| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799645
Identifier: 114799645
GI number: 114799645
Start: 3397538
End: 3398611
Strand: Direct
Name: 114799645
Synonym: HNE_3229
Alternate gene names: NA
Gene position: 3397538-3398611 (Clockwise)
Preceding gene: 114800364
Following gene: 114798425
Centisome position: 91.7
GC content: 67.04
Gene sequence:
>1074_bases ATGACAGATACTCCCCCACCCGGTCAGGAACCGCCCGGCGAGCCGATCGACGCTCATTTCGAGCCGGCGCCCGACCCCGT GCCCGCAAAGTCGAGCTCCGGCAGCCCCGGCTGGGGCGGGGTTGCGCTTGCCGCTGGCCTCGCGGCCCTTGCGGGCGCCG CTGGCGGCATCTTCGGGCACGACATGATCCTGCCCGGCAAAACTGCAGCTCTGGAAGCCCAGGTTGCCGGTCTTGAAGCG CAGCAAGCGGAGTTCGAGCGCCTCATCAGTGAAATGCCCGAAGCCTCTGATGAACTTTCTGGCCTGATCGGTGACGTCAG CGCCAATTCCAGAAAACTCAACGAACTGCTGGCCAGCGGCGCAGGAATCCCCGCCGTCGAAACGCTCGCTGCCCGGATCG ACGCGCTGGAAAGCATAGAGCCCGGCGAAGGCGCCACACCGGCCGAAGCCCTGCGCACGATCACCGCTCTGGAAGCGCGC CTCGCCGCGATGGAAGAAGCCGCTGCTACTGCGGCGGCAACACCAGTGGCGCCTCCGGAACCAGTGGCTGAACCGGAAGA GGACCGTCAGGCAGAGGCCGCCCTCGCCCTCTCAGCCATCGAAAGCGCCGCCCGCCGGGGTACAGGCTTTGAGGCGGATT ACCGCACGCTGCGCGCTGCGGCGCCCTCAAACCAGACCGTGCGGCGCCTTTCCCCCTACATCACCGGCGTGCCGACAACT TCGAAACTGCAGGCAGACTTTGCCACCATGCGAACGGCTGTCACAGCTGCCGGCAAGGCCGACGCGGCCGCCGAAACACC GCAGAGTCAGCTTTCCTGGCTCAATCGTGTTTTTGGAGACGCCGTCACCGTGCGCCCCGCCAACAAGCGCGAGAACCCGG TCACGGCCGCGCTGGACACTTCGGCCAAGGCGCTTGCCGCCGGAGACTTGCCAGCCAGCGTCAAAGCCCTCTCAACCCTC GACGGCACTGCCGCCCGCGCGGCGCAGGACTGGACCCGCGAAGCAAACCGCCGCATCACGCTGGAGGCGGTGCTCGAAGA TGTCAGGCTGAGCCTGGTCGAGCCGGAGAACTAA
Upstream 100 bases:
>100_bases TGAAGAAGCGGCCACCTCGCTGCGCGCCTGAGGCGCCTGCTTTGCCGTAGAGGCGCGGTGTGCCACACTCATGCCCAAGA GTTAGACCACCGAAGGCGAC
Downstream 100 bases:
>100_bases GAAGAATGAGCCGGTTTTTTCTTTTCATTTTCGTCCTTCTGCTGATTTCCATCGGCGCAGTGCTGGCCTGGTGGGCCTTC AGCCTGCCCGGTGAAGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MTDTPPPGQEPPGEPIDAHFEPAPDPVPAKSSSGSPGWGGVALAAGLAALAGAAGGIFGHDMILPGKTAALEAQVAGLEA QQAEFERLISEMPEASDELSGLIGDVSANSRKLNELLASGAGIPAVETLAARIDALESIEPGEGATPAEALRTITALEAR LAAMEEAAATAAATPVAPPEPVAEPEEDRQAEAALALSAIESAARRGTGFEADYRTLRAAAPSNQTVRRLSPYITGVPTT SKLQADFATMRTAVTAAGKADAAAETPQSQLSWLNRVFGDAVTVRPANKRENPVTAALDTSAKALAAGDLPASVKALSTL DGTAARAAQDWTREANRRITLEAVLEDVRLSLVEPEN
Sequences:
>Translated_357_residues MTDTPPPGQEPPGEPIDAHFEPAPDPVPAKSSSGSPGWGGVALAAGLAALAGAAGGIFGHDMILPGKTAALEAQVAGLEA QQAEFERLISEMPEASDELSGLIGDVSANSRKLNELLASGAGIPAVETLAARIDALESIEPGEGATPAEALRTITALEAR LAAMEEAAATAAATPVAPPEPVAEPEEDRQAEAALALSAIESAARRGTGFEADYRTLRAAAPSNQTVRRLSPYITGVPTT SKLQADFATMRTAVTAAGKADAAAETPQSQLSWLNRVFGDAVTVRPANKRENPVTAALDTSAKALAAGDLPASVKALSTL DGTAARAAQDWTREANRRITLEAVLEDVRLSLVEPEN >Mature_356_residues TDTPPPGQEPPGEPIDAHFEPAPDPVPAKSSSGSPGWGGVALAAGLAALAGAAGGIFGHDMILPGKTAALEAQVAGLEAQ QAEFERLISEMPEASDELSGLIGDVSANSRKLNELLASGAGIPAVETLAARIDALESIEPGEGATPAEALRTITALEARL AAMEEAAATAAATPVAPPEPVAEPEEDRQAEAALALSAIESAARRGTGFEADYRTLRAAAPSNQTVRRLSPYITGVPTTS KLQADFATMRTAVTAAGKADAAAETPQSQLSWLNRVFGDAVTVRPANKRENPVTAALDTSAKALAAGDLPASVKALSTLD GTAARAAQDWTREANRRITLEAVLEDVRLSLVEPEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36556; Mature: 36425
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTPPPGQEPPGEPIDAHFEPAPDPVPAKSSSGSPGWGGVALAAGLAALAGAAGGIFGH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC DMILPGKTAALEAQVAGLEAQQAEFERLISEMPEASDELSGLIGDVSANSRKLNELLASG CEECCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCC AGIPAVETLAARIDALESIEPGEGATPAEALRTITALEARLAAMEEAAATAAATPVAPPE CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PVAEPEEDRQAEAALALSAIESAARRGTGFEADYRTLRAAAPSNQTVRRLSPYITGVPTT CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCC SKLQADFATMRTAVTAAGKADAAAETPQSQLSWLNRVFGDAVTVRPANKRENPVTAALDT HHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHCCCEEECCCCCCCCCCEEECCC SAKALAAGDLPASVKALSTLDGTAARAAQDWTREANRRITLEAVLEDVRLSLVEPEN CCHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TDTPPPGQEPPGEPIDAHFEPAPDPVPAKSSSGSPGWGGVALAAGLAALAGAAGGIFGH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC DMILPGKTAALEAQVAGLEAQQAEFERLISEMPEASDELSGLIGDVSANSRKLNELLASG CEECCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCC AGIPAVETLAARIDALESIEPGEGATPAEALRTITALEARLAAMEEAAATAAATPVAPPE CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PVAEPEEDRQAEAALALSAIESAARRGTGFEADYRTLRAAAPSNQTVRRLSPYITGVPTT CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCC SKLQADFATMRTAVTAAGKADAAAETPQSQLSWLNRVFGDAVTVRPANKRENPVTAALDT HHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHCCCEEECCCCCCCCCCEEECCC SAKALAAGDLPASVKALSTLDGTAARAAQDWTREANRRITLEAVLEDVRLSLVEPEN CCHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA