| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is glpK [H]
Identifier: 114799418
GI number: 114799418
Start: 1367752
End: 1369233
Strand: Direct
Name: glpK [H]
Synonym: HNE_1335
Alternate gene names: 114799418
Gene position: 1367752-1369233 (Clockwise)
Preceding gene: 114800494
Following gene: 114799350
Centisome position: 36.92
GC content: 68.62
Gene sequence:
>1482_bases ATGAGCGACTTTATTCTCGTGATCGACGAAGGCACGACCTCGACGCGGGCGATCGTCTATGACCGCGACTTTCGCGAGGT GGCCCTCGCGCAGGAAGAGGTGGCGCTGGCCTATCCCCGCGATGGCTGGGTGGAGCAGGATGGCGAGGAGATCTGGACGC GGACGCTGTCGGTCTGCCGGGCGGTGATCGCCAAGGCGGGCGGGGCGGCGCGGATTGCGGCGATCGGCATCACCAACCAG CGCGAGACGACGCTCGTCTGGGACCGCAAGACCGGCAAGCCGCTGGCGCCGGCCATCATCTGGCAGGACCGGCGCACGGC GGCGTTCTGTGAAAGCCTCAAGGCGAAGGGCTATGAGAGCGATGTGCAGGCCGAGACCGGCCTGCTGCTGGACCCGTATT TCTCCGGCACGAAAATAAACTGGGTACTGAATAATGTTCCCGGCGCGCAGGCGCGCGCAGAGGCCGGGGAACTGGCCTTC GGGACGGTGGACAGTTTTCTGCTGTGGCGGCTGACGGGCGGGACGGTGCATGCCACCGATGTGACGAATGCGTCGCGCAC GCTGCTCTACCGGCTGGGTATCGGCGGCGAGGGGGGCTGGAGCGCGGCGATGGGCGAGATGCTTGGCGTGCCCGCGGCCA TGTTGCCCGAGGTGAAGCCGAGCGCGGCGGATTTTGGCACGGCAGGGGCGGCGCTGTTCGGCGCGGCGATCCCGGTGGCG TCGATCCTGGGGGATCAGCAATCGGCGCTGGTGGGGCAGGGGTGTCTCGCGCCGGGGCAGGCGAAGATCACGTTTGGCAC GGGCGCGTTCCTGGTGGCGAATACGGGCGCGGCCCGGCCGTTTTCGGAGAACAGATTGCTGGGCACGATGGGCTACGCGC TGCCCGGCGCCGACGCGATGGCGCTGGAAGGCTCGATCTTCAATGCGGGCACGGTGATCAAATGGCTGCGCGATGATCTG GGACTTATTCAGAGGGCGGATGAAAGCGCAGCCGCCGCGGCGAGCCTGAAGGATAATGGCGGCGTCTATATGGTGCCCGC CCTCACCGGGCTTGGCGCGCCGCATTGGGACGCCGAAGCAAGGGGGCTGATCGCCGGGCTGACGCGGGCGGCGACGGGGG CGCATCTGGTGCGCGCGGGGCTGGAATCGGTGGCCTATCAGACGCATGACCTGCTCGCCGCGTTTGCGGGCGACGGCGCG CCGATTGGCGAGCTGCGCGTGGATGGCGGCATGGTGGGGAATGACTGGCTGATGCAGTTTCTGGCGAATGTGTGCGCGCT GCCGGTGCTGCGGCCGGACTATCGCGAGATGACGGCGCTGGGCGCAGCGGCGGCTGCGGCGATGCAGATCGGCTGGCTGA GCGCCGCCGACTGGGCGGCCCGCGAAGTGCCGGGCAAACGCTTCGAGCCAGATATGAGCGCTGACGCCCGCGCCGCGCTT CTGAAGGGCTGGCAAACCGCGCTCGGCCGCGCGCTGACCTGA
Upstream 100 bases:
>100_bases TGGGCGGGCTGCCCATCGGGTTCCAGCTGATCGGGGCGCCGTTTGCGGACAGGACGACGCTGCGCTTCGCATCTCTGCTG GAAGCTGCGGGGCTGATCGA
Downstream 100 bases:
>100_bases ATACTTCTCAGGCGCGCAGCCATAAAAAAGGGCGGCCCGGAAGCCGCCCTTTTCATTTTGGGTATACCCGGACCTACATG TTGCAGGCGGTGTTGAGGAA
Product: glycerol kinase
Products: NA
Alternate protein names: ATP:glycerol 3-phosphotransferase; Glycerokinase; GK [H]
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MSDFILVIDEGTTSTRAIVYDRDFREVALAQEEVALAYPRDGWVEQDGEEIWTRTLSVCRAVIAKAGGAARIAAIGITNQ RETTLVWDRKTGKPLAPAIIWQDRRTAAFCESLKAKGYESDVQAETGLLLDPYFSGTKINWVLNNVPGAQARAEAGELAF GTVDSFLLWRLTGGTVHATDVTNASRTLLYRLGIGGEGGWSAAMGEMLGVPAAMLPEVKPSAADFGTAGAALFGAAIPVA SILGDQQSALVGQGCLAPGQAKITFGTGAFLVANTGAARPFSENRLLGTMGYALPGADAMALEGSIFNAGTVIKWLRDDL GLIQRADESAAAAASLKDNGGVYMVPALTGLGAPHWDAEARGLIAGLTRAATGAHLVRAGLESVAYQTHDLLAAFAGDGA PIGELRVDGGMVGNDWLMQFLANVCALPVLRPDYREMTALGAAAAAAMQIGWLSAADWAAREVPGKRFEPDMSADARAAL LKGWQTALGRALT
Sequences:
>Translated_493_residues MSDFILVIDEGTTSTRAIVYDRDFREVALAQEEVALAYPRDGWVEQDGEEIWTRTLSVCRAVIAKAGGAARIAAIGITNQ RETTLVWDRKTGKPLAPAIIWQDRRTAAFCESLKAKGYESDVQAETGLLLDPYFSGTKINWVLNNVPGAQARAEAGELAF GTVDSFLLWRLTGGTVHATDVTNASRTLLYRLGIGGEGGWSAAMGEMLGVPAAMLPEVKPSAADFGTAGAALFGAAIPVA SILGDQQSALVGQGCLAPGQAKITFGTGAFLVANTGAARPFSENRLLGTMGYALPGADAMALEGSIFNAGTVIKWLRDDL GLIQRADESAAAAASLKDNGGVYMVPALTGLGAPHWDAEARGLIAGLTRAATGAHLVRAGLESVAYQTHDLLAAFAGDGA PIGELRVDGGMVGNDWLMQFLANVCALPVLRPDYREMTALGAAAAAAMQIGWLSAADWAAREVPGKRFEPDMSADARAAL LKGWQTALGRALT >Mature_492_residues SDFILVIDEGTTSTRAIVYDRDFREVALAQEEVALAYPRDGWVEQDGEEIWTRTLSVCRAVIAKAGGAARIAAIGITNQR ETTLVWDRKTGKPLAPAIIWQDRRTAAFCESLKAKGYESDVQAETGLLLDPYFSGTKINWVLNNVPGAQARAEAGELAFG TVDSFLLWRLTGGTVHATDVTNASRTLLYRLGIGGEGGWSAAMGEMLGVPAAMLPEVKPSAADFGTAGAALFGAAIPVAS ILGDQQSALVGQGCLAPGQAKITFGTGAFLVANTGAARPFSENRLLGTMGYALPGADAMALEGSIFNAGTVIKWLRDDLG LIQRADESAAAAASLKDNGGVYMVPALTGLGAPHWDAEARGLIAGLTRAATGAHLVRAGLESVAYQTHDLLAAFAGDGAP IGELRVDGGMVGNDWLMQFLANVCALPVLRPDYREMTALGAAAAAAMQIGWLSAADWAAREVPGKRFEPDMSADARAALL KGWQTALGRALT
Specific function: Key enzyme in the regulation of glycerol uptake and metabolism [H]
COG id: COG0554
COG function: function code C; Glycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGGY kinase family [H]
Homologues:
Organism=Homo sapiens, GI189409120, Length=504, Percent_Identity=42.6587301587302, Blast_Score=366, Evalue=1e-101, Organism=Homo sapiens, GI4504007, Length=504, Percent_Identity=42.6587301587302, Blast_Score=365, Evalue=1e-101, Organism=Homo sapiens, GI42794763, Length=510, Percent_Identity=41.9607843137255, Blast_Score=362, Evalue=1e-100, Organism=Homo sapiens, GI41393575, Length=502, Percent_Identity=39.6414342629482, Blast_Score=339, Evalue=3e-93, Organism=Homo sapiens, GI88196792, Length=510, Percent_Identity=31.3725490196078, Blast_Score=259, Evalue=3e-69, Organism=Escherichia coli, GI1790361, Length=493, Percent_Identity=47.4645030425963, Blast_Score=453, Evalue=1e-128, Organism=Escherichia coli, GI1790005, Length=491, Percent_Identity=27.2912423625255, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1789987, Length=452, Percent_Identity=26.5486725663717, Blast_Score=99, Evalue=7e-22, Organism=Escherichia coli, GI1789168, Length=477, Percent_Identity=25.5765199161426, Blast_Score=76, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17535599, Length=498, Percent_Identity=37.5502008032129, Blast_Score=328, Evalue=4e-90, Organism=Caenorhabditis elegans, GI71986140, Length=523, Percent_Identity=25.0478011472275, Blast_Score=162, Evalue=5e-40, Organism=Caenorhabditis elegans, GI71986147, Length=300, Percent_Identity=27.6666666666667, Blast_Score=107, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6321755, Length=489, Percent_Identity=32.5153374233129, Blast_Score=244, Evalue=2e-65, Organism=Drosophila melanogaster, GI17864214, Length=509, Percent_Identity=40.4715127701375, Blast_Score=352, Evalue=4e-97, Organism=Drosophila melanogaster, GI24654573, Length=449, Percent_Identity=41.2026726057906, Blast_Score=327, Evalue=1e-89, Organism=Drosophila melanogaster, GI24655555, Length=508, Percent_Identity=37.007874015748, Blast_Score=314, Evalue=1e-85, Organism=Drosophila melanogaster, GI24655560, Length=508, Percent_Identity=37.007874015748, Blast_Score=314, Evalue=1e-85, Organism=Drosophila melanogaster, GI24655570, Length=508, Percent_Identity=37.007874015748, Blast_Score=314, Evalue=1e-85, Organism=Drosophila melanogaster, GI24655574, Length=508, Percent_Identity=37.007874015748, Blast_Score=314, Evalue=1e-85, Organism=Drosophila melanogaster, GI24655565, Length=508, Percent_Identity=37.007874015748, Blast_Score=314, Evalue=1e-85, Organism=Drosophila melanogaster, GI19922058, Length=531, Percent_Identity=29.9435028248588, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24652871, Length=496, Percent_Identity=29.8387096774194, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24656367, Length=492, Percent_Identity=29.2682926829268, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI21357867, Length=504, Percent_Identity=28.5714285714286, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24656372, Length=348, Percent_Identity=30.7471264367816, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI45552909, Length=270, Percent_Identity=30, Blast_Score=97, Evalue=3e-20,
Paralogues:
None
Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000577 - InterPro: IPR018485 - InterPro: IPR018483 - InterPro: IPR018484 - InterPro: IPR005999 [H]
Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]
EC number: =2.7.1.30 [H]
Molecular weight: Translated: 51622; Mature: 51491
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00933 FGGY_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFILVIDEGTTSTRAIVYDRDFREVALAQEEVALAYPRDGWVEQDGEEIWTRTLSVCR CCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHH AVIAKAGGAARIAAIGITNQRETTLVWDRKTGKPLAPAIIWQDRRTAAFCESLKAKGYES HHHHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHCCCCC DVQAETGLLLDPYFSGTKINWVLNNVPGAQARAEAGELAFGTVDSFLLWRLTGGTVHATD CCCCCCCCEECCCCCCCEEEEEEECCCCCHHHCCCCCEEEHHHHHEEEEEEECCEEEEEE VTNASRTLLYRLGIGGEGGWSAAMGEMLGVPAAMLPEVKPSAADFGTAGAALFGAAIPVA CCCCCEEEEEEECCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHH SILGDQQSALVGQGCLAPGQAKITFGTGAFLVANTGAARPFSENRLLGTMGYALPGADAM HHHCCCHHHHHCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCE ALEGSIFNAGTVIKWLRDDLGLIQRADESAAAAASLKDNGGVYMVPALTGLGAPHWDAEA EECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEEHHCCCCCCCCCHH RGLIAGLTRAATGAHLVRAGLESVAYQTHDLLAAFAGDGAPIGELRVDGGMVGNDWLMQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHH LANVCALPVLRPDYREMTALGAAAAAAMQIGWLSAADWAAREVPGKRFEPDMSADARAAL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCHHHHHH LKGWQTALGRALT HHHHHHHHHCCCC >Mature Secondary Structure SDFILVIDEGTTSTRAIVYDRDFREVALAQEEVALAYPRDGWVEQDGEEIWTRTLSVCR CCEEEEEECCCCCCEEEEEECCHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHH AVIAKAGGAARIAAIGITNQRETTLVWDRKTGKPLAPAIIWQDRRTAAFCESLKAKGYES HHHHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHCCCCC DVQAETGLLLDPYFSGTKINWVLNNVPGAQARAEAGELAFGTVDSFLLWRLTGGTVHATD CCCCCCCCEECCCCCCCEEEEEEECCCCCHHHCCCCCEEEHHHHHEEEEEEECCEEEEEE VTNASRTLLYRLGIGGEGGWSAAMGEMLGVPAAMLPEVKPSAADFGTAGAALFGAAIPVA CCCCCEEEEEEECCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHH SILGDQQSALVGQGCLAPGQAKITFGTGAFLVANTGAARPFSENRLLGTMGYALPGADAM HHHCCCHHHHHCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCE ALEGSIFNAGTVIKWLRDDLGLIQRADESAAAAASLKDNGGVYMVPALTGLGAPHWDAEA EECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEEHHCCCCCCCCCHH RGLIAGLTRAATGAHLVRAGLESVAYQTHDLLAAFAGDGAPIGELRVDGGMVGNDWLMQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHH LANVCALPVLRPDYREMTALGAAAAAAMQIGWLSAADWAAREVPGKRFEPDMSADARAAL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCHHHHHH LKGWQTALGRALT HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA