Click here to switch to the map view.

The map label for this gene is 114798542

Identifier: 114798542

GI number: 114798542

Start: 2624256

End: 2626670

Strand: Reverse

Name: 114798542

Synonym: HNE_2495

Alternate gene names: NA

Gene position: 2626670-2624256 (Counterclockwise)

Preceding gene: 114800023

Following gene: 114799581

Centisome position: 70.89

GC content: 59.05

Gene sequence:

>2415_bases
GTGAATTGGCAGCGCGCTCTTCTTCTGACGTCAGCGACCTGGTTTGGCGGGGGCAAGGCCCTCGCTGAGCCTTTTCCTGA
AGCGCCTCAGTCGCTGGAACTGACCTTTCCAGTCTCGGTCAATGGGCAGCTTGCGGGCAATGTCCTGGCTGATGTTGGGC
TGCGAACCGATCCGAATGTTGATGCGGAACAGCTATTAGGCCTCCTCTCAAAGACCTTCGACCAGAATGTCCTTAGCCGG
ATTGCTTCAAATTTGCCTGACGAGCGCCGCGTCGGCTTGGACAGGCTGCGCACCGCCGGGCTTGATATACGATACAATTC
CCAGGCGCTCCGTCTGGAAATAACTGCCACAGAGCAGGAAACCCGGCAGCAGATCCTCTCGCTGACCGGTGTGCAGCGGC
CCGATCCGGCCAATTACCTGGCGCCCTCCCGCGCCGCGGCCGGCATCACCGCTTCGCTGCTCGCCGAATACCGCCATGAG
ACCGATGTCGGGGATGCCGGCTTCCAGCCGGTCGAGGCGGCGGCCCAGGGTTTTGTGAATGTGGGAGGTTTTGAAGGTTT
CACGCTCGATTTCGATGTGCGGGTCACCGAAGACGCCGAGCTGATCCGGAACGGCGTTGTTCTCTCCAAGGATGATTATG
AGCGGGGCATCCGTTACTCGGCGGGCGATATCGATCCGCCGGTTACCGGCTTCCAGTCAACACCTACCTTGGGCGGTCTA
TCTGTCAGCCGGCAATTTGGTACAATTCAGCCCTTCCGCGACATTCGCCCTAGCGGCCAGCAGGGGCTTTACCTCCAACG
GGCCGCTACAGTCGATGTGGTCGTCAATGGAGTCATTATCCGCACACTGAACCTGGCTGCCGGGCGCTATGAGCTCAGGG
ACTTTCCCTTCATTGATGCGGCCGCAGATGTTGAGTTCTATGTTGACGACGGAGCGGGACGCCAGCAGGTGGCCTCGCTC
TCCCTGTTTGGCAGTGACGGACTGATCGAGCCGGGTGTAAGTGTCTTTTCCGGGACGCTTGGCCTGCAGTCGGAAACACG
GACACCTAATGAGAACTATGATGGCGACCTCGCTTTTACAGGATACTATGAACGCGGCCTGACGCGGGGCCTGACACTGG
GCGCGAATATTCAGGCGAGCGCGCGCGAATCCACGATCGGTTTGCGGGCCGCAACAGCGTCGGGCTTGGGGCGAATTTCG
GTGGACATGGCCGGCAGCACGCGAGAGGGCGGGCAGGGTCAGGAAACCGGTTATGCCTTCGCGGCCACTTATCGCAACTT
CTTCAATGTGACAGAAGAGCTGGGCGCGAGCCTTGAGCTGGCAGCCTCCTCCTATTCGCCGCATTTTTCGACCCTCGGGG
ACGGTCTGGATATTCAGCCTCGAGAGTGGGACGCTGCCGCCAGAGCGTCAGTCCAGCTGCCGGCAGCCGCCAGTGTTACG
GTAGGCGCCCGTCTCTCTCGTGGACGCGGAACTGTTCCGGATGAAGAACAATATGACGTATCTGTCAGCAAGCTGTTCGG
GCGTGTGAACACCTTTGTCAGTGTCGGTTATGATGCCGTCACCCAGAATGCGACAGGCCGGATCGGGGTCAGTCTCAGAT
GGGGGCAGCGCTCTGCGGTAAGATCGTCCTATAACAGCCGGAATGATCTCTTCGTGGTGGAAGCCGAGCGGATGCCGCGT
CTGCAGGTGAAGGATCTGAGCGGACGATTTGGGTATGAACGCCGGCCAGAGGCGGATGTCATATATGGCGATGGTCTTTA
TCGGGGTAATCGCGTCGAGATTGCCGCGAGGCACATTATGGCGGCGCCGGATGTCAGCCGCAGTCCGTCGGAGCAGATCA
CGACTGCCCGGGTGTCGACCGGTATCGGGATAACGCCAGAAGGATGGGCCCTGGGCCGGCGCACCGATGAAGGGTTTGCG
ATTGTGCGCCCTCACAAGTCGCTGCGAGGCCAGGATATTGATCTGGGCGCGGGTTATGCGCGGGGCGCCGTTGCAAAAGT
GGACGGCCTGGGCGCGGTGGCGGTGCCACTCATACAGCCTTATGTCCCACAATCTGTCCGGGTCGATGTGCGAAATCTTC
CGGCAGGCTATGACATTGGATCTGCTAGATATGATGTGATGCCGGGTTCGGGTTCGGGCTATAACATCGTGATCGGCTCT
GACGCTTCCTACACGATCGTTGGCACTCTGGTGTCAGAGACGCGAGATCTTTACCTCTCTACCGGCACCCTCACATCTCA
GGAATCCGGAGAAGCCTACGCGTTCTTTACAAATAGAACCGGCCGGTTCGTGTTAGAGCGGATCGCGCCGGGTGATTATG
AATTACGGCTCGATGGCGATGACTTTGCCGTCAATCTGAAAATAACCGAAAGCGAAGAATCTTATGTCGATCTTGGGAAT
ATCATTCTCCCCTAA

Upstream 100 bases:

>100_bases
GGGTGGATATTCCGGAAACATTAAGCGGTCAGCCGATTGTCAGCGCGGAAATATCTGCTCTGCCTGCTGAGTAGGTGCGG
CAGAGAGACCGGTACTTTCC

Downstream 100 bases:

>100_bases
AAACCTCGCCGGGCTCGCTTTCCTTGGCGCGCTGCTTGTCCAGGGCGCCGACGCCGGATGTGAAGCAGAAATTCGCCGGG
TTGAGGCGCCGGGCGTTTTG

Product: fimbrial usher protein

Products: NA

Alternate protein names: Fimbrial Usher Protein; P Pilus Assembly Protein Porin PapC; Type I Pili; Outer Membrane Usher Protein FimD

Number of amino acids: Translated: 804; Mature: 804

Protein sequence:

>804_residues
MNWQRALLLTSATWFGGGKALAEPFPEAPQSLELTFPVSVNGQLAGNVLADVGLRTDPNVDAEQLLGLLSKTFDQNVLSR
IASNLPDERRVGLDRLRTAGLDIRYNSQALRLEITATEQETRQQILSLTGVQRPDPANYLAPSRAAAGITASLLAEYRHE
TDVGDAGFQPVEAAAQGFVNVGGFEGFTLDFDVRVTEDAELIRNGVVLSKDDYERGIRYSAGDIDPPVTGFQSTPTLGGL
SVSRQFGTIQPFRDIRPSGQQGLYLQRAATVDVVVNGVIIRTLNLAAGRYELRDFPFIDAAADVEFYVDDGAGRQQVASL
SLFGSDGLIEPGVSVFSGTLGLQSETRTPNENYDGDLAFTGYYERGLTRGLTLGANIQASARESTIGLRAATASGLGRIS
VDMAGSTREGGQGQETGYAFAATYRNFFNVTEELGASLELAASSYSPHFSTLGDGLDIQPREWDAAARASVQLPAAASVT
VGARLSRGRGTVPDEEQYDVSVSKLFGRVNTFVSVGYDAVTQNATGRIGVSLRWGQRSAVRSSYNSRNDLFVVEAERMPR
LQVKDLSGRFGYERRPEADVIYGDGLYRGNRVEIAARHIMAAPDVSRSPSEQITTARVSTGIGITPEGWALGRRTDEGFA
IVRPHKSLRGQDIDLGAGYARGAVAKVDGLGAVAVPLIQPYVPQSVRVDVRNLPAGYDIGSARYDVMPGSGSGYNIVIGS
DASYTIVGTLVSETRDLYLSTGTLTSQESGEAYAFFTNRTGRFVLERIAPGDYELRLDGDDFAVNLKITESEESYVDLGN
IILP

Sequences:

>Translated_804_residues
MNWQRALLLTSATWFGGGKALAEPFPEAPQSLELTFPVSVNGQLAGNVLADVGLRTDPNVDAEQLLGLLSKTFDQNVLSR
IASNLPDERRVGLDRLRTAGLDIRYNSQALRLEITATEQETRQQILSLTGVQRPDPANYLAPSRAAAGITASLLAEYRHE
TDVGDAGFQPVEAAAQGFVNVGGFEGFTLDFDVRVTEDAELIRNGVVLSKDDYERGIRYSAGDIDPPVTGFQSTPTLGGL
SVSRQFGTIQPFRDIRPSGQQGLYLQRAATVDVVVNGVIIRTLNLAAGRYELRDFPFIDAAADVEFYVDDGAGRQQVASL
SLFGSDGLIEPGVSVFSGTLGLQSETRTPNENYDGDLAFTGYYERGLTRGLTLGANIQASARESTIGLRAATASGLGRIS
VDMAGSTREGGQGQETGYAFAATYRNFFNVTEELGASLELAASSYSPHFSTLGDGLDIQPREWDAAARASVQLPAAASVT
VGARLSRGRGTVPDEEQYDVSVSKLFGRVNTFVSVGYDAVTQNATGRIGVSLRWGQRSAVRSSYNSRNDLFVVEAERMPR
LQVKDLSGRFGYERRPEADVIYGDGLYRGNRVEIAARHIMAAPDVSRSPSEQITTARVSTGIGITPEGWALGRRTDEGFA
IVRPHKSLRGQDIDLGAGYARGAVAKVDGLGAVAVPLIQPYVPQSVRVDVRNLPAGYDIGSARYDVMPGSGSGYNIVIGS
DASYTIVGTLVSETRDLYLSTGTLTSQESGEAYAFFTNRTGRFVLERIAPGDYELRLDGDDFAVNLKITESEESYVDLGN
IILP
>Mature_804_residues
MNWQRALLLTSATWFGGGKALAEPFPEAPQSLELTFPVSVNGQLAGNVLADVGLRTDPNVDAEQLLGLLSKTFDQNVLSR
IASNLPDERRVGLDRLRTAGLDIRYNSQALRLEITATEQETRQQILSLTGVQRPDPANYLAPSRAAAGITASLLAEYRHE
TDVGDAGFQPVEAAAQGFVNVGGFEGFTLDFDVRVTEDAELIRNGVVLSKDDYERGIRYSAGDIDPPVTGFQSTPTLGGL
SVSRQFGTIQPFRDIRPSGQQGLYLQRAATVDVVVNGVIIRTLNLAAGRYELRDFPFIDAAADVEFYVDDGAGRQQVASL
SLFGSDGLIEPGVSVFSGTLGLQSETRTPNENYDGDLAFTGYYERGLTRGLTLGANIQASARESTIGLRAATASGLGRIS
VDMAGSTREGGQGQETGYAFAATYRNFFNVTEELGASLELAASSYSPHFSTLGDGLDIQPREWDAAARASVQLPAAASVT
VGARLSRGRGTVPDEEQYDVSVSKLFGRVNTFVSVGYDAVTQNATGRIGVSLRWGQRSAVRSSYNSRNDLFVVEAERMPR
LQVKDLSGRFGYERRPEADVIYGDGLYRGNRVEIAARHIMAAPDVSRSPSEQITTARVSTGIGITPEGWALGRRTDEGFA
IVRPHKSLRGQDIDLGAGYARGAVAKVDGLGAVAVPLIQPYVPQSVRVDVRNLPAGYDIGSARYDVMPGSGSGYNIVIGS
DASYTIVGTLVSETRDLYLSTGTLTSQESGEAYAFFTNRTGRFVLERIAPGDYELRLDGDDFAVNLKITESEESYVDLGN
IILP

Specific function: Unknown

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86457; Mature: 86457

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWQRALLLTSATWFGGGKALAEPFPEAPQSLELTFPVSVNGQLAGNVLADVGLRTDPNV
CCCCEEEEEEEEEECCCCCHHHCCCCCCCCCEEEEEEEEECCCCCCCHHHHCCCCCCCCC
DAEQLLGLLSKTFDQNVLSRIASNLPDERRVGLDRLRTAGLDIRYNSQALRLEITATEQE
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHCCCEEEECCCEEEEEEEECHHH
TRQQILSLTGVQRPDPANYLAPSRAAAGITASLLAEYRHETDVGDAGFQPVEAAAQGFVN
HHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEE
VGGFEGFTLDFDVRVTEDAELIRNGVVLSKDDYERGIRYSAGDIDPPVTGFQSTPTLGGL
CCCCCCEEEEEEEEECCCHHHHHCCEEECCCCHHCCCEECCCCCCCCCCCCCCCCCCCCE
SVSRQFGTIQPFRDIRPSGQQGLYLQRAATVDVVVNGVIIRTLNLAAGRYELRDFPFIDA
EECCCCCCCCCHHHCCCCCCCCEEEEECCEEEHEECCEEEEEEECCCCCEECCCCCEEEC
AADVEFYVDDGAGRQQVASLSLFGSDGLIEPGVSVFSGTLGLQSETRTPNENYDGDLAFT
CCCEEEEEECCCCHHHEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEE
GYYERGLTRGLTLGANIQASARESTIGLRAATASGLGRISVDMAGSTREGGQGQETGYAF
CCHHHCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEE
AATYRNFFNVTEELGASLELAASSYSPHFSTLGDGLDIQPREWDAAARASVQLPAAASVT
HHHHHHHHHHHHHHCCCEEEEECCCCCCHHHCCCCCCCCCCCCCHHHHCEEECCCCCEEE
VGARLSRGRGTVPDEEQYDVSVSKLFGRVNTFVSVGYDAVTQNATGRIGVSLRWGQRSAV
ECCEECCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEEECCCHHHH
RSSYNSRNDLFVVEAERMPRLQVKDLSGRFGYERRPEADVIYGDGLYRGNRVEIAARHIM
HHHCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEEEHHEE
AAPDVSRSPSEQITTARVSTGIGITPEGWALGRRTDEGFAIVRPHKSLRGQDIDLGAGYA
ECCCCCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCHHCCCCCCCCCCCCC
RGAVAKVDGLGAVAVPLIQPYVPQSVRVDVRNLPAGYDIGSARYDVMPGSGSGYNIVIGS
CCCEEEECCCCEEHHHHHCCCCCCCEEEEHHCCCCCCCCCCCEEEEECCCCCCEEEEEEC
DASYTIVGTLVSETRDLYLSTGTLTSQESGEAYAFFTNRTGRFVLERIAPGDYELRLDGD
CCCEEEEEEEHHCCCEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHCCCCCEEEEECCC
DFAVNLKITESEESYVDLGNIILP
CEEEEEEEECCCCCCEECCCEECC
>Mature Secondary Structure
MNWQRALLLTSATWFGGGKALAEPFPEAPQSLELTFPVSVNGQLAGNVLADVGLRTDPNV
CCCCEEEEEEEEEECCCCCHHHCCCCCCCCCEEEEEEEEECCCCCCCHHHHCCCCCCCCC
DAEQLLGLLSKTFDQNVLSRIASNLPDERRVGLDRLRTAGLDIRYNSQALRLEITATEQE
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHCCCEEEECCCEEEEEEEECHHH
TRQQILSLTGVQRPDPANYLAPSRAAAGITASLLAEYRHETDVGDAGFQPVEAAAQGFVN
HHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEE
VGGFEGFTLDFDVRVTEDAELIRNGVVLSKDDYERGIRYSAGDIDPPVTGFQSTPTLGGL
CCCCCCEEEEEEEEECCCHHHHHCCEEECCCCHHCCCEECCCCCCCCCCCCCCCCCCCCE
SVSRQFGTIQPFRDIRPSGQQGLYLQRAATVDVVVNGVIIRTLNLAAGRYELRDFPFIDA
EECCCCCCCCCHHHCCCCCCCCEEEEECCEEEHEECCEEEEEEECCCCCEECCCCCEEEC
AADVEFYVDDGAGRQQVASLSLFGSDGLIEPGVSVFSGTLGLQSETRTPNENYDGDLAFT
CCCEEEEEECCCCHHHEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEE
GYYERGLTRGLTLGANIQASARESTIGLRAATASGLGRISVDMAGSTREGGQGQETGYAF
CCHHHCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEE
AATYRNFFNVTEELGASLELAASSYSPHFSTLGDGLDIQPREWDAAARASVQLPAAASVT
HHHHHHHHHHHHHHCCCEEEEECCCCCCHHHCCCCCCCCCCCCCHHHHCEEECCCCCEEE
VGARLSRGRGTVPDEEQYDVSVSKLFGRVNTFVSVGYDAVTQNATGRIGVSLRWGQRSAV
ECCEECCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEEECCCHHHH
RSSYNSRNDLFVVEAERMPRLQVKDLSGRFGYERRPEADVIYGDGLYRGNRVEIAARHIM
HHHCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEEEHHEE
AAPDVSRSPSEQITTARVSTGIGITPEGWALGRRTDEGFAIVRPHKSLRGQDIDLGAGYA
ECCCCCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCHHCCCCCCCCCCCCC
RGAVAKVDGLGAVAVPLIQPYVPQSVRVDVRNLPAGYDIGSARYDVMPGSGSGYNIVIGS
CCCEEEECCCCEEHHHHHCCCCCCCEEEEHHCCCCCCCCCCCEEEEECCCCCCEEEEEEC
DASYTIVGTLVSETRDLYLSTGTLTSQESGEAYAFFTNRTGRFVLERIAPGDYELRLDGD
CCCEEEEEEEHHCCCEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHCCCCCEEEEECCC
DFAVNLKITESEESYVDLGNIILP
CEEEEEEEECCCCCCEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA