| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is iorA [H]
Identifier: 114799494
GI number: 114799494
Start: 2612062
End: 2612517
Strand: Reverse
Name: iorA [H]
Synonym: HNE_2483
Alternate gene names: 114799494
Gene position: 2612517-2612062 (Counterclockwise)
Preceding gene: 114800492
Following gene: 114798763
Centisome position: 70.51
GC content: 59.43
Gene sequence:
>456_bases ATGGCCAATCTGAAAGTCAATGGGAAACCGGTGTCCGTCGAGGCGGATGAGAGTACGCCGCTTTTGTGGGTTCTGAGGGA ACAGCTTGGCCTGACGGGGACGAAATACGGATGCGGGATTGCAGCCTGCGGCGCCTGTACCATCCATATTGATGGGGCCG CCGTGCGCGCCTGCGTTTATCCGCTGGGCGCCCTTTCCGGGGAAGAAGAGATCACGACCATCGAGGGCCTTTCGGCGGAT GGCAGCCATCCCGTTCAACAGGCCTGGGTGGAACTGGACGTGCCCCAGTGCGGTTATTGCCAGCCCGGCATGATCATGGC CGTGGCCGGCATGCTCAACAGCAACCCCAATCCTACCGACGAAGACATTGATCTTGAGATCACCAATATCTGCCGGTGCG GAACATTCACGCGTGTGCGCAAGGGCGTGCATCTTGCCAAGACCAAGAAAGCCTGA
Upstream 100 bases:
>100_bases CTGGTCGGGAATCCTGTTCTCCGAATGGTAGATGAGAGCCCAGCACACGTGATACGCACCTGCAGACGCACCCTGCAGCG AATGGAAATGGAGACGCGAC
Downstream 100 bases:
>100_bases GGACGGGAGACGGATATGACTGGAATTACGGATCTTTCCCGCCGCGCCTTTATCATTGCCACCGGAGCGACCGGCTTGGC GATTGGTGTTCTTGCCGCCT
Product: putative isoquinoline 1-oxidoreductase subunit alpha
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MANLKVNGKPVSVEADESTPLLWVLREQLGLTGTKYGCGIAACGACTIHIDGAAVRACVYPLGALSGEEEITTIEGLSAD GSHPVQQAWVELDVPQCGYCQPGMIMAVAGMLNSNPNPTDEDIDLEITNICRCGTFTRVRKGVHLAKTKKA
Sequences:
>Translated_151_residues MANLKVNGKPVSVEADESTPLLWVLREQLGLTGTKYGCGIAACGACTIHIDGAAVRACVYPLGALSGEEEITTIEGLSAD GSHPVQQAWVELDVPQCGYCQPGMIMAVAGMLNSNPNPTDEDIDLEITNICRCGTFTRVRKGVHLAKTKKA >Mature_150_residues ANLKVNGKPVSVEADESTPLLWVLREQLGLTGTKYGCGIAACGACTIHIDGAAVRACVYPLGALSGEEEITTIEGLSADG SHPVQQAWVELDVPQCGYCQPGMIMAVAGMLNSNPNPTDEDIDLEITNICRCGTFTRVRKGVHLAKTKKA
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=153, Percent_Identity=37.2549019607843, Blast_Score=75, Evalue=3e-14, Organism=Homo sapiens, GI71773480, Length=144, Percent_Identity=37.5, Blast_Score=64, Evalue=7e-11, Organism=Escherichia coli, GI1786480, Length=153, Percent_Identity=41.1764705882353, Blast_Score=102, Evalue=1e-23, Organism=Escherichia coli, GI1789232, Length=139, Percent_Identity=41.0071942446043, Blast_Score=92, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17540638, Length=143, Percent_Identity=39.8601398601399, Blast_Score=99, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17539860, Length=154, Percent_Identity=35.0649350649351, Blast_Score=93, Evalue=5e-20, Organism=Caenorhabditis elegans, GI32566215, Length=154, Percent_Identity=34.4155844155844, Blast_Score=91, Evalue=3e-19, Organism=Drosophila melanogaster, GI17737937, Length=151, Percent_Identity=35.7615894039735, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI24647197, Length=147, Percent_Identity=34.0136054421769, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24647195, Length=147, Percent_Identity=34.0136054421769, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24647201, Length=141, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24647193, Length=124, Percent_Identity=37.0967741935484, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24647199, Length=141, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 15958; Mature: 15827
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLKVNGKPVSVEADESTPLLWVLREQLGLTGTKYGCGIAACGACTIHIDGAAVRACVY CCCEECCCEEEEEECCCCCCCCEEEHHHHCCCCCCCCCCEEECCEEEEEECCHHHHHHHH PLGALSGEEEITTIEGLSADGSHPVQQAWVELDVPQCGYCQPGMIMAVAGMLNSNPNPTD HHHCCCCCCCEEEEECCCCCCCCCHHHHEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCC EDIDLEITNICRCGTFTRVRKGVHLAKTKKA CCCCEEEEEEECCCCHHHHHCCEECCCCCCC >Mature Secondary Structure ANLKVNGKPVSVEADESTPLLWVLREQLGLTGTKYGCGIAACGACTIHIDGAAVRACVY CCEECCCEEEEEECCCCCCCCEEEHHHHCCCCCCCCCCEEECCEEEEEECCHHHHHHHH PLGALSGEEEITTIEGLSADGSHPVQQAWVELDVPQCGYCQPGMIMAVAGMLNSNPNPTD HHHCCCCCCCEEEEECCCCCCCCCHHHHEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCC EDIDLEITNICRCGTFTRVRKGVHLAKTKKA CCCCEEEEEEECCCCHHHHHCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]