARVIELEPKYCDVAVRRWE
CCHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHH
EMTGRQAVLDRTGKNPPALFLPPPGKEGAA
HHCCHHHHHHCCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA