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The map label for this gene is ybhR [H]

Identifier: 114799431

GI number: 114799431

Start: 1569019

End: 1570119

Strand: Direct

Name: ybhR [H]

Synonym: HNE_1536

Alternate gene names: 114799431

Gene position: 1569019-1570119 (Clockwise)

Preceding gene: 114800421

Following gene: 114798028

Centisome position: 42.35

GC content: 57.95

Gene sequence:

>1101_bases
ATGTGGCGGCGCTTGCTTGCTCTGATCATCAAGGAGATGCTCGCCATTTGGCGTGATCCCAAGGGGCGCGCGGTGATCCT
TGTGCCCCCCCTTCTTCAACTCGTCATCTTCGCCTTCGCGATGACGATGGAGGTGCGCAATGTCGATATTGCCGTCCTCA
ATCTCGACCACGAAAGGAGCGGCCGGGAAATCGTGGCAGGCTTTGAAGGCGCCTCCGCGTTCGATGAGATCATACAGCTG
CAGTCCGTCAGCCAGATCCGGGAGACTATCGACAGCCAGCGCGTCATTGCGGTGGTTCATATCGGGCAGGACTTCTCCCG
CCGGATCGAAGCGGGTCAGCCGGCAGATGTCCAGATCATCCTTGACGGTCGCAAGTCGAACGCGTCTCAGATCGTCAACT
CGTACCTGTCGGCCATCATCGCGCGTGTGTCGGCAGCGGCATATTCAGGCGGCGCGCCGCCGGAGGCCGTCCAAGTCCGG
CATTGGTTCAACCCAAATCTTGAATATGCCTGGTTCACCCTGCCGGGACTGGTCGCAACCATCACCCTACTGACCACGAT
CATCGTGACGGCCCTGTCGGTTGCCCGCGAGCGCGAACTTGGTACATTCGATCAGCTGCTCGTCTCACCACTCAGGCCGA
TGGAGATCGTCATCGGGAAGTCAGCACCTGGTCTGATCTTCGGCTACCTGCATGGCACCTTCTTTGTTCTCGTGGCCGTA
CTTGGTTTCAAGATTCCCTTTGCTGGGTCGCTGCTCGCGCTCTACGGATCGATGTTTTTCTATCTGCTGGCGGTGATCGG
GATCGGTCTCTTTATTTCCGTGATCTCAGATACCCAGCAACAGGCGATACTCGGTGCCTTTGTTTTCGCCTCGCCTGCGG
TGCTTCTGTCTGGCTTCATGTCACCGGTTGAGAACATGCCAGGCTGGATGCAACTGGCGACGCAGATCAATCCGCTCCGG
CACTTCCTCGTCATAACTCAAGGCGTGTTTCTGAAGGATCTGCCACTGTCCGAGGTTGCGCGCAGTACAGCACCGCTCAT
CGTGATCGCAATGGTGACGCTGCCGGCCTCTGCCTGGTTACTCAGAAAGAAGACATCATAG

Upstream 100 bases:

>100_bases
GTCTGGTCGGTTCTATGGCCAGCGATCCTGAAGATGCTGGCCGTCGGCACCTTTTTCCTGATGCTGACATGGCTGGCTAC
GCCGAAGCGGATCGCCTGAC

Downstream 100 bases:

>100_bases
ATGGCAAAGCGCAGTGATCCTCGAAGCGTTGAAACGCGCGAACGGCTCGTCGAGGCCGCTATCGAACTGTTCGGCGTTGT
GGGATTCGACGGAACATCCA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MWRRLLALIIKEMLAIWRDPKGRAVILVPPLLQLVIFAFAMTMEVRNVDIAVLNLDHERSGREIVAGFEGASAFDEIIQL
QSVSQIRETIDSQRVIAVVHIGQDFSRRIEAGQPADVQIILDGRKSNASQIVNSYLSAIIARVSAAAYSGGAPPEAVQVR
HWFNPNLEYAWFTLPGLVATITLLTTIIVTALSVARERELGTFDQLLVSPLRPMEIVIGKSAPGLIFGYLHGTFFVLVAV
LGFKIPFAGSLLALYGSMFFYLLAVIGIGLFISVISDTQQQAILGAFVFASPAVLLSGFMSPVENMPGWMQLATQINPLR
HFLVITQGVFLKDLPLSEVARSTAPLIVIAMVTLPASAWLLRKKTS

Sequences:

>Translated_366_residues
MWRRLLALIIKEMLAIWRDPKGRAVILVPPLLQLVIFAFAMTMEVRNVDIAVLNLDHERSGREIVAGFEGASAFDEIIQL
QSVSQIRETIDSQRVIAVVHIGQDFSRRIEAGQPADVQIILDGRKSNASQIVNSYLSAIIARVSAAAYSGGAPPEAVQVR
HWFNPNLEYAWFTLPGLVATITLLTTIIVTALSVARERELGTFDQLLVSPLRPMEIVIGKSAPGLIFGYLHGTFFVLVAV
LGFKIPFAGSLLALYGSMFFYLLAVIGIGLFISVISDTQQQAILGAFVFASPAVLLSGFMSPVENMPGWMQLATQINPLR
HFLVITQGVFLKDLPLSEVARSTAPLIVIAMVTLPASAWLLRKKTS
>Mature_366_residues
MWRRLLALIIKEMLAIWRDPKGRAVILVPPLLQLVIFAFAMTMEVRNVDIAVLNLDHERSGREIVAGFEGASAFDEIIQL
QSVSQIRETIDSQRVIAVVHIGQDFSRRIEAGQPADVQIILDGRKSNASQIVNSYLSAIIARVSAAAYSGGAPPEAVQVR
HWFNPNLEYAWFTLPGLVATITLLTTIIVTALSVARERELGTFDQLLVSPLRPMEIVIGKSAPGLIFGYLHGTFFVLVAV
LGFKIPFAGSLLALYGSMFFYLLAVIGIGLFISVISDTQQQAILGAFVFASPAVLLSGFMSPVENMPGWMQLATQINPLR
HFLVITQGVFLKDLPLSEVARSTAPLIVIAMVTLPASAWLLRKKTS

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=366, Percent_Identity=45.6284153005465, Blast_Score=330, Evalue=9e-92,
Organism=Escherichia coli, GI1787011, Length=339, Percent_Identity=31.5634218289086, Blast_Score=154, Evalue=6e-39,
Organism=Escherichia coli, GI48994943, Length=373, Percent_Identity=27.8820375335121, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI226510979, Length=346, Percent_Identity=26.5895953757225, Blast_Score=105, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 40051; Mature: 40051

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRRLLALIIKEMLAIWRDPKGRAVILVPPLLQLVIFAFAMTMEVRNVDIAVLNLDHERS
CHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
GREIVAGFEGASAFDEIIQLQSVSQIRETIDSQRVIAVVHIGQDFSRRIEAGQPADVQII
CCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCEEEE
LDGRKSNASQIVNSYLSAIIARVSAAAYSGGAPPEAVQVRHWFNPNLEYAWFTLPGLVAT
EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEHHHHHHH
ITLLTTIIVTALSVARERELGTFDQLLVSPLRPMEIVIGKSAPGLIFGYLHGTFFVLVAV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
LGFKIPFAGSLLALYGSMFFYLLAVIGIGLFISVISDTQQQAILGAFVFASPAVLLSGFM
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SPVENMPGWMQLATQINPLRHFLVITQGVFLKDLPLSEVARSTAPLIVIAMVTLPASAWL
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHCCCCHHHHHHHHHCCHHHH
LRKKTS
HHCCCC
>Mature Secondary Structure
MWRRLLALIIKEMLAIWRDPKGRAVILVPPLLQLVIFAFAMTMEVRNVDIAVLNLDHERS
CHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
GREIVAGFEGASAFDEIIQLQSVSQIRETIDSQRVIAVVHIGQDFSRRIEAGQPADVQII
CCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCEEEE
LDGRKSNASQIVNSYLSAIIARVSAAAYSGGAPPEAVQVRHWFNPNLEYAWFTLPGLVAT
EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEHHHHHHH
ITLLTTIIVTALSVARERELGTFDQLLVSPLRPMEIVIGKSAPGLIFGYLHGTFFVLVAV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
LGFKIPFAGSLLALYGSMFFYLLAVIGIGLFISVISDTQQQAILGAFVFASPAVLLSGFM
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SPVENMPGWMQLATQINPLRHFLVITQGVFLKDLPLSEVARSTAPLIVIAMVTLPASAWL
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHCCCCHHHHHHHHHCCHHHH
LRKKTS
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]