| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is malT [H]
Identifier: 114799415
GI number: 114799415
Start: 2632591
End: 2635284
Strand: Direct
Name: malT [H]
Synonym: HNE_2502
Alternate gene names: 114799415
Gene position: 2632591-2635284 (Clockwise)
Preceding gene: 114800385
Following gene: 114797626
Centisome position: 71.05
GC content: 60.17
Gene sequence:
>2694_bases GTGCGAACCCTGTCATGCATGTCGTCATCTGAACCAGATATTGCGCCCTGGCTGCTCAGGTCAAAGGTCACGCCGCCGCG GCAGCTGTTGTCGCTCATACGACGCCCTGATCTCATCCAAAGGCTGGAAACAGGCGCAGAGGGCAGCCTCATCATGCTGG AGGCGCCCGGCGGCTATGGCAAAAGCTGTCTTCTGAGCGAGTGGAAGGATCAGTCCGCAAGGCAGGGCGCAAAAGTCTGC TGGCTTGCCATCGATGAAGACGACGATGTCGAAACCTTCATCGCTTATCTCGCCTATTCGGCTCACATCGCCGGCATCGA CACGGCGGGCTCCGGTCTGCTGAACTTCGAGTTGTCCAGTGACGGGAATCCCAGCCAGGCGATCTGGCAGTTTCTCGCCC GGATCGAGCGGTCAGGCCACCCGGTTCATATCGTGCTTGATGACTTTGAGCGGCTCTCGCCGGCTGTGAGCCGTCTGGTC ATTCCGACGCTGCTGCGGCGCCTGCCAGAGAACGCCACCCTGGTGATCGCCTCGCGTGGTGCTGTAGACATCAGCACGGT CGATTTTGACCATCGCGGCCTGGTCACCCGGCTCGGTCCGGCAGACCTGTCCTTCGGCCTCCAGGAAATGACCCGCCTCT GGAAGGGCCGGCTGACTCCGCGCCAGATTGAGCGTCTTTCTGAATGGACCGAAGGATGGCCCGTCCTCATCCGCCTCCTG CTGACGGCTTCGGATATGGGCACATTCGATATCCGGCATATCGATGAACCCGGTTATCGCGACATGGCCATCCCGGCCTA TTTCGAAGAAAAGATCCTTAGCCGGATAGATTGGGACCTTATGGTTTTCCTGCGGGAAGCCTCTGTTTTCGAAGAAATCC CGTTCGATGCCATACAGGAGGTTCTCGATCAGGACGATCCTGACTTCTGGCGGCGCCTGGAATCTCTGGAAGCCTTTCTG GTGCCGCTCTCAGGCGAGCGGTCAGGCTATCGGCTGCATCCGATGATGCGGGAGTACCTCAGACAAACCCTCAGTGAACA GCAGCCTGGAAGGTATGGCGCGCTGCAGGTCAGGGCGGCAAACTGGTATTCCGACAGGGGAAACCATGTGCGCGCCGTCA AACACGCACTGGCCGCCGGTGATGAAACACTGCTGATTGAAATTCTTGAGCAGACCGGCGGAATCCGCCTCTGGCTTCAG GAAGGCCTGATCGAGTTTCGCGCCATTGACCGTCACCTGAAGCCCGAGATCGTGCAGAAATCGCCGACCTCGGCCCTGAT GCGGTGTGTCATCCTGATGAAATCGGGCAAGCAGTCTGACGCGGCCGCGCTCTATGACGGGATTATTGCCCGTCACAGAG CGCGGATCGCTGCCGATGATCTGCTCTCGATCTCCAGCACCGTGATGCGGGTCATGCTCGCCGTCTATGGCGGCAACAAG ATCAATGATCAGGACGTTCAGCAGATTGAAGATGCCATCCGCAGACCAGAACGCGTATTCGAACATTTTGAAGGCTTCAT ACTGACATTCAAATGTCTCGCTGCGCATCAGGCCGGAAAGCTCCGGGACGCCATTCAGTTTGCCCATGAGGCGCTCGACG TCTTCCACGTCTCCGGTTCGCTCTATGGCGAAGTCTACATTCATATCCACCTCGCCATGATCCATTCCTTTATGCGCCAG ACCGATGAGAGCGTCGGCGAGTTCAGGCAGGCATCCGACCTGATCCGCAGGGATCTTTCCTTCGAGGGCGGCATAAAATA TCTCAACGACGTGATCGCGATCGAGGCGCGCCATGAACACGCCCCCTATGATCAGAAGGATATGCCGCGCCTGAAGAATC TTGTGGCCCGCCTGCTGCGGGCAGAAGGGTGGATCGACATTTATTCCGGCGCTTTCAGGACCCTCTCGGAGCAGATCTAT CTGGCTGGCAGCCTGGACGATGCGCTCCATGTCCTGAGCCTCGCTCTTGATTTTTCACGCCGCAACCGGATCACCTCGCT CACCCGCATCTGCGAGGCCCAGCGCGAAATTCTGTCGCTCATCTCCTCTGCTCCCCGACAATCCGGCGGAGGGGCTGTGG CGCACGATGCATATGATCCGATACCTGCCCTCGCCACCTCGCCCTGGCGGGTCGTTGAGGCAGAGTGTGAACGCCACCTT CATCTGGCACGGTCTGGAGAGGTTACCCCCAATCTGGAGCGCGTGACGGCCTTTCGCGATGACCAGCTGGCGGAAGGCAA CCTCCGCGTTGCCACGCGCATCAGCGCCCTGCTCGCCCTGGTGTCCTCTGGCCGGGATCTTGAGCGCAGCCTCGGCATTC TCGAGGAGGCTCTCGACGACAATCGCTTTGGCCGGGCAACCCTGTTCGTCGAGGATATCCTACGCGCGCAGATCGCCGGA GCCGGTCTGGCTGCCCGGTTTCCGCAGCTCTTCGCCCGTCTCTCCGCACGCCCCCGACCCGCCGCTGGCGAGGCACCCGG CGGCAGGCGCGAGTCCATCGTGACGCAGAAAGAATGGGCTGTGCTTCGGGAGCTTCACAAAGGACAAACCGACAAACAGA TCGCGCTCACGATCGGGGTCACCGAGCATGCCATCCGCTACCATCTAAAAAACATCTACGCGAAACTGAATGCGCGCACG CGGCAGGAAGCGGTTCAGCGCGCCGCCGCGCTCGGGCTCCTGACGCTGTCCTGA
Upstream 100 bases:
>100_bases ATCAGGTCAGGCCCGTTATTAGTGCCACTTCCTAATCAGGTGGGAAAGGGTATTATCCCGGCGCGCGGTGGCATGCCCGA GCTTGACGCAAGGCCTGCTT
Downstream 100 bases:
>100_bases TTGCGCCCGGCCGCGCAGACGGCCCGAAATGCCCCCGGAAATGGCCGCGCCGGAGCCGGAACTACTAATCCTGTAAGCAA CCTACTAATTTAAGCCAGAC
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: ATP-dependent transcriptional activator malT [H]
Number of amino acids: Translated: 897; Mature: 897
Protein sequence:
>897_residues MRTLSCMSSSEPDIAPWLLRSKVTPPRQLLSLIRRPDLIQRLETGAEGSLIMLEAPGGYGKSCLLSEWKDQSARQGAKVC WLAIDEDDDVETFIAYLAYSAHIAGIDTAGSGLLNFELSSDGNPSQAIWQFLARIERSGHPVHIVLDDFERLSPAVSRLV IPTLLRRLPENATLVIASRGAVDISTVDFDHRGLVTRLGPADLSFGLQEMTRLWKGRLTPRQIERLSEWTEGWPVLIRLL LTASDMGTFDIRHIDEPGYRDMAIPAYFEEKILSRIDWDLMVFLREASVFEEIPFDAIQEVLDQDDPDFWRRLESLEAFL VPLSGERSGYRLHPMMREYLRQTLSEQQPGRYGALQVRAANWYSDRGNHVRAVKHALAAGDETLLIEILEQTGGIRLWLQ EGLIEFRAIDRHLKPEIVQKSPTSALMRCVILMKSGKQSDAAALYDGIIARHRARIAADDLLSISSTVMRVMLAVYGGNK INDQDVQQIEDAIRRPERVFEHFEGFILTFKCLAAHQAGKLRDAIQFAHEALDVFHVSGSLYGEVYIHIHLAMIHSFMRQ TDESVGEFRQASDLIRRDLSFEGGIKYLNDVIAIEARHEHAPYDQKDMPRLKNLVARLLRAEGWIDIYSGAFRTLSEQIY LAGSLDDALHVLSLALDFSRRNRITSLTRICEAQREILSLISSAPRQSGGGAVAHDAYDPIPALATSPWRVVEAECERHL HLARSGEVTPNLERVTAFRDDQLAEGNLRVATRISALLALVSSGRDLERSLGILEEALDDNRFGRATLFVEDILRAQIAG AGLAARFPQLFARLSARPRPAAGEAPGGRRESIVTQKEWAVLRELHKGQTDKQIALTIGVTEHAIRYHLKNIYAKLNART RQEAVQRAAALGLLTLS
Sequences:
>Translated_897_residues MRTLSCMSSSEPDIAPWLLRSKVTPPRQLLSLIRRPDLIQRLETGAEGSLIMLEAPGGYGKSCLLSEWKDQSARQGAKVC WLAIDEDDDVETFIAYLAYSAHIAGIDTAGSGLLNFELSSDGNPSQAIWQFLARIERSGHPVHIVLDDFERLSPAVSRLV IPTLLRRLPENATLVIASRGAVDISTVDFDHRGLVTRLGPADLSFGLQEMTRLWKGRLTPRQIERLSEWTEGWPVLIRLL LTASDMGTFDIRHIDEPGYRDMAIPAYFEEKILSRIDWDLMVFLREASVFEEIPFDAIQEVLDQDDPDFWRRLESLEAFL VPLSGERSGYRLHPMMREYLRQTLSEQQPGRYGALQVRAANWYSDRGNHVRAVKHALAAGDETLLIEILEQTGGIRLWLQ EGLIEFRAIDRHLKPEIVQKSPTSALMRCVILMKSGKQSDAAALYDGIIARHRARIAADDLLSISSTVMRVMLAVYGGNK INDQDVQQIEDAIRRPERVFEHFEGFILTFKCLAAHQAGKLRDAIQFAHEALDVFHVSGSLYGEVYIHIHLAMIHSFMRQ TDESVGEFRQASDLIRRDLSFEGGIKYLNDVIAIEARHEHAPYDQKDMPRLKNLVARLLRAEGWIDIYSGAFRTLSEQIY LAGSLDDALHVLSLALDFSRRNRITSLTRICEAQREILSLISSAPRQSGGGAVAHDAYDPIPALATSPWRVVEAECERHL HLARSGEVTPNLERVTAFRDDQLAEGNLRVATRISALLALVSSGRDLERSLGILEEALDDNRFGRATLFVEDILRAQIAG AGLAARFPQLFARLSARPRPAAGEAPGGRRESIVTQKEWAVLRELHKGQTDKQIALTIGVTEHAIRYHLKNIYAKLNART RQEAVQRAAALGLLTLS >Mature_897_residues MRTLSCMSSSEPDIAPWLLRSKVTPPRQLLSLIRRPDLIQRLETGAEGSLIMLEAPGGYGKSCLLSEWKDQSARQGAKVC WLAIDEDDDVETFIAYLAYSAHIAGIDTAGSGLLNFELSSDGNPSQAIWQFLARIERSGHPVHIVLDDFERLSPAVSRLV IPTLLRRLPENATLVIASRGAVDISTVDFDHRGLVTRLGPADLSFGLQEMTRLWKGRLTPRQIERLSEWTEGWPVLIRLL LTASDMGTFDIRHIDEPGYRDMAIPAYFEEKILSRIDWDLMVFLREASVFEEIPFDAIQEVLDQDDPDFWRRLESLEAFL VPLSGERSGYRLHPMMREYLRQTLSEQQPGRYGALQVRAANWYSDRGNHVRAVKHALAAGDETLLIEILEQTGGIRLWLQ EGLIEFRAIDRHLKPEIVQKSPTSALMRCVILMKSGKQSDAAALYDGIIARHRARIAADDLLSISSTVMRVMLAVYGGNK INDQDVQQIEDAIRRPERVFEHFEGFILTFKCLAAHQAGKLRDAIQFAHEALDVFHVSGSLYGEVYIHIHLAMIHSFMRQ TDESVGEFRQASDLIRRDLSFEGGIKYLNDVIAIEARHEHAPYDQKDMPRLKNLVARLLRAEGWIDIYSGAFRTLSEQIY LAGSLDDALHVLSLALDFSRRNRITSLTRICEAQREILSLISSAPRQSGGGAVAHDAYDPIPALATSPWRVVEAECERHL HLARSGEVTPNLERVTAFRDDQLAEGNLRVATRISALLALVSSGRDLERSLGILEEALDDNRFGRATLFVEDILRAQIAG AGLAARFPQLFARLSARPRPAAGEAPGGRRESIVTQKEWAVLRELHKGQTDKQIALTIGVTEHAIRYHLKNIYAKLNART RQEAVQRAAALGLLTLS
Specific function: Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box):5'-GGA[TG]GA-3' [H]
COG id: COG2909
COG function: function code K; ATP-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI2367223, Length=392, Percent_Identity=24.234693877551, Blast_Score=102, Evalue=9e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016032 - InterPro: IPR011990 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE [H]
EC number: NA
Molecular weight: Translated: 100654; Mature: 100654
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: PS50043 HTH_LUXR_2 ; PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLSCMSSSEPDIAPWLLRSKVTPPRQLLSLIRRPDLIQRLETGAEGSLIMLEAPGGYG CCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCC KSCLLSEWKDQSARQGAKVCWLAIDEDDDVETFIAYLAYSAHIAGIDTAGSGLLNFELSS CHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC DGNPSQAIWQFLARIERSGHPVHIVLDDFERLSPAVSRLVIPTLLRRLPENATLVIASRG CCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC AVDISTVDFDHRGLVTRLGPADLSFGLQEMTRLWKGRLTPRQIERLSEWTEGWPVLIRLL CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHH LTASDMGTFDIRHIDEPGYRDMAIPAYFEEKILSRIDWDLMVFLREASVFEEIPFDAIQE HHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHH VLDQDDPDFWRRLESLEAFLVPLSGERSGYRLHPMMREYLRQTLSEQQPGRYGALQVRAA HHCCCCHHHHHHHHHHHHEEEECCCCCCCEEECHHHHHHHHHHHHHCCCCCCCEEEEEEC NWYSDRGNHVRAVKHALAAGDETLLIEILEQTGGIRLWLQEGLIEFRAIDRHLKPEIVQK CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCHHHCC SPTSALMRCVILMKSGKQSDAAALYDGIIARHRARIAADDLLSISSTVMRVMLAVYGGNK CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC INDQDVQQIEDAIRRPERVFEHFEGFILTFKCLAAHQAGKLRDAIQFAHEALDVFHVSGS CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC LYGEVYIHIHLAMIHSFMRQTDESVGEFRQASDLIRRDLSFEGGIKYLNDVIAIEARHEH CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCC APYDQKDMPRLKNLVARLLRAEGWIDIYSGAFRTLSEQIYLAGSLDDALHVLSLALDFSR CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHH RNRITSLTRICEAQREILSLISSAPRQSGGGAVAHDAYDPIPALATSPWRVVEAECERHL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH HLARSGEVTPNLERVTAFRDDQLAEGNLRVATRISALLALVSSGRDLERSLGILEEALDD HHHCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC NRFGRATLFVEDILRAQIAGAGLAARFPQLFARLSARPRPAAGEAPGGRRESIVTQKEWA CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH VLRELHKGQTDKQIALTIGVTEHAIRYHLKNIYAKLNARTRQEAVQRAAALGLLTLS HHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECC >Mature Secondary Structure MRTLSCMSSSEPDIAPWLLRSKVTPPRQLLSLIRRPDLIQRLETGAEGSLIMLEAPGGYG CCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCC KSCLLSEWKDQSARQGAKVCWLAIDEDDDVETFIAYLAYSAHIAGIDTAGSGLLNFELSS CHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC DGNPSQAIWQFLARIERSGHPVHIVLDDFERLSPAVSRLVIPTLLRRLPENATLVIASRG CCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC AVDISTVDFDHRGLVTRLGPADLSFGLQEMTRLWKGRLTPRQIERLSEWTEGWPVLIRLL CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHH LTASDMGTFDIRHIDEPGYRDMAIPAYFEEKILSRIDWDLMVFLREASVFEEIPFDAIQE HHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHH VLDQDDPDFWRRLESLEAFLVPLSGERSGYRLHPMMREYLRQTLSEQQPGRYGALQVRAA HHCCCCHHHHHHHHHHHHEEEECCCCCCCEEECHHHHHHHHHHHHHCCCCCCCEEEEEEC NWYSDRGNHVRAVKHALAAGDETLLIEILEQTGGIRLWLQEGLIEFRAIDRHLKPEIVQK CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCHHHCC SPTSALMRCVILMKSGKQSDAAALYDGIIARHRARIAADDLLSISSTVMRVMLAVYGGNK CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC INDQDVQQIEDAIRRPERVFEHFEGFILTFKCLAAHQAGKLRDAIQFAHEALDVFHVSGS CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC LYGEVYIHIHLAMIHSFMRQTDESVGEFRQASDLIRRDLSFEGGIKYLNDVIAIEARHEH CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCC APYDQKDMPRLKNLVARLLRAEGWIDIYSGAFRTLSEQIYLAGSLDDALHVLSLALDFSR CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHH RNRITSLTRICEAQREILSLISSAPRQSGGGAVAHDAYDPIPALATSPWRVVEAECERHL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH HLARSGEVTPNLERVTAFRDDQLAEGNLRVATRISALLALVSSGRDLERSLGILEEALDD HHHCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC NRFGRATLFVEDILRAQIAGAGLAARFPQLFARLSARPRPAAGEAPGGRRESIVTQKEWA CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH VLRELHKGQTDKQIALTIGVTEHAIRYHLKNIYAKLNARTRQEAVQRAAALGLLTLS HHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA