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The map label for this gene is 114797147

Identifier: 114797147

GI number: 114797147

Start: 3177046

End: 3177912

Strand: Direct

Name: 114797147

Synonym: HNE_3008

Alternate gene names: NA

Gene position: 3177046-3177912 (Clockwise)

Preceding gene: 114799457

Following gene: 114798749

Centisome position: 85.75

GC content: 66.67

Gene sequence:

>867_bases
ATGTCCAGTGCCAAAAAGCCCTTTACCGGCCTCGCCCTCGCTCTGGCAGCGATGACTGGCGCCTGTGCCTCGACCGGGCA
AAGCCAGGCGGACAAGGCGTTGTCGCAGGCAGTTGAAGCCGCCCTCGCCCCCGCCCCGCAGGAAGAACGCGACGCCGCCA
ACCGGGCTGATCCGCTGACGCGGGCGAATTTCTGGTCGAAGGAATATCAGAAAGACCCGGAGAACATCGAAACAGCTCTG
CAGTTTGCAGAGTCCCTGCGCGCGATGGGCAGCCAGGACCGGGCGCTGGACGTCGCAACCAAGACGCTGGTGGTTCATCC
CGGCAATCCCGACCTGCTGATGGTGACAGGCCGCGTGCGCATGACGGAAGGCAATTTTGCCGCCGCGCGGGCCGCCTTTG
AAGAAGTAACCCGCACCGCGCCGGAACGCGCCGATGGCTGGGCCGCGCTGGGCACGGCGTTTGACCAGCTGGAAATGCAC
CGTCAGGCGCAGACGAACTATCAACGCGCGCTCACACTCGAGCCATCGCGGACCACGACCCTGACCAATTACGGGCTCTC
CTTGCTGCTGTCAGGCGATCTGGCCGGGGCCGAAGCCCAGTTGCGCGCCGCCGCCGCCCAGCCGGGCGCGGGCAGCCGGG
TCACTGAAAATCTAGCGCTGGTGATCGGCCTGCAGGGGCGGTTTGACGAGATGCAGGCGCTGAGCGCCGCCAATGCCCCG
GACAAGGTTGCCGAACAGAACGCCGCCCTGCTGCGCGGGCTGGTCCAGCCGGCACGTACCTATGACGCGCTGATCGGGGG
CAAGGATACCTCCAGCGCGGCAGCGCCGGGCACGAAACGCCAGCTGCGCGGCACGCTGAACCATTAA

Upstream 100 bases:

>100_bases
TCGGTGGTTAATGGCGAAGGCTCCGGCGTTAACCGAACTTTGACCCGGCCGGGGGCAAAGTCTGCTTCGACCCTCAGGGA
TACATACACGGAGCCTGCCG

Downstream 100 bases:

>100_bases
TCCGTCAACAGATATAAATCTGATCGATCCGGCCGGGCGCTACGCAGGCGCGGCGCGCCCGTGCGTGTTTCAGCCGATGT
CGGCGGGACGCTCGGCCTGC

Product: TPR domain-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; Pilus Assembly Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; TPR Repeat Protein; Tetratricopeptide Repeat Family Protein; Signal Peptide; Tetratricopeptide-Repeat Containing Protein; Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MSSAKKPFTGLALALAAMTGACASTGQSQADKALSQAVEAALAPAPQEERDAANRADPLTRANFWSKEYQKDPENIETAL
QFAESLRAMGSQDRALDVATKTLVVHPGNPDLLMVTGRVRMTEGNFAAARAAFEEVTRTAPERADGWAALGTAFDQLEMH
RQAQTNYQRALTLEPSRTTTLTNYGLSLLLSGDLAGAEAQLRAAAAQPGAGSRVTENLALVIGLQGRFDEMQALSAANAP
DKVAEQNAALLRGLVQPARTYDALIGGKDTSSAAAPGTKRQLRGTLNH

Sequences:

>Translated_288_residues
MSSAKKPFTGLALALAAMTGACASTGQSQADKALSQAVEAALAPAPQEERDAANRADPLTRANFWSKEYQKDPENIETAL
QFAESLRAMGSQDRALDVATKTLVVHPGNPDLLMVTGRVRMTEGNFAAARAAFEEVTRTAPERADGWAALGTAFDQLEMH
RQAQTNYQRALTLEPSRTTTLTNYGLSLLLSGDLAGAEAQLRAAAAQPGAGSRVTENLALVIGLQGRFDEMQALSAANAP
DKVAEQNAALLRGLVQPARTYDALIGGKDTSSAAAPGTKRQLRGTLNH
>Mature_287_residues
SSAKKPFTGLALALAAMTGACASTGQSQADKALSQAVEAALAPAPQEERDAANRADPLTRANFWSKEYQKDPENIETALQ
FAESLRAMGSQDRALDVATKTLVVHPGNPDLLMVTGRVRMTEGNFAAARAAFEEVTRTAPERADGWAALGTAFDQLEMHR
QAQTNYQRALTLEPSRTTTLTNYGLSLLLSGDLAGAEAQLRAAAAQPGAGSRVTENLALVIGLQGRFDEMQALSAANAPD
KVAEQNAALLRGLVQPARTYDALIGGKDTSSAAAPGTKRQLRGTLNH

Specific function: Unknown

COG id: COG5010

COG function: function code U; Flp pilus assembly protein TadD, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30388; Mature: 30257

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAKKPFTGLALALAAMTGACASTGQSQADKALSQAVEAALAPAPQEERDAANRADPLT
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCH
RANFWSKEYQKDPENIETALQFAESLRAMGSQDRALDVATKTLVVHPGNPDLLMVTGRVR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEEEEECCCCCEEEEECEEE
MTEGNFAAARAAFEEVTRTAPERADGWAALGTAFDQLEMHRQAQTNYQRALTLEPSRTTT
EECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCEE
LTNYGLSLLLSGDLAGAEAQLRAAAAQPGAGSRVTENLALVIGLQGRFDEMQALSAANAP
EHHCCEEEEEECCCCCCHHHHHHHHCCCCCCCHHHCCEEEEEECCCCHHHHHHHHHCCCC
DKVAEQNAALLRGLVQPARTYDALIGGKDTSSAAAPGTKRQLRGTLNH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure 
SSAKKPFTGLALALAAMTGACASTGQSQADKALSQAVEAALAPAPQEERDAANRADPLT
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCH
RANFWSKEYQKDPENIETALQFAESLRAMGSQDRALDVATKTLVVHPGNPDLLMVTGRVR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEEEEECCCCCEEEEECEEE
MTEGNFAAARAAFEEVTRTAPERADGWAALGTAFDQLEMHRQAQTNYQRALTLEPSRTTT
EECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCEE
LTNYGLSLLLSGDLAGAEAQLRAAAAQPGAGSRVTENLALVIGLQGRFDEMQALSAANAP
EHHCCEEEEEECCCCCCHHHHHHHHCCCCCCCHHHCCEEEEEECCCCHHHHHHHHHCCCC
DKVAEQNAALLRGLVQPARTYDALIGGKDTSSAAAPGTKRQLRGTLNH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA