| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799597
Identifier: 114799597
GI number: 114799597
Start: 1620189
End: 1621151
Strand: Direct
Name: 114799597
Synonym: HNE_1588
Alternate gene names: NA
Gene position: 1620189-1621151 (Clockwise)
Preceding gene: 114798132
Following gene: 114800425
Centisome position: 43.73
GC content: 59.4
Gene sequence:
>963_bases ATGAGCCCGCGGATCGGCCTCATCGTCAGTCCGCTCAGTCATACAGTGCAGCGAAAGGGTTCCATCCTTGAGCGTGTGAG TACGCATGTCGAAAATGCGGAACTTATCCGCATCGAAGATTTCAATGATTTGCCCGATCAGCTCGCCCGTCTTGCCCGCA CGGACGTTTCTGCCGTTCTGGTTGAAGGGGGGGATGGAACGCTCCAAGCTGTGATGTCGGCCTGGCCCGGCCTTGCAGAC GGCGGAACGTCTTTGCCAGACTTCGCTATACTCCCCGGTGGCAGCACGAATTTGGCCTACAAGATCGCCGGTTTGAAATG CCGCGGAGCCGATGACATCGTCAGATACATTGCGCAATTCCGGGCTGGTCGGCCGGTAACCCGAACGAGCTTGCCTGCGT TGCGCGTTGAGGCTGCCGGTCTGGCCCGGCCCCAGATCGGAATGTTGCTTTCCACAGGGTCGCTCGCGCGCGCGATGATC TACACGCAGCAACAGATACATGGAGAAACCCATCGCGGGTCACTCGCCGTCGCGGAAGCTGCCGCTCGCTTCGTCTTCGC TCCCGAAGCCTATCTTGATACGGATGGCGCGCCGCTCCTTCGCTCAAGCGAACTCAGTGTCTCGGCTCCCTCATTTCAAT TGCGCGGCGCGCACGCGCTGAGCCTGATGACAACTCTGCCCTCCCTAAGTCTCGGGCTTACTCCGTTCTGGGGGCTGGGC GCAGGGGCGATCGCTTTTACCCGCGCCGCATGGCCCATTTTACATTTTCGGCTGGCATTCCTGAAAATTCTCGCCGGTCA TGCTGGTCCGGCGATGGCGCGGCACGGACTGACCAGCCACAGAACCGATACACTGGAACTGGCCTGTTCTGGCGCAATTG TTCTCGATGGGGAGTTGTTGCAACTGCCAGAAAATATCCCCATCACGATCAGTGCAACCAGCCCGCTCCGGTTTTTGAGA TGA
Upstream 100 bases:
>100_bases CTGAGAACGGAAGCATCAGCCCTATTCTGGCGGTCGCTCTGCCGATCCTGGCGCTATTCCTGGGAAGTATGTGGCTCGCG CTAGAACGGGAAATCAGAAA
Downstream 100 bases:
>100_bases CACTTGATCCCCGCCTGCCAGCGCTTCGCGCGCTCATCCTGAAAGATCAGATTGAACTGGTGCAGGGCGCCCAGGAAATG GCTCGCGCTATCCATGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSPRIGLIVSPLSHTVQRKGSILERVSTHVENAELIRIEDFNDLPDQLARLARTDVSAVLVEGGDGTLQAVMSAWPGLAD GGTSLPDFAILPGGSTNLAYKIAGLKCRGADDIVRYIAQFRAGRPVTRTSLPALRVEAAGLARPQIGMLLSTGSLARAMI YTQQQIHGETHRGSLAVAEAAARFVFAPEAYLDTDGAPLLRSSELSVSAPSFQLRGAHALSLMTTLPSLSLGLTPFWGLG AGAIAFTRAAWPILHFRLAFLKILAGHAGPAMARHGLTSHRTDTLELACSGAIVLDGELLQLPENIPITISATSPLRFLR
Sequences:
>Translated_320_residues MSPRIGLIVSPLSHTVQRKGSILERVSTHVENAELIRIEDFNDLPDQLARLARTDVSAVLVEGGDGTLQAVMSAWPGLAD GGTSLPDFAILPGGSTNLAYKIAGLKCRGADDIVRYIAQFRAGRPVTRTSLPALRVEAAGLARPQIGMLLSTGSLARAMI YTQQQIHGETHRGSLAVAEAAARFVFAPEAYLDTDGAPLLRSSELSVSAPSFQLRGAHALSLMTTLPSLSLGLTPFWGLG AGAIAFTRAAWPILHFRLAFLKILAGHAGPAMARHGLTSHRTDTLELACSGAIVLDGELLQLPENIPITISATSPLRFLR >Mature_319_residues SPRIGLIVSPLSHTVQRKGSILERVSTHVENAELIRIEDFNDLPDQLARLARTDVSAVLVEGGDGTLQAVMSAWPGLADG GTSLPDFAILPGGSTNLAYKIAGLKCRGADDIVRYIAQFRAGRPVTRTSLPALRVEAAGLARPQIGMLLSTGSLARAMIY TQQQIHGETHRGSLAVAEAAARFVFAPEAYLDTDGAPLLRSSELSVSAPSFQLRGAHALSLMTTLPSLSLGLTPFWGLGA GAIAFTRAAWPILHFRLAFLKILAGHAGPAMARHGLTSHRTDTLELACSGAIVLDGELLQLPENIPITISATSPLRFLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33949; Mature: 33817
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPRIGLIVSPLSHTVQRKGSILERVSTHVENAELIRIEDFNDLPDQLARLARTDVSAVL CCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCEEEE VEGGDGTLQAVMSAWPGLADGGTSLPDFAILPGGSTNLAYKIAGLKCRGADDIVRYIAQF EECCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEEEEEECEEECCHHHHHHHHHHH RAGRPVTRTSLPALRVEAAGLARPQIGMLLSTGSLARAMIYTQQQIHGETHRGSLAVAEA HCCCCCCCCCCCHHEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHH AARFVFAPEAYLDTDGAPLLRSSELSVSAPSFQLRGAHALSLMTTLPSLSLGLTPFWGLG HHHEEECCHHHCCCCCCCCEECCCCEEECCCEEECCHHHHHHHHHCCCCCCCCCCCCCCC AGAIAFTRAAWPILHFRLAFLKILAGHAGPAMARHGLTSHRTDTLELACSGAIVLDGELL CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEECCEEEECCHHE QLPENIPITISATSPLRFLR ECCCCCCEEEECCCCHHHCC >Mature Secondary Structure SPRIGLIVSPLSHTVQRKGSILERVSTHVENAELIRIEDFNDLPDQLARLARTDVSAVL CCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCEEEE VEGGDGTLQAVMSAWPGLADGGTSLPDFAILPGGSTNLAYKIAGLKCRGADDIVRYIAQF EECCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEEEEEECEEECCHHHHHHHHHHH RAGRPVTRTSLPALRVEAAGLARPQIGMLLSTGSLARAMIYTQQQIHGETHRGSLAVAEA HCCCCCCCCCCCHHEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHH AARFVFAPEAYLDTDGAPLLRSSELSVSAPSFQLRGAHALSLMTTLPSLSLGLTPFWGLG HHHEEECCHHHCCCCCCCCEECCCCEEECCCEEECCHHHHHHHHHCCCCCCCCCCCCCCC AGAIAFTRAAWPILHFRLAFLKILAGHAGPAMARHGLTSHRTDTLELACSGAIVLDGELL CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEECCEEEECCHHE QLPENIPITISATSPLRFLR ECCCCCCEEEECCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA