Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114799629

Identifier: 114799629

GI number: 114799629

Start: 1630706

End: 1632163

Strand: Reverse

Name: 114799629

Synonym: HNE_1599

Alternate gene names: NA

Gene position: 1632163-1630706 (Counterclockwise)

Preceding gene: 114799182

Following gene: 114800432

Centisome position: 44.05

GC content: 52.47

Gene sequence:

>1458_bases
TTGGTAGTCTGCAATCGCATCTACCATTCGCCGTACTGGCAAACATTTCACGACTTTTTGAAGGAGTTTCTGTTCTCCCT
TCTGGGGCGAGAGTGGCTCCGCGAGGAAACTGCTAAGGCACCGGAAATCCAACACCCTATTGCTCGCTGGGTTGTGATGG
CCCAAGCGGACGTGACTCCTGTGCCGATCATCAATGGCCTGCGGCATGGTGATATGACCGGCGCGATGAAAGCATTCATG
CAACTTGCTTACAATCTGTACCTGATCGCTCACAACTCGCCCCCTGACGATGCGTTTGATCGTGTTCGTGGATACATTGC
GCGGCTTAAGCAAAGGCATTTCGGGAATTTCCTGGGCGCACTGTATGAGACCTATGCCGCTGCGGCCTTTCTTAAAGCTG
GATTTAATATTCAGTATGAAGAGGAACACAAGGGTGAGAGACGCTATACTGAGTTCGTGGCAGTGTACCCGCAGACTGGC
CGGACATTCTCGGTGGAGGCAAAGGCGAGGGATTCTTCTGGGGCGCCGCAGGATGACGAAGTTAAGCGACTGAGGGTGAA
AAGTAAGTTAATCAGTGCGCTGAATAAATATTCAGAACATGAGCGTATTGTGATGATTGAACTGAATGTGCCTGACGAGG
TGGGCGAGGACTTTGCAAACCAGTGGCCCGCAGCAGCGATGGATCAAATTCGGTCGGCGGAAGGGCTTACGAAAAACGAC
GGGCAAGAGTTTGATCCTGCCTACGTAATCGTCACCAATCACAACTATCACTCCCGGCTGGATGCCCGCGTGCAAACGCA
AGCTTTGGGCTTTGGGTACAAAATTCCGGATTTTGCACCCGCCGTGCCAATCTCTAGCTTCTATGAGTACGTGTGTTCGC
AAGAGAGGCATTTGGAAATTGATGCGCTCATGAATTCTTTGAAAGACCACTCTCATATTCCCGCGACCTTTGACGGCGAG
CAGCCGGAATTGGCATTCGATCCGGACCAGCGCCCGAGGCTGAAGGTTGGTGAGATTTATGAAATCCCATCTGTCGATGG
TGATCCGGTCGCAGGTTTGCTGGAGAGCGGGACGGTGATTGAATCGCAGCAATTGGCGTATTGTGTGCACCGCTTGGAAA
ATGGCACCCGCATTCTCGCGACGCACCCTTTGTCAGACTCGGAAATGATCGTCTGGCGGCGTAATCCGTCGATTTTCTTC
GGCGAGGAAGATCGAATTAAGAAGCCAGCGGAGTCACCGCTCGACTTCGCCATATTCCTGTATGAATCCTACAAGAATAC
CGACCGCACCAAATTAGAAGAGTGGCTTTCGCCGTGGGTGCCAGCGGCTGCGTTGGCGGAAATGGATCAAAAGCAGTTAG
CCGCGAGGTATTGCGAGGGCATGGCAATGCAAATGTGGAAGACGACACAAGCAAACAAACCTGGTGGAAAAGTCAGTGGG
GACTCCGCTGGGGACTGA

Upstream 100 bases:

>100_bases
GGCTAAGGCGCTTGGCGCGAAAATCCAAAAAGCAGCGCACCAGAGAGAACAGGGGTTCGGTAAGCCGATTATTTCTGTCG
AAGCGTCCGGTCAGCGCTTA

Downstream 100 bases:

>100_bases
AAAGTCAAAACCTGTTTTTGTTGCTGGGGGATGGTGCCCCGGGGCAGAGAACACCGCCCCAGACCAGCGGGAAGGCAAGC
GTAATCGTCCTCGCATGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MVVCNRIYHSPYWQTFHDFLKEFLFSLLGREWLREETAKAPEIQHPIARWVVMAQADVTPVPIINGLRHGDMTGAMKAFM
QLAYNLYLIAHNSPPDDAFDRVRGYIARLKQRHFGNFLGALYETYAAAAFLKAGFNIQYEEEHKGERRYTEFVAVYPQTG
RTFSVEAKARDSSGAPQDDEVKRLRVKSKLISALNKYSEHERIVMIELNVPDEVGEDFANQWPAAAMDQIRSAEGLTKND
GQEFDPAYVIVTNHNYHSRLDARVQTQALGFGYKIPDFAPAVPISSFYEYVCSQERHLEIDALMNSLKDHSHIPATFDGE
QPELAFDPDQRPRLKVGEIYEIPSVDGDPVAGLLESGTVIESQQLAYCVHRLENGTRILATHPLSDSEMIVWRRNPSIFF
GEEDRIKKPAESPLDFAIFLYESYKNTDRTKLEEWLSPWVPAAALAEMDQKQLAARYCEGMAMQMWKTTQANKPGGKVSG
DSAGD

Sequences:

>Translated_485_residues
MVVCNRIYHSPYWQTFHDFLKEFLFSLLGREWLREETAKAPEIQHPIARWVVMAQADVTPVPIINGLRHGDMTGAMKAFM
QLAYNLYLIAHNSPPDDAFDRVRGYIARLKQRHFGNFLGALYETYAAAAFLKAGFNIQYEEEHKGERRYTEFVAVYPQTG
RTFSVEAKARDSSGAPQDDEVKRLRVKSKLISALNKYSEHERIVMIELNVPDEVGEDFANQWPAAAMDQIRSAEGLTKND
GQEFDPAYVIVTNHNYHSRLDARVQTQALGFGYKIPDFAPAVPISSFYEYVCSQERHLEIDALMNSLKDHSHIPATFDGE
QPELAFDPDQRPRLKVGEIYEIPSVDGDPVAGLLESGTVIESQQLAYCVHRLENGTRILATHPLSDSEMIVWRRNPSIFF
GEEDRIKKPAESPLDFAIFLYESYKNTDRTKLEEWLSPWVPAAALAEMDQKQLAARYCEGMAMQMWKTTQANKPGGKVSG
DSAGD
>Mature_485_residues
MVVCNRIYHSPYWQTFHDFLKEFLFSLLGREWLREETAKAPEIQHPIARWVVMAQADVTPVPIINGLRHGDMTGAMKAFM
QLAYNLYLIAHNSPPDDAFDRVRGYIARLKQRHFGNFLGALYETYAAAAFLKAGFNIQYEEEHKGERRYTEFVAVYPQTG
RTFSVEAKARDSSGAPQDDEVKRLRVKSKLISALNKYSEHERIVMIELNVPDEVGEDFANQWPAAAMDQIRSAEGLTKND
GQEFDPAYVIVTNHNYHSRLDARVQTQALGFGYKIPDFAPAVPISSFYEYVCSQERHLEIDALMNSLKDHSHIPATFDGE
QPELAFDPDQRPRLKVGEIYEIPSVDGDPVAGLLESGTVIESQQLAYCVHRLENGTRILATHPLSDSEMIVWRRNPSIFF
GEEDRIKKPAESPLDFAIFLYESYKNTDRTKLEEWLSPWVPAAALAEMDQKQLAARYCEGMAMQMWKTTQANKPGGKVSG
DSAGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55083; Mature: 55083

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVCNRIYHSPYWQTFHDFLKEFLFSLLGREWLREETAKAPEIQHPIARWVVMAQADVTP
CEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC
VPIINGLRHGDMTGAMKAFMQLAYNLYLIAHNSPPDDAFDRVRGYIARLKQRHFGNFLGA
CHHHCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LYETYAAAAFLKAGFNIQYEEEHKGERRYTEFVAVYPQTGRTFSVEAKARDSSGAPQDDE
HHHHHHHHHHHHHCCCCEECHHHCCHHHEEEEEEEECCCCCEEEEEECCCCCCCCCCCHH
VKRLRVKSKLISALNKYSEHERIVMIELNVPDEVGEDFANQWPAAAMDQIRSAEGLTKND
HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
GQEFDPAYVIVTNHNYHSRLDARVQTQALGFGYKIPDFAPAVPISSFYEYVCSQERHLEI
CCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEH
DALMNSLKDHSHIPATFDGEQPELAFDPDQRPRLKVGEIYEIPSVDGDPVAGLLESGTVI
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHCCCCEE
ESQQLAYCVHRLENGTRILATHPLSDSEMIVWRRNPSIFFGEEDRIKKPAESPLDFAIFL
CHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCEEECCHHHCCCCCCCCCCEEEEE
YESYKNTDRTKLEEWLSPWVPAAALAEMDQKQLAARYCEGMAMQMWKTTQANKPGGKVSG
EHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DSAGD
CCCCC
>Mature Secondary Structure
MVVCNRIYHSPYWQTFHDFLKEFLFSLLGREWLREETAKAPEIQHPIARWVVMAQADVTP
CEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC
VPIINGLRHGDMTGAMKAFMQLAYNLYLIAHNSPPDDAFDRVRGYIARLKQRHFGNFLGA
CHHHCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LYETYAAAAFLKAGFNIQYEEEHKGERRYTEFVAVYPQTGRTFSVEAKARDSSGAPQDDE
HHHHHHHHHHHHHCCCCEECHHHCCHHHEEEEEEEECCCCCEEEEEECCCCCCCCCCCHH
VKRLRVKSKLISALNKYSEHERIVMIELNVPDEVGEDFANQWPAAAMDQIRSAEGLTKND
HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
GQEFDPAYVIVTNHNYHSRLDARVQTQALGFGYKIPDFAPAVPISSFYEYVCSQERHLEI
CCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEH
DALMNSLKDHSHIPATFDGEQPELAFDPDQRPRLKVGEIYEIPSVDGDPVAGLLESGTVI
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHCCCCEE
ESQQLAYCVHRLENGTRILATHPLSDSEMIVWRRNPSIFFGEEDRIKKPAESPLDFAIFL
CHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCEEECCHHHCCCCCCCCCCEEEEE
YESYKNTDRTKLEEWLSPWVPAAALAEMDQKQLAARYCEGMAMQMWKTTQANKPGGKVSG
EHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DSAGD
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA