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The map label for this gene is viuA [H]

Identifier: 114799619

GI number: 114799619

Start: 1091023

End: 1093479

Strand: Direct

Name: viuA [H]

Synonym: HNE_1084

Alternate gene names: 114799619

Gene position: 1091023-1093479 (Clockwise)

Preceding gene: 114800160

Following gene: 114800341

Centisome position: 29.45

GC content: 60.4

Gene sequence:

>2457_bases
ATGAACAAGGCAATTCTATTGGCTGGCGCAGCGGCTTTGGCGATGACCGTTCAGGCATCACCGGGTTTCGCGCAGGAGGC
ATCTGAAGATGCGGAGCTGAAGCAGGACGTTATCGTCGTCAGCGCTCGCAAGAAGGAGGAGGGGCTTCTGGAGGCGCCCG
TCGCGGTCAGCGCGTTCAGCGAAGAAACCCTGGAGAACCTTCAGCTGGAATCGGTCGATGATATTGCCCGTTTCACGCCG
GGGCTCTCGTTCGGAAAGGCATTTGGCCGCTCTACCGAGCGTCCGGTCATCCGCGGGCAATCCAACGTGCTTGCCGGGGT
TCAGTTCGGGGTCGAGTCCGGTACGGCCTACTTTATTGACGGCGTCTACTATTCCGGTTCGATCCAGAACCTTGATCCGA
ATGACCTTCAGCGCGTCGAAGTGATCAAAGGCCCGCAATCGGCGCTTTATGGGCGCAATACCTATGCCGGCGCGATCAAC
TTCATCACCAAGGGCGGCACGGACACCTTTGAGGCGACCGGCAAGCTGCGCGCGGGCAACAATGATACGGCTGAATATGC
GGCGTCGATCGCCGGGCCGATCTTTCCGGGGCTGACCGGGCGTTTGAGCTTCCGGGATTATGAGTATGGCGGCGAGCACG
AGAACTCCGTGACCGGCGAACTCGTCGGGCAGGAGAAAACCACCAGCCTTGCCGGTGTTCTGGACTGGGCGCCGGTCTCC
AACTTCGATTCGCGCCTGCGGGTGAGCTTCAGCGAGGACCGCGACGGCGTGCTGCCGCTGTTCCTGCAGTCTGCGGAGGA
AAACAACTGTCTGCCGGGGTATCGCTCGCTGGCCTTCTGGCCCCTGTCGGGCAGCACCAATACCAACCAGTATTATTGCG
GGGTCATCAAGCCGGGGCAGGTGGCGGTGAATTCCGGCGTGGATGCGGACGGCGTGCCAAATGTGGTGCCCGGCGCGCCG
CTGAACTCGACCTTTCCGTTCTTTGCGGGGGCGTATGGCCTCGGCGACGGTACGGCATTCGACGGAATTACGCGCGATCT
CTGGGTCGCCAGTTCGGTATCAACCTATCGGTTCGGCGATGCCGGATGGGAAGCGAGCCTTCTGGCGGGCTATTCGAAGG
AGCATAACAAGCAGGGGTATGATTCCGATCACTCCTCGGTGAACTTCTTCCTGGCAGGGCCAACGCAGGAGCCGTTCTTC
GCCAACACCACGCGCAAGGATATTGAGGACTACAGCATCGAGGCGCAGATTGCGTCGCCGCAGGACCTGCGTCTGCGCGG
GATGCTGGGTGTGTATCTCTATGACCAGCTTTTCTATGAAGGCGACATTACGTTTGCAGACCCATCGGGCCGCTCGGCGG
ATACGGGAAAGCGCACCATTCGCAATGAAGCCATCTTTGGCCTGGTTGAGTTTGATTTTACCGACCGCCTGACGGCAACC
CTTGAAGGGCGGTATGCGGAAGAAACCAAGACCGACCGCACATCGACGGTAACGCCGGAGGTTTCCTACAGCAAATTCAC
TCCGCGCCTGACCGTTGACTATGATCTGGGCAATGGCGGGACGATCTATGCTGTTGTCGCTCAGGGTGTGAAGCCGGGCG
GCATCAACGGCGCGATCGGGGAAGCGGTTGGCATGCCGACATACAAGCAGGAAGAGTCAGACAATTTTGAAGTCGGCCTG
AAAACGCCGCTGCCGGATGTCGGCCTGGGTGATTGGAGTGTCTCGATGGCAGGCTACTTCACCGACGCGACCAATGTGCA
GCTTACGTCGGCCGTTGCGGCGACATCGGGCGCGATCAACTCCATCGCCACCAACCAGGGCGCCGGCGAGATCAAGGGCC
TTGAGATCGACCTCAATGGCGCGGTGAACGACATCCTCAGCGGCGGGTTCACCTATGCCTGGACGGATGCGAAGTTTACC
GAAGGCTGTGACGCCGACGAGTGGACCATGACATCGGGCGGCGGGGTTCTGACAGACCCCGATAATCAGACGGGCACCGA
TTTCAGCGGTCTGTTTCCGGGCGCCGGTCCGGCATCCTGCTCAATTGCCGGGCGGACTTTTCCTCTGACTTCGGAGCATC
AGGCGAGCGTGTTCGCGCGGCTTGATTTCCGGGAGGCCGGTCCGTTTGGATCTGACTTCTTCGTGTCGAGTGATCTAACC
TATGAGAGCTCGAAATTTGTACAGATCCACAATCAGGCGGAAACCGGCGACGCGACCCTGCTGGGGGCCCGGTTCGGCTT
CGAGACGGATCGGTGGACGATTGCCGCTTACGGTCAGAATATTACGGATGAGGATTCCATTGTGGTCGCCACGCGCTGGC
TGCAGGGACCTTACTTCTCAGCGGGCTTCAGCCCGAATGTAGCGCCTACGACCGCTTCTCGTGGCGCGCCGCGTGCTTAT
TTCGGTTCGCTTCGCCGCGGACCGCAATATGGCGCGGAGCTGCGTGTCCGCTTCTGA

Upstream 100 bases:

>100_bases
GCCAAGCATGCGAACGCGACTGACTGTAAATGGTATATCATTTAATGTCGCTGTCGAGAGATAGCGTAGCGCACAGAATG
ACGCACTGGGGAGATACAAA

Downstream 100 bases:

>100_bases
TCGGGCACATGGCGTAAAACTTGGCGGCGTTGGGCATCCCGTCCCGGCGCCGCCTCCTTTTTTTGGCCGGACCAGTTCAC
GTTCCCCATGGCGGGGTGCC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 818; Mature: 818

Protein sequence:

>818_residues
MNKAILLAGAAALAMTVQASPGFAQEASEDAELKQDVIVVSARKKEEGLLEAPVAVSAFSEETLENLQLESVDDIARFTP
GLSFGKAFGRSTERPVIRGQSNVLAGVQFGVESGTAYFIDGVYYSGSIQNLDPNDLQRVEVIKGPQSALYGRNTYAGAIN
FITKGGTDTFEATGKLRAGNNDTAEYAASIAGPIFPGLTGRLSFRDYEYGGEHENSVTGELVGQEKTTSLAGVLDWAPVS
NFDSRLRVSFSEDRDGVLPLFLQSAEENNCLPGYRSLAFWPLSGSTNTNQYYCGVIKPGQVAVNSGVDADGVPNVVPGAP
LNSTFPFFAGAYGLGDGTAFDGITRDLWVASSVSTYRFGDAGWEASLLAGYSKEHNKQGYDSDHSSVNFFLAGPTQEPFF
ANTTRKDIEDYSIEAQIASPQDLRLRGMLGVYLYDQLFYEGDITFADPSGRSADTGKRTIRNEAIFGLVEFDFTDRLTAT
LEGRYAEETKTDRTSTVTPEVSYSKFTPRLTVDYDLGNGGTIYAVVAQGVKPGGINGAIGEAVGMPTYKQEESDNFEVGL
KTPLPDVGLGDWSVSMAGYFTDATNVQLTSAVAATSGAINSIATNQGAGEIKGLEIDLNGAVNDILSGGFTYAWTDAKFT
EGCDADEWTMTSGGGVLTDPDNQTGTDFSGLFPGAGPASCSIAGRTFPLTSEHQASVFARLDFREAGPFGSDFFVSSDLT
YESSKFVQIHNQAETGDATLLGARFGFETDRWTIAAYGQNITDEDSIVVATRWLQGPYFSAGFSPNVAPTTASRGAPRAY
FGSLRRGPQYGAELRVRF

Sequences:

>Translated_818_residues
MNKAILLAGAAALAMTVQASPGFAQEASEDAELKQDVIVVSARKKEEGLLEAPVAVSAFSEETLENLQLESVDDIARFTP
GLSFGKAFGRSTERPVIRGQSNVLAGVQFGVESGTAYFIDGVYYSGSIQNLDPNDLQRVEVIKGPQSALYGRNTYAGAIN
FITKGGTDTFEATGKLRAGNNDTAEYAASIAGPIFPGLTGRLSFRDYEYGGEHENSVTGELVGQEKTTSLAGVLDWAPVS
NFDSRLRVSFSEDRDGVLPLFLQSAEENNCLPGYRSLAFWPLSGSTNTNQYYCGVIKPGQVAVNSGVDADGVPNVVPGAP
LNSTFPFFAGAYGLGDGTAFDGITRDLWVASSVSTYRFGDAGWEASLLAGYSKEHNKQGYDSDHSSVNFFLAGPTQEPFF
ANTTRKDIEDYSIEAQIASPQDLRLRGMLGVYLYDQLFYEGDITFADPSGRSADTGKRTIRNEAIFGLVEFDFTDRLTAT
LEGRYAEETKTDRTSTVTPEVSYSKFTPRLTVDYDLGNGGTIYAVVAQGVKPGGINGAIGEAVGMPTYKQEESDNFEVGL
KTPLPDVGLGDWSVSMAGYFTDATNVQLTSAVAATSGAINSIATNQGAGEIKGLEIDLNGAVNDILSGGFTYAWTDAKFT
EGCDADEWTMTSGGGVLTDPDNQTGTDFSGLFPGAGPASCSIAGRTFPLTSEHQASVFARLDFREAGPFGSDFFVSSDLT
YESSKFVQIHNQAETGDATLLGARFGFETDRWTIAAYGQNITDEDSIVVATRWLQGPYFSAGFSPNVAPTTASRGAPRAY
FGSLRRGPQYGAELRVRF
>Mature_818_residues
MNKAILLAGAAALAMTVQASPGFAQEASEDAELKQDVIVVSARKKEEGLLEAPVAVSAFSEETLENLQLESVDDIARFTP
GLSFGKAFGRSTERPVIRGQSNVLAGVQFGVESGTAYFIDGVYYSGSIQNLDPNDLQRVEVIKGPQSALYGRNTYAGAIN
FITKGGTDTFEATGKLRAGNNDTAEYAASIAGPIFPGLTGRLSFRDYEYGGEHENSVTGELVGQEKTTSLAGVLDWAPVS
NFDSRLRVSFSEDRDGVLPLFLQSAEENNCLPGYRSLAFWPLSGSTNTNQYYCGVIKPGQVAVNSGVDADGVPNVVPGAP
LNSTFPFFAGAYGLGDGTAFDGITRDLWVASSVSTYRFGDAGWEASLLAGYSKEHNKQGYDSDHSSVNFFLAGPTQEPFF
ANTTRKDIEDYSIEAQIASPQDLRLRGMLGVYLYDQLFYEGDITFADPSGRSADTGKRTIRNEAIFGLVEFDFTDRLTAT
LEGRYAEETKTDRTSTVTPEVSYSKFTPRLTVDYDLGNGGTIYAVVAQGVKPGGINGAIGEAVGMPTYKQEESDNFEVGL
KTPLPDVGLGDWSVSMAGYFTDATNVQLTSAVAATSGAINSIATNQGAGEIKGLEIDLNGAVNDILSGGFTYAWTDAKFT
EGCDADEWTMTSGGGVLTDPDNQTGTDFSGLFPGAGPASCSIAGRTFPLTSEHQASVFARLDFREAGPFGSDFFVSSDLT
YESSKFVQIHNQAETGDATLLGARFGFETDRWTIAAYGQNITDEDSIVVATRWLQGPYFSAGFSPNVAPTTASRGAPRAY
FGSLRRGPQYGAELRVRF

Specific function: Receptor for ferric vibriobactin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1788478, Length=237, Percent_Identity=25.7383966244726, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug [H]

EC number: NA

Molecular weight: Translated: 87421; Mature: 87421

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKAILLAGAAALAMTVQASPGFAQEASEDAELKQDVIVVSARKKEEGLLEAPVAVSAFS
CCCEEEEECCEEEEEEEECCCCCHHHCCCHHHHCCCEEEEEECCCCCCCEECCEEEEHHH
EETLENLQLESVDDIARFTPGLSFGKAFGRSTERPVIRGQSNVLAGVQFGVESGTAYFID
HHHHHHCCCCCHHHHHHHCCCCHHHHHHCCCCCCCEEECCCCEEEEEEECCCCCCEEEEE
GVYYSGSIQNLDPNDLQRVEVIKGPQSALYGRNTYAGAINFITKGGTDTFEATGKLRAGN
EEEEECEECCCCCCCCEEEEEECCCHHHHCCCCCCCEEEEEEECCCCCCEECCCEEECCC
NDTAEYAASIAGPIFPGLTGRLSFRDYEYGGEHENSVTGELVGQEKTTSLAGVLDWAPVS
CCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCHHHHHHHEEECCCCC
NFDSRLRVSFSEDRDGVLPLFLQSAEENNCLPGYRSLAFWPLSGSTNTNQYYCGVIKPGQ
CCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCC
VAVNSGVDADGVPNVVPGAPLNSTFPFFAGAYGLGDGTAFDGITRDLWVASSVSTYRFGD
EEEECCCCCCCCCCCCCCCCCCCCCCHHHCCEECCCCCCCCCCCHHHEEECCCCEEECCC
AGWEASLLAGYSKEHNKQGYDSDHSSVNFFLAGPTQEPFFANTTRKDIEDYSIEAQIASP
CCCCHHHHCCCCHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHCCCCEEEEEEECCC
QDLRLRGMLGVYLYDQLFYEGDITFADPSGRSADTGKRTIRNEAIFGLVEFDFTDRLTAT
CCEEEEHHHHHHEEEHEEEECCEEEECCCCCCCCCCHHHHHCCEEEEEEEECCCCCEEEE
LEGRYAEETKTDRTSTVTPEVSYSKFTPRLTVDYDLGNGGTIYAVVAQGVKPGGINGAIG
ECCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCH
EAVGMPTYKQEESDNFEVGLKTPLPDVGLGDWSVSMAGYFTDATNVQLTSAVAATSGAIN
HHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEHHHHHHCCCHH
SIATNQGAGEIKGLEIDLNGAVNDILSGGFTYAWTDAKFTEGCDADEWTMTSGGGVLTDP
HHHCCCCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCCCCCCCCEEEECCCEEEECC
DNQTGTDFSGLFPGAGPASCSIAGRTFPLTSEHQASVFARLDFREAGPFGSDFFVSSDLT
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEHHHCCCCCCCEEEECCCC
YESSKFVQIHNQAETGDATLLGARFGFETDRWTIAAYGQNITDEDSIVVATRWLQGPYFS
CCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCC
AGFSPNVAPTTASRGAPRAYFGSLRRGPQYGAELRVRF
CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEC
>Mature Secondary Structure
MNKAILLAGAAALAMTVQASPGFAQEASEDAELKQDVIVVSARKKEEGLLEAPVAVSAFS
CCCEEEEECCEEEEEEEECCCCCHHHCCCHHHHCCCEEEEEECCCCCCCEECCEEEEHHH
EETLENLQLESVDDIARFTPGLSFGKAFGRSTERPVIRGQSNVLAGVQFGVESGTAYFID
HHHHHHCCCCCHHHHHHHCCCCHHHHHHCCCCCCCEEECCCCEEEEEEECCCCCCEEEEE
GVYYSGSIQNLDPNDLQRVEVIKGPQSALYGRNTYAGAINFITKGGTDTFEATGKLRAGN
EEEEECEECCCCCCCCEEEEEECCCHHHHCCCCCCCEEEEEEECCCCCCEECCCEEECCC
NDTAEYAASIAGPIFPGLTGRLSFRDYEYGGEHENSVTGELVGQEKTTSLAGVLDWAPVS
CCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCHHHHHHHEEECCCCC
NFDSRLRVSFSEDRDGVLPLFLQSAEENNCLPGYRSLAFWPLSGSTNTNQYYCGVIKPGQ
CCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCC
VAVNSGVDADGVPNVVPGAPLNSTFPFFAGAYGLGDGTAFDGITRDLWVASSVSTYRFGD
EEEECCCCCCCCCCCCCCCCCCCCCCHHHCCEECCCCCCCCCCCHHHEEECCCCEEECCC
AGWEASLLAGYSKEHNKQGYDSDHSSVNFFLAGPTQEPFFANTTRKDIEDYSIEAQIASP
CCCCHHHHCCCCHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHCCCCEEEEEEECCC
QDLRLRGMLGVYLYDQLFYEGDITFADPSGRSADTGKRTIRNEAIFGLVEFDFTDRLTAT
CCEEEEHHHHHHEEEHEEEECCEEEECCCCCCCCCCHHHHHCCEEEEEEEECCCCCEEEE
LEGRYAEETKTDRTSTVTPEVSYSKFTPRLTVDYDLGNGGTIYAVVAQGVKPGGINGAIG
ECCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCH
EAVGMPTYKQEESDNFEVGLKTPLPDVGLGDWSVSMAGYFTDATNVQLTSAVAATSGAIN
HHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEHHHHHHCCCHH
SIATNQGAGEIKGLEIDLNGAVNDILSGGFTYAWTDAKFTEGCDADEWTMTSGGGVLTDP
HHHCCCCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCCCCCCCCEEEECCCEEEECC
DNQTGTDFSGLFPGAGPASCSIAGRTFPLTSEHQASVFARLDFREAGPFGSDFFVSSDLT
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEHHHCCCCCCCEEEECCCC
YESSKFVQIHNQAETGDATLLGARFGFETDRWTIAAYGQNITDEDSIVVATRWLQGPYFS
CCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCC
AGFSPNVAPTTASRGAPRAYFGSLRRGPQYGAELRVRF
CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1317381 [H]