Click here to switch to the map view.

The map label for this gene is yagR [C]

Identifier: 114798763

GI number: 114798763

Start: 2609860

End: 2612046

Strand: Reverse

Name: yagR [C]

Synonym: HNE_2482

Alternate gene names: 114798763

Gene position: 2612046-2609860 (Counterclockwise)

Preceding gene: 114799494

Following gene: 114798408

Centisome position: 70.5

GC content: 63.1

Gene sequence:

>2187_bases
ATGACTGGAATTACGGATCTTTCCCGCCGCGCCTTTATCATTGCCACCGGAGCGACCGGCTTGGCGATTGGTGTTCTTGC
CGCCTGTGCACCCTCCACCCGAGAATCGGATGCCCCGGATGGGCCGCCGCCACCGGAAGTTAACGCCTGGGTGCATATCG
GCACTGATGATGTGGTGACCATTCGCATCGCTCGCTCCGAGATGGGCCAGGGCACGCTGACCGGGCTTGCCCAGCTCGTC
GCCGAAGAGCTTGAGTGCGACTGGGCCAAGGTACGCACAGAATATCCCACACCGGGCCAGAACCTCGCGCGGGACCGCGT
GTGGGGCGACTTCCTGACGGGTGGTAGCCGGGGCATCCGGGCAAGCCATGATTATGTGCGCGAAGGCGGCGCGGCCGCGC
GCGTCATGCTGGTCCAGGCGGCCGCCAACCGGTGGGGCGTCACGCCGGAAGACTGCACTGTGTCCAACAGCGTGATCACG
CATACGGCGTCGGGCAAGACGCTGCGCTTCGGTGAAGTTGTCTCTGATGCTGCCACTCTGACGCCCCCGGAATCCGTGAC
GCTGAAAGACCCCTCTGAGTGGAAGCTTATCGGTAAGGCGGTCCAGCGGCTCGATACGGCCGGCAAGGTGACCGGCGAGC
AGCTTTATGCGACCGACCTGAAATTCGACGGCATGCTGAACGCCGCGATCAAGGCGGCTCCGAAGCGTGGCGGGACTGTA
GCCTCCTTCGACGCTTCCACCGTTTCTGGCATGCCGGGCGTGAAAAAGGTTGTGCAGGTGGATGAGACCGCTGTTGCCGT
GGTTGCCGACAGCTGGTGGCAGGCCAAGACCGCGCTGGATGCCCTGCAGATTGAATGGGCACCGGGCGAAGGGTCTGATT
ATTCGAGCGCCGCGTTCGAGGCCGAGCTTGATGCCGGGCTGACTGCGACGGATGCGTTTATTGGAAATCAGACCGGCGAT
GTCGACGCCGCCTTCCGCGAGGCCTCAAAGGTGGTGGAGGCGAGCTATAATGCGCCTCACCAGAACCATGCCTGTATGGA
GCCGATGAATGCCACCGCCGTGTGGACACCGGAGAAATGCGAAGTCTGGTGCCCCACGCAGAATGGCGAAGCGGCGCTGG
CGGCGGCCTCTGAGGCGGCTGAGCTGCCGATCGAGCAGTGCGAGGTCTACAAGCAGCTACTGGGCGGCGGGTTCGGTCGC
AAGGGCGCAACGGATTATGTCTCGCAAGCGGTGAAGATCGCCAAGCAGATGCCGGGGACGCATATCAAGCTGCTCTGGTC
GCGCGAAGAGGATATGGAGCAGGGCTTCTACCACCCGATCTCCAAAGGCCGCTGCCAGGGGGCGCTGGACGCAGATGGCA
ACCTGATCGGGCTGAAGATCCGCATCTCCGGTCAGTCGATCCTTGCCGGTATCATGCCGCAGGCGCTGGTCAACGGGATG
GATTTTGCGACGTTCCAGGGGCTTCTGCCCGCCGGGACCGATCCACGGTTTGAAGACCAGTCACTGAAATACACTTTTCC
GGCCCTGGTGGTGGACCATGCGATGCGCAATCCGCCGGTGCGGCCCGGTTTCTGGCGCGGCGTGAATGCGAACCAGAACG
CGATTTACCTTGAATGCTTCATGGATGAGCTGGCCCATGCGGCCGGGCGCGATCCGCTGGAATTCCGCCTCGCCCACCTG
CAGAACAGCCCGCAGCTTGCGGCCGTGCTGCAGGCGGTGGCGGATAAATCCGGCTGGGGCGCGGATGACGGGATGTCTCG
CGGGCTCTGCTGCTATTATTCCTTCGGCAGCTATACGGCGGCCTGCGCGGAGGTGACCGTTTCGGATGACGGTGAGCTGA
AGATCCACCGGATCGTGGCGGCGACCGATCCGGGCTATGGGGTAAACCCGCAGCAGATCGATGCGCAGGTGTCCGGATCT
TTTGTGTACGGCCTGTCCGCGATGATGCATCAGGAAGTCACGTTTGTGGACGGCGAAGTCCAGCAGAAGAATTTCGACAC
CTATGACTCGATGCGGATTGCAGAGATGCCGGAGGTCGAAACGCTGGTCATGCCCTCGGGCGGATTCTGGGGCGGGGTCG
GCGAGCCCACGATTGCCGTGGCGCCGCCTGCGGTGCTCAATGCCATCTTCGCGGCGACGGGTAAGCGGATACGCAAGCTT
CCGATCAAGGATCAGGCCCTGCGTTGA

Upstream 100 bases:

>100_bases
TCTTGAGATCACCAATATCTGCCGGTGCGGAACATTCACGCGTGTGCGCAAGGGCGTGCATCTTGCCAAGACCAAGAAAG
CCTGAGGACGGGAGACGGAT

Downstream 100 bases:

>100_bases
TAATGGGCCGGATACGACTTCCGGCCCTGGCGATTGCCTTCCTGCTGCCTGTCATCGCAGCGTGTGGCACTGCGCCGACG
GCGCCTGTGGAGACGCCCGC

Product: putative isoquinoline 1-oxidoreductase subunit beta

Products: NA

Alternate protein names: ALDH [H]

Number of amino acids: Translated: 728; Mature: 727

Protein sequence:

>728_residues
MTGITDLSRRAFIIATGATGLAIGVLAACAPSTRESDAPDGPPPPEVNAWVHIGTDDVVTIRIARSEMGQGTLTGLAQLV
AEELECDWAKVRTEYPTPGQNLARDRVWGDFLTGGSRGIRASHDYVREGGAAARVMLVQAAANRWGVTPEDCTVSNSVIT
HTASGKTLRFGEVVSDAATLTPPESVTLKDPSEWKLIGKAVQRLDTAGKVTGEQLYATDLKFDGMLNAAIKAAPKRGGTV
ASFDASTVSGMPGVKKVVQVDETAVAVVADSWWQAKTALDALQIEWAPGEGSDYSSAAFEAELDAGLTATDAFIGNQTGD
VDAAFREASKVVEASYNAPHQNHACMEPMNATAVWTPEKCEVWCPTQNGEAALAAASEAAELPIEQCEVYKQLLGGGFGR
KGATDYVSQAVKIAKQMPGTHIKLLWSREEDMEQGFYHPISKGRCQGALDADGNLIGLKIRISGQSILAGIMPQALVNGM
DFATFQGLLPAGTDPRFEDQSLKYTFPALVVDHAMRNPPVRPGFWRGVNANQNAIYLECFMDELAHAAGRDPLEFRLAHL
QNSPQLAAVLQAVADKSGWGADDGMSRGLCCYYSFGSYTAACAEVTVSDDGELKIHRIVAATDPGYGVNPQQIDAQVSGS
FVYGLSAMMHQEVTFVDGEVQQKNFDTYDSMRIAEMPEVETLVMPSGGFWGGVGEPTIAVAPPAVLNAIFAATGKRIRKL
PIKDQALR

Sequences:

>Translated_728_residues
MTGITDLSRRAFIIATGATGLAIGVLAACAPSTRESDAPDGPPPPEVNAWVHIGTDDVVTIRIARSEMGQGTLTGLAQLV
AEELECDWAKVRTEYPTPGQNLARDRVWGDFLTGGSRGIRASHDYVREGGAAARVMLVQAAANRWGVTPEDCTVSNSVIT
HTASGKTLRFGEVVSDAATLTPPESVTLKDPSEWKLIGKAVQRLDTAGKVTGEQLYATDLKFDGMLNAAIKAAPKRGGTV
ASFDASTVSGMPGVKKVVQVDETAVAVVADSWWQAKTALDALQIEWAPGEGSDYSSAAFEAELDAGLTATDAFIGNQTGD
VDAAFREASKVVEASYNAPHQNHACMEPMNATAVWTPEKCEVWCPTQNGEAALAAASEAAELPIEQCEVYKQLLGGGFGR
KGATDYVSQAVKIAKQMPGTHIKLLWSREEDMEQGFYHPISKGRCQGALDADGNLIGLKIRISGQSILAGIMPQALVNGM
DFATFQGLLPAGTDPRFEDQSLKYTFPALVVDHAMRNPPVRPGFWRGVNANQNAIYLECFMDELAHAAGRDPLEFRLAHL
QNSPQLAAVLQAVADKSGWGADDGMSRGLCCYYSFGSYTAACAEVTVSDDGELKIHRIVAATDPGYGVNPQQIDAQVSGS
FVYGLSAMMHQEVTFVDGEVQQKNFDTYDSMRIAEMPEVETLVMPSGGFWGGVGEPTIAVAPPAVLNAIFAATGKRIRKL
PIKDQALR
>Mature_727_residues
TGITDLSRRAFIIATGATGLAIGVLAACAPSTRESDAPDGPPPPEVNAWVHIGTDDVVTIRIARSEMGQGTLTGLAQLVA
EELECDWAKVRTEYPTPGQNLARDRVWGDFLTGGSRGIRASHDYVREGGAAARVMLVQAAANRWGVTPEDCTVSNSVITH
TASGKTLRFGEVVSDAATLTPPESVTLKDPSEWKLIGKAVQRLDTAGKVTGEQLYATDLKFDGMLNAAIKAAPKRGGTVA
SFDASTVSGMPGVKKVVQVDETAVAVVADSWWQAKTALDALQIEWAPGEGSDYSSAAFEAELDAGLTATDAFIGNQTGDV
DAAFREASKVVEASYNAPHQNHACMEPMNATAVWTPEKCEVWCPTQNGEAALAAASEAAELPIEQCEVYKQLLGGGFGRK
GATDYVSQAVKIAKQMPGTHIKLLWSREEDMEQGFYHPISKGRCQGALDADGNLIGLKIRISGQSILAGIMPQALVNGMD
FATFQGLLPAGTDPRFEDQSLKYTFPALVVDHAMRNPPVRPGFWRGVNANQNAIYLECFMDELAHAAGRDPLEFRLAHLQ
NSPQLAAVLQAVADKSGWGADDGMSRGLCCYYSFGSYTAACAEVTVSDDGELKIHRIVAATDPGYGVNPQQIDAQVSGSF
VYGLSAMMHQEVTFVDGEVQQKNFDTYDSMRIAEMPEVETLVMPSGGFWGGVGEPTIAVAPPAVLNAIFAATGKRIRKLP
IKDQALR

Specific function: Unknown

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786478, Length=426, Percent_Identity=24.8826291079812, Blast_Score=73, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274
- InterPro:   IPR012368
- InterPro:   IPR006311 [H]

Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.2.99.3 [H]

Molecular weight: Translated: 77648; Mature: 77517

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGITDLSRRAFIIATGATGLAIGVLAACAPSTRESDAPDGPPPPEVNAWVHIGTDDVVT
CCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEE
IRIARSEMGQGTLTGLAQLVAEELECDWAKVRTEYPTPGQNLARDRVWGDFLTGGSRGIR
EEEECCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
ASHDYVREGGAAARVMLVQAAANRWGVTPEDCTVSNSVITHTASGKTLRFGEVVSDAATL
CCHHHHHCCCCHHHHHHEEHHHHHCCCCCCCCCCCCCEEEEECCCCEEEHHHHHHCCCCC
TPPESVTLKDPSEWKLIGKAVQRLDTAGKVTGEQLYATDLKFDGMLNAAIKAAPKRGGTV
CCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEE
ASFDASTVSGMPGVKKVVQVDETAVAVVADSWWQAKTALDALQIEWAPGEGSDYSSAAFE
EECCCHHCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHEEEEEEECCCCCCCCCCHHEE
AELDAGLTATDAFIGNQTGDVDAAFREASKVVEASYNAPHQNHACMEPMNATAVWTPEKC
EHHCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCC
EVWCPTQNGEAALAAASEAAELPIEQCEVYKQLLGGGFGRKGATDYVSQAVKIAKQMPGT
EEECCCCCCCEEEEECCHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC
HIKLLWSREEDMEQGFYHPISKGRCQGALDADGNLIGLKIRISGQSILAGIMPQALVNGM
EEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCC
DFATFQGLLPAGTDPRFEDQSLKYTFPALVVDHAMRNPPVRPGFWRGVNANQNAIYLECF
CHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHH
MDELAHAAGRDPLEFRLAHLQNSPQLAAVLQAVADKSGWGADDGMSRGLCCYYSFGSYTA
HHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEE
ACAEVTVSDDGELKIHRIVAATDPGYGVNPQQIDAQVSGSFVYGLSAMMHQEVTFVDGEV
EEEEEEECCCCCEEEEEEEEECCCCCCCCHHHCCCEECCCHHHHHHHHHHCCEEEECCCC
QQKNFDTYDSMRIAEMPEVETLVMPSGGFWGGVGEPTIAVAPPAVLNAIFAATGKRIRKL
CCCCCCCHHCEEECCCCCCEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHCHHHEEC
PIKDQALR
CCCHHCCC
>Mature Secondary Structure 
TGITDLSRRAFIIATGATGLAIGVLAACAPSTRESDAPDGPPPPEVNAWVHIGTDDVVT
CCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEE
IRIARSEMGQGTLTGLAQLVAEELECDWAKVRTEYPTPGQNLARDRVWGDFLTGGSRGIR
EEEECCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
ASHDYVREGGAAARVMLVQAAANRWGVTPEDCTVSNSVITHTASGKTLRFGEVVSDAATL
CCHHHHHCCCCHHHHHHEEHHHHHCCCCCCCCCCCCCEEEEECCCCEEEHHHHHHCCCCC
TPPESVTLKDPSEWKLIGKAVQRLDTAGKVTGEQLYATDLKFDGMLNAAIKAAPKRGGTV
CCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEE
ASFDASTVSGMPGVKKVVQVDETAVAVVADSWWQAKTALDALQIEWAPGEGSDYSSAAFE
EECCCHHCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHEEEEEEECCCCCCCCCCHHEE
AELDAGLTATDAFIGNQTGDVDAAFREASKVVEASYNAPHQNHACMEPMNATAVWTPEKC
EHHCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCC
EVWCPTQNGEAALAAASEAAELPIEQCEVYKQLLGGGFGRKGATDYVSQAVKIAKQMPGT
EEECCCCCCCEEEEECCHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC
HIKLLWSREEDMEQGFYHPISKGRCQGALDADGNLIGLKIRISGQSILAGIMPQALVNGM
EEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCC
DFATFQGLLPAGTDPRFEDQSLKYTFPALVVDHAMRNPPVRPGFWRGVNANQNAIYLECF
CHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHH
MDELAHAAGRDPLEFRLAHLQNSPQLAAVLQAVADKSGWGADDGMSRGLCCYYSFGSYTA
HHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEE
ACAEVTVSDDGELKIHRIVAATDPGYGVNPQQIDAQVSGSFVYGLSAMMHQEVTFVDGEV
EEEEEEECCCCCEEEEEEEEECCCCCCCCHHHCCCEECCCHHHHHHHHHHCCEEEECCCC
QQKNFDTYDSMRIAEMPEVETLVMPSGGFWGGVGEPTIAVAPPAVLNAIFAATGKRIRKL
CCCCCCCHHCEEECCCCCCEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHCHHHEEC
PIKDQALR
CCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2606906 [H]