| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799581
Identifier: 114799581
GI number: 114799581
Start: 2623409
End: 2624287
Strand: Reverse
Name: 114799581
Synonym: HNE_2494
Alternate gene names: NA
Gene position: 2624287-2623409 (Counterclockwise)
Preceding gene: 114798542
Following gene: 114800394
Centisome position: 70.83
GC content: 58.82
Gene sequence:
>879_bases ATGTCGATCTTGGGAATATCATTCTCCCCTAAAAACCTCGCCGGGCTCGCTTTCCTTGGCGCGCTGCTTGTCCAGGGCGC CGACGCCGGATGTGAAGCAGAAATTCGCCGGGTTGAGGCGCCGGGCGTTTTGCTTGACCCGTTCGATGCCCGTCAGCGGC CCGCTCAGATCAGCCTGGTGATTGCTAACCATGGAGATGAGGACTGTGTTGCCTCCGTAGTGATCCGGGACCAGCTCCAC CAGCAAGGCGCCCGCGCGTCCCGGCAGGGAGTTGAGCTGGAATTCATCGAACGGCGCCGCTCCGCAGTGTCGGTTCCCGG AGCGCTCGCCATTAAGGACGTCCGGGTGCCGGCCGGAAAGGAACAGGAAATTCAGTTTACACCACAATTGAGCTTTACCA ATGTGCCCCTTCGGGGCGCGCGTCAGTTCGAACTGACTGCAGATATCTACGATGGAAGCCTTCAAAGTCAGGCTGGTTCG ACGCCCTTTGACCTGAACGTTGAGGTTCTGGCCTCAACGGCAATTTCGCTTGCGGGAATGAACGCCGACAGGACCGTTTA TCTGGGCGACCTTCGTCCCGGGGCGCGCGGCAACGCCAGCTTTTATGTTCAATCCAATGGTCCGTACAAGATGACTATCC GGTCAGAGAATCGCGGGGTTCTGACGCATACGGAAGACCGCCGGCTGGCGGGTATACGCTATGAAGTCCAGGCCGATGAT CAGATCGCTTCGCTGACGCAGGCCATGACCGTTTACCGGAATGACCGCACGCCGCTGCTCGGGGACAGAATGATCCTTGG TATCCGTACGGCGCCCAGCCCTCTGTCTTTTGCAGGCACGTACAAGGATATCATCGAGGTCGAGGTGACACCTTACTGA
Upstream 100 bases:
>100_bases CGGTTCGTGTTAGAGCGGATCGCGCCGGGTGATTATGAATTACGGCTCGATGGCGATGACTTTGCCGTCAATCTGAAAAT AACCGAAAGCGAAGAATCTT
Downstream 100 bases:
>100_bases ATTCCAGCGAGGCTGGCTGGTCTTATTAACGGATTTTTTTTGCATGCCGCTTACCGTCCAGCGCTTCGGCACCGGAGGCG GCTATGCGTGCATTATTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MSILGISFSPKNLAGLAFLGALLVQGADAGCEAEIRRVEAPGVLLDPFDARQRPAQISLVIANHGDEDCVASVVIRDQLH QQGARASRQGVELEFIERRRSAVSVPGALAIKDVRVPAGKEQEIQFTPQLSFTNVPLRGARQFELTADIYDGSLQSQAGS TPFDLNVEVLASTAISLAGMNADRTVYLGDLRPGARGNASFYVQSNGPYKMTIRSENRGVLTHTEDRRLAGIRYEVQADD QIASLTQAMTVYRNDRTPLLGDRMILGIRTAPSPLSFAGTYKDIIEVEVTPY
Sequences:
>Translated_292_residues MSILGISFSPKNLAGLAFLGALLVQGADAGCEAEIRRVEAPGVLLDPFDARQRPAQISLVIANHGDEDCVASVVIRDQLH QQGARASRQGVELEFIERRRSAVSVPGALAIKDVRVPAGKEQEIQFTPQLSFTNVPLRGARQFELTADIYDGSLQSQAGS TPFDLNVEVLASTAISLAGMNADRTVYLGDLRPGARGNASFYVQSNGPYKMTIRSENRGVLTHTEDRRLAGIRYEVQADD QIASLTQAMTVYRNDRTPLLGDRMILGIRTAPSPLSFAGTYKDIIEVEVTPY >Mature_291_residues SILGISFSPKNLAGLAFLGALLVQGADAGCEAEIRRVEAPGVLLDPFDARQRPAQISLVIANHGDEDCVASVVIRDQLHQ QGARASRQGVELEFIERRRSAVSVPGALAIKDVRVPAGKEQEIQFTPQLSFTNVPLRGARQFELTADIYDGSLQSQAGST PFDLNVEVLASTAISLAGMNADRTVYLGDLRPGARGNASFYVQSNGPYKMTIRSENRGVLTHTEDRRLAGIRYEVQADDQ IASLTQAMTVYRNDRTPLLGDRMILGIRTAPSPLSFAGTYKDIIEVEVTPY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31702; Mature: 31571
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILGISFSPKNLAGLAFLGALLVQGADAGCEAEIRRVEAPGVLLDPFDARQRPAQISLV CEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEECCCCCCCCCCEEEEE IANHGDEDCVASVVIRDQLHQQGARASRQGVELEFIERRRSAVSVPGALAIKDVRVPAGK EECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCC EQEIQFTPQLSFTNVPLRGARQFELTADIYDGSLQSQAGSTPFDLNVEVLASTAISLAGM CCCEEECCCCEEECCCCCCCEEEEEEEEEECCCCHHCCCCCCCCCCHHHEEHHHHHEECC NADRTVYLGDLRPGARGNASFYVQSNGPYKMTIRSENRGVLTHTEDRRLAGIRYEVQADD CCCCEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEEEEECCH QIASLTQAMTVYRNDRTPLLGDRMILGIRTAPSPLSFAGTYKDIIEVEVTPY HHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure SILGISFSPKNLAGLAFLGALLVQGADAGCEAEIRRVEAPGVLLDPFDARQRPAQISLV EEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEECCCCCCCCCCEEEEE IANHGDEDCVASVVIRDQLHQQGARASRQGVELEFIERRRSAVSVPGALAIKDVRVPAGK EECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCC EQEIQFTPQLSFTNVPLRGARQFELTADIYDGSLQSQAGSTPFDLNVEVLASTAISLAGM CCCEEECCCCEEECCCCCCCEEEEEEEEEECCCCHHCCCCCCCCCCHHHEEHHHHHEECC NADRTVYLGDLRPGARGNASFYVQSNGPYKMTIRSENRGVLTHTEDRRLAGIRYEVQADD CCCCEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEEEEECCH QIASLTQAMTVYRNDRTPLLGDRMILGIRTAPSPLSFAGTYKDIIEVEVTPY HHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA