| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is yhjX [C]
Identifier: 114800341
GI number: 114800341
Start: 1093723
End: 1095294
Strand: Direct
Name: yhjX [C]
Synonym: HNE_1085
Alternate gene names: 114800341
Gene position: 1093723-1095294 (Clockwise)
Preceding gene: 114799619
Following gene: 114797660
Centisome position: 29.52
GC content: 60.62
Gene sequence:
>1572_bases ATGGCGGAAACAGGAGAGTTCAGCCGCGGCTGGCCAGTTGTCAGCGCCGCAGCCGTCGGGGTCGGACTCGGACTTTCTCC GCTGCCATTTTATACCATCGGTGTGATGATCCCGCCGATGCTGGCGGAATTTGGCCCGATGGGCTGGGCGCCGGGCGACA TTCTCAATGCGCTGGCAATCTACACCTTCGGTGTGTTCATTGCCGCGCCGGTCGTCGGCATTCTCGCGCAGAAATTCGGC GCGCGGATTATCGCGCTGATTTCGATCGTGACGTTCAGCCTGGCGATGATGGCGCTGGCCTTCAACACAGGCTCGAAGCC GCTCTATATTTTCCTCTGGCTGGTGCTGGCTTTTGCCGGGGCGGGTACACTGCCGATTACATTTACCCGGCCGGTTGCCG CCTGGTTTGAGAAGAACCGCGGCATTGTGCTGGGCATTGCGCTGATCGCTACGGGCGTCAGCGGCGCGCTGGCGAAATTC TTTGCGCAATACATCGTATCGAACCCGGAATGGCACTTCTTCAACGGATCGGGCTGGCGCAGCGCGTATATTCTTCTCGG CCTTCTGCCGCTGACGATTTCGCTGCCCTTGAGCCTGCTGAGCCTGCGGGACCTTGACGACAAGCCGGCCAGCCAGTCGC GCCTTGTGAAGCTGAAACTGCCAATCCTCGGCATCTCGCTGCTCGGCACTTTGGGGCTCGGGGCGCTGGTCTGGATGCAG GTTCTGCCGCTGATCGAGGCAAATGGGTTGCGGCTCGAATACATGATGGCGATTGTGTTCTCGCTGCTGATGCTATTGCC GGTGCTGGCGATGATCTTCCTGGACATCCGCAAGAACCCGCCCGAGCGCGTTGATGGGATTGCTATCGTGCTGAAGGGGA TGAGCCTGGGCGAGGCCCTGAAGGACTGGCGGTTCTGGCTGCTGGGCATCTGCTTCATGCCGATCTCCTACGCCGTGGGC GCGGTGATCCCCAATATCGAGCGGATTCTGGTGGCGCAGTCATTCGACATCAATGAAGCGGTAGGGCTGGCAACTCTGAC TGGGCTGGCAGTGCTTCTGGGCCGGGCGGTCGGGGGTTATCTGATTGACCGTTTCTGGGCGCCGGCCGTGGCGTTTGCCT TCCTTGCCTCGCCGGCCATTGCGTTGTGGCTGCTCGGTCAGCCGGGACTGAACCCGACGACGGCGACCATCGCTATCCTG ATGATCGGGTTTGGCGCCGGGGTTGAATACGACTTCATGGCGTACATCGTCTCGAAGTATTTCGGGATGAAGTCCTATAC CGCGATCTATGGCACGCTTTATGCCTTCTTTGCGGTTGGCGCAGGGCTTGGCCCGTCGATCATGTCGGATATTGCGGACG GGCGGGGTATCCACTTCCTGGGGGCCAATACAGGCCTTCTCCCCGGATATGATTGGGAATGGACGTTGACCAGTGCGGCG ATCATCCTGTTCATCTCTACACTGCCGATCCTGGCGCTCGGCAAATACCGGTATGACCGGGAGCATCAGGACAAGGCCAA GGCGCCGCCGGCGATTGCACCGGCGGGCGCGGTAAAGCCTTCAGAGGTGTGA
Upstream 100 bases:
>100_bases TTTCCTCTCGACGGAGCGCTCAAATGATATACCAATTACATGACGATAAGACTTGAAATCGTGCTTTCACAGGCACCCGG TAACGCGAGGAGTTCGTAGA
Downstream 100 bases:
>100_bases TTTCAGAAGGGCTGCAACTTCTTCGGGCCACACGTCCATGAAGTTGTAGCCCCATTCCGGGCATTCGATCACCTGACCGT TGCGCATGAGCGGTATCGCC
Product: major facilitator family transporter
Products: NA
Alternate protein names: Facilitator Family Transporter; Facilitator Superfamily Protein; Transporter Facilitator Family; Facilitator Superfamily Transporter; Facilitator Superfamily ; Facilitator Superfamilytransporter; Transporter Facilitator Superfamily
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MAETGEFSRGWPVVSAAAVGVGLGLSPLPFYTIGVMIPPMLAEFGPMGWAPGDILNALAIYTFGVFIAAPVVGILAQKFG ARIIALISIVTFSLAMMALAFNTGSKPLYIFLWLVLAFAGAGTLPITFTRPVAAWFEKNRGIVLGIALIATGVSGALAKF FAQYIVSNPEWHFFNGSGWRSAYILLGLLPLTISLPLSLLSLRDLDDKPASQSRLVKLKLPILGISLLGTLGLGALVWMQ VLPLIEANGLRLEYMMAIVFSLLMLLPVLAMIFLDIRKNPPERVDGIAIVLKGMSLGEALKDWRFWLLGICFMPISYAVG AVIPNIERILVAQSFDINEAVGLATLTGLAVLLGRAVGGYLIDRFWAPAVAFAFLASPAIALWLLGQPGLNPTTATIAIL MIGFGAGVEYDFMAYIVSKYFGMKSYTAIYGTLYAFFAVGAGLGPSIMSDIADGRGIHFLGANTGLLPGYDWEWTLTSAA IILFISTLPILALGKYRYDREHQDKAKAPPAIAPAGAVKPSEV
Sequences:
>Translated_523_residues MAETGEFSRGWPVVSAAAVGVGLGLSPLPFYTIGVMIPPMLAEFGPMGWAPGDILNALAIYTFGVFIAAPVVGILAQKFG ARIIALISIVTFSLAMMALAFNTGSKPLYIFLWLVLAFAGAGTLPITFTRPVAAWFEKNRGIVLGIALIATGVSGALAKF FAQYIVSNPEWHFFNGSGWRSAYILLGLLPLTISLPLSLLSLRDLDDKPASQSRLVKLKLPILGISLLGTLGLGALVWMQ VLPLIEANGLRLEYMMAIVFSLLMLLPVLAMIFLDIRKNPPERVDGIAIVLKGMSLGEALKDWRFWLLGICFMPISYAVG AVIPNIERILVAQSFDINEAVGLATLTGLAVLLGRAVGGYLIDRFWAPAVAFAFLASPAIALWLLGQPGLNPTTATIAIL MIGFGAGVEYDFMAYIVSKYFGMKSYTAIYGTLYAFFAVGAGLGPSIMSDIADGRGIHFLGANTGLLPGYDWEWTLTSAA IILFISTLPILALGKYRYDREHQDKAKAPPAIAPAGAVKPSEV >Mature_522_residues AETGEFSRGWPVVSAAAVGVGLGLSPLPFYTIGVMIPPMLAEFGPMGWAPGDILNALAIYTFGVFIAAPVVGILAQKFGA RIIALISIVTFSLAMMALAFNTGSKPLYIFLWLVLAFAGAGTLPITFTRPVAAWFEKNRGIVLGIALIATGVSGALAKFF AQYIVSNPEWHFFNGSGWRSAYILLGLLPLTISLPLSLLSLRDLDDKPASQSRLVKLKLPILGISLLGTLGLGALVWMQV LPLIEANGLRLEYMMAIVFSLLMLLPVLAMIFLDIRKNPPERVDGIAIVLKGMSLGEALKDWRFWLLGICFMPISYAVGA VIPNIERILVAQSFDINEAVGLATLTGLAVLLGRAVGGYLIDRFWAPAVAFAFLASPAIALWLLGQPGLNPTTATIAILM IGFGAGVEYDFMAYIVSKYFGMKSYTAIYGTLYAFFAVGAGLGPSIMSDIADGRGIHFLGANTGLLPGYDWEWTLTSAAI ILFISTLPILALGKYRYDREHQDKAKAPPAIAPAGAVKPSEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55942; Mature: 55811
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETGEFSRGWPVVSAAAVGVGLGLSPLPFYTIGVMIPPMLAEFGPMGWAPGDILNALAI CCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH YTFGVFIAAPVVGILAQKFGARIIALISIVTFSLAMMALAFNTGSKPLYIFLWLVLAFAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC AGTLPITFTRPVAAWFEKNRGIVLGIALIATGVSGALAKFFAQYIVSNPEWHFFNGSGWR CCCCCEEECHHHHHHHHCCCCEEEEHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCHH SAYILLGLLPLTISLPLSLLSLRDLDDKPASQSRLVKLKLPILGISLLGTLGLGALVWMQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH VLPLIEANGLRLEYMMAIVFSLLMLLPVLAMIFLDIRKNPPERVDGIAIVLKGMSLGEAL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHEEECCHHHHHH KDWRFWLLGICFMPISYAVGAVIPNIERILVAQSFDINEAVGLATLTGLAVLLGRAVGGY HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHH LIDRFWAPAVAFAFLASPAIALWLLGQPGLNPTTATIAILMIGFGAGVEYDFMAYIVSKY HHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH FGMKSYTAIYGTLYAFFAVGAGLGPSIMSDIADGRGIHFLGANTGLLPGYDWEWTLTSAA HCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHH IILFISTLPILALGKYRYDREHQDKAKAPPAIAPAGAVKPSEV HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure AETGEFSRGWPVVSAAAVGVGLGLSPLPFYTIGVMIPPMLAEFGPMGWAPGDILNALAI CCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH YTFGVFIAAPVVGILAQKFGARIIALISIVTFSLAMMALAFNTGSKPLYIFLWLVLAFAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC AGTLPITFTRPVAAWFEKNRGIVLGIALIATGVSGALAKFFAQYIVSNPEWHFFNGSGWR CCCCCEEECHHHHHHHHCCCCEEEEHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCHH SAYILLGLLPLTISLPLSLLSLRDLDDKPASQSRLVKLKLPILGISLLGTLGLGALVWMQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH VLPLIEANGLRLEYMMAIVFSLLMLLPVLAMIFLDIRKNPPERVDGIAIVLKGMSLGEAL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHEEECCHHHHHH KDWRFWLLGICFMPISYAVGAVIPNIERILVAQSFDINEAVGLATLTGLAVLLGRAVGGY HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHH LIDRFWAPAVAFAFLASPAIALWLLGQPGLNPTTATIAILMIGFGAGVEYDFMAYIVSKY HHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH FGMKSYTAIYGTLYAFFAVGAGLGPSIMSDIADGRGIHFLGANTGLLPGYDWEWTLTSAA HCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHH IILFISTLPILALGKYRYDREHQDKAKAPPAIAPAGAVKPSEV HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA