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The map label for this gene is 114799457

Identifier: 114799457

GI number: 114799457

Start: 3174276

End: 3174950

Strand: Direct

Name: 114799457

Synonym: HNE_3005

Alternate gene names: NA

Gene position: 3174276-3174950 (Clockwise)

Preceding gene: 114797402

Following gene: 114797147

Centisome position: 85.67

GC content: 65.04

Gene sequence:

>675_bases
ATGTCGCTGATTGCCATGGTTGCCGCTGGCGCGGCGCTTTTTCTACAGCAGAGTATCGGCGCCGAGCTCGCCGCCGCCGA
GGCTGACCGGCTGGAAGCCTGCGTTGCCAAGATCGAGACCGCGCCGGAAGACGCCTATGAAGACGCCCTGGCCTGGACCT
TTGAAGGTAACCGGCCGGGCGCGCGCCAGTGCACCGCGCTGGCCCTGATTGCCCTGGGCAATGTGGAAGAAGGCGCAACG
CGGCTGGAGAACCTCTCCATGTCCAGCGATGGCGGCACGATGGAACAGCGCGCGGTTTACCTCTCCCAGGCTGGCAATGC
CTGGCTGCAGATCGGCGCAGCCGAAGCCGCCGCCGTATCTTTCTCCGAAGCATTGAGACTGGCGCCGGACGAGACCGATC
TGCTGCTCGACCGGGCCACCTCCTATATGCTGATCGACAAATGGGACGAGGCAATGGCCGACCTCAATGCGGCTATTGCC
CAATCGCCCGGCAGAGCGTCGGCCCATCAGATGCGCGCCGAAGTGCATCTCAGCCAGGACGCGCTCGACCTGGCGATGAA
GGATGTCGAGACCGCCATGGCAGCAGACCCGGAAAACATCGACACGCTTCTGGTACGCGGGCGCGTGCGCGAGGCGATGC
GGCTGAAGGCGGAGGGGCGCCAGCTGGAAGACTGA

Upstream 100 bases:

>100_bases
GTCCGAATACAAACAGCAGAGATGGCTGACTTGTCATTTGCCAAGGGTGCTCCAATTGCGCCTAAGAACAATGAGATAGA
GGCTTTGGAGTGTCCTGCCC

Downstream 100 bases:

>100_bases
GCCCCTCCGGCGGCCAGCTCAGTTTGCGTAGATGACAATTTCCTGACGGTTCTGCGCATCCATCGTGAAGTCGCCCACCG
TCAGGCGCTGTCCCTCTTTC

Product: TPR domain-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; TPR Domain Protein; Tetratricopeptide Domain-Containing Protein

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MSLIAMVAAGAALFLQQSIGAELAAAEADRLEACVAKIETAPEDAYEDALAWTFEGNRPGARQCTALALIALGNVEEGAT
RLENLSMSSDGGTMEQRAVYLSQAGNAWLQIGAAEAAAVSFSEALRLAPDETDLLLDRATSYMLIDKWDEAMADLNAAIA
QSPGRASAHQMRAEVHLSQDALDLAMKDVETAMAADPENIDTLLVRGRVREAMRLKAEGRQLED

Sequences:

>Translated_224_residues
MSLIAMVAAGAALFLQQSIGAELAAAEADRLEACVAKIETAPEDAYEDALAWTFEGNRPGARQCTALALIALGNVEEGAT
RLENLSMSSDGGTMEQRAVYLSQAGNAWLQIGAAEAAAVSFSEALRLAPDETDLLLDRATSYMLIDKWDEAMADLNAAIA
QSPGRASAHQMRAEVHLSQDALDLAMKDVETAMAADPENIDTLLVRGRVREAMRLKAEGRQLED
>Mature_223_residues
SLIAMVAAGAALFLQQSIGAELAAAEADRLEACVAKIETAPEDAYEDALAWTFEGNRPGARQCTALALIALGNVEEGATR
LENLSMSSDGGTMEQRAVYLSQAGNAWLQIGAAEAAAVSFSEALRLAPDETDLLLDRATSYMLIDKWDEAMADLNAAIAQ
SPGRASAHQMRAEVHLSQDALDLAMKDVETAMAADPENIDTLLVRGRVREAMRLKAEGRQLED

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23894; Mature: 23763

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIAMVAAGAALFLQQSIGAELAAAEADRLEACVAKIETAPEDAYEDALAWTFEGNRPG
CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEECCCCC
ARQCTALALIALGNVEEGATRLENLSMSSDGGTMEQRAVYLSQAGNAWLQIGAAEAAAVS
HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHH
FSEALRLAPDETDLLLDRATSYMLIDKWDEAMADLNAAIAQSPGRASAHQMRAEVHLSQD
HHHHHHCCCCHHHHHHHHCCCEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHH
ALDLAMKDVETAMAADPENIDTLLVRGRVREAMRLKAEGRQLED
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SLIAMVAAGAALFLQQSIGAELAAAEADRLEACVAKIETAPEDAYEDALAWTFEGNRPG
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEECCCCC
ARQCTALALIALGNVEEGATRLENLSMSSDGGTMEQRAVYLSQAGNAWLQIGAAEAAAVS
HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHH
FSEALRLAPDETDLLLDRATSYMLIDKWDEAMADLNAAIAQSPGRASAHQMRAEVHLSQD
HHHHHHCCCCHHHHHHHHCCCEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHH
ALDLAMKDVETAMAADPENIDTLLVRGRVREAMRLKAEGRQLED
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA