| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799419
Identifier: 114799419
GI number: 114799419
Start: 1303379
End: 1303867
Strand: Reverse
Name: 114799419
Synonym: HNE_1274
Alternate gene names: NA
Gene position: 1303867-1303379 (Counterclockwise)
Preceding gene: 114800173
Following gene: 114797499
Centisome position: 35.19
GC content: 63.19
Gene sequence:
>489_bases ATGGCCAAGGCGCTGAAAGCTCACAAACCCGTCGCTGAAGAATACCTCGCCACCGCCAAGCAATCGACCGTCGTTCACCG CTTTCCCTTCCCGCCTGAAATGGTCTGGAACGCTCTGCTTGATGCTGAAGCGTGGACCCAGTGGCTGCCGATCACCAAAG TCACCTGGACCAGCCCGAAACCCTTCGGCCCCGGCACCACCCGCACGGTTGAAGTCGGCGATCAGCAGATCGAGGAAACC TTCTTCGCCTGGGAAGAGGGCGCCCGCATGGCTTTCCGTTTTGAGCGCTCCAGCCTGCCGGTCTCGGCGGCGGTTGAAGA TTACCGGGTCGTGCCCGTCGAAGGCGGCTGCGAAATGCACTGGTCCGGCAAGGCCAGCGCGCCCTTGTTCCTCGGCGGCG TCGTCACCGGCCAGCTCACCAAGGGCCTGAAAGAAGGCATGCCGAAACTCGAAGCCCTGATCGCGGCCGAACCGGAGCGG TTCAGGTAG
Upstream 100 bases:
>100_bases CGGCGTTCCGTAGACGGTGCTTGCAAATGCCGCCTATACTGCGCGCTGGACAGTGATTGCCCGCCGCATCGTGAAGCGGG CCACCACCCGGAGAATTGTC
Downstream 100 bases:
>100_bases CTTTTATTGCATTGGGCGCCGATCACATTCAGCCGTAGTATAAGCGTCCAGATAGGTGCGCCCGAAACAGGCAATCAGTC CGTTAACGACCCCCAAGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MAKALKAHKPVAEEYLATAKQSTVVHRFPFPPEMVWNALLDAEAWTQWLPITKVTWTSPKPFGPGTTRTVEVGDQQIEET FFAWEEGARMAFRFERSSLPVSAAVEDYRVVPVEGGCEMHWSGKASAPLFLGGVVTGQLTKGLKEGMPKLEALIAAEPER FR
Sequences:
>Translated_162_residues MAKALKAHKPVAEEYLATAKQSTVVHRFPFPPEMVWNALLDAEAWTQWLPITKVTWTSPKPFGPGTTRTVEVGDQQIEET FFAWEEGARMAFRFERSSLPVSAAVEDYRVVPVEGGCEMHWSGKASAPLFLGGVVTGQLTKGLKEGMPKLEALIAAEPER FR >Mature_161_residues AKALKAHKPVAEEYLATAKQSTVVHRFPFPPEMVWNALLDAEAWTQWLPITKVTWTSPKPFGPGTTRTVEVGDQQIEETF FAWEEGARMAFRFERSSLPVSAAVEDYRVVPVEGGCEMHWSGKASAPLFLGGVVTGQLTKGLKEGMPKLEALIAAEPERF R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019587 [H]
Pfam domain/function: PF10604 Polyketide_cyc2 [H]
EC number: NA
Molecular weight: Translated: 17989; Mature: 17858
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKALKAHKPVAEEYLATAKQSTVVHRFPFPPEMVWNALLDAEAWTQWLPITKVTWTSPK CCCCCCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCC PFGPGTTRTVEVGDQQIEETFFAWEEGARMAFRFERSSLPVSAAVEDYRVVPVEGGCEMH CCCCCCCEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCCCEEECCCEEEEEECCCCEEE WSGKASAPLFLGGVVTGQLTKGLKEGMPKLEALIAAEPERFR ECCCCCCCEEECHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC >Mature Secondary Structure AKALKAHKPVAEEYLATAKQSTVVHRFPFPPEMVWNALLDAEAWTQWLPITKVTWTSPK CCCCCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCC PFGPGTTRTVEVGDQQIEETFFAWEEGARMAFRFERSSLPVSAAVEDYRVVPVEGGCEMH CCCCCCCEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCCCEEECCCEEEEEECCCCEEE WSGKASAPLFLGGVVTGQLTKGLKEGMPKLEALIAAEPERFR ECCCCCCCEEECHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]