| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799405
Identifier: 114799405
GI number: 114799405
Start: 1829709
End: 1830485
Strand: Direct
Name: 114799405
Synonym: HNE_1785
Alternate gene names: NA
Gene position: 1829709-1830485 (Clockwise)
Preceding gene: 114800386
Following gene: 114799671
Centisome position: 49.38
GC content: 56.5
Gene sequence:
>777_bases ATGCCGGTCGTCACTTTCGTCACGGCGCCCGCGGCTGCGTTGACTGTAATTCTTGCGTTGTTCGGTCACGCCGAATTTGG CCTCAAGCTATTAGGGCAGTCGCTCGAACTCGTCCTGACGATGACCCATTATTTTTATAATCTCTCTCCTGGCGTGGTGC GAATGCCTGTGCCCATGCCGCCAATGGCACTGGTCTTCCTATCCCTCTCACTGGGCGCAATGATGGCTTTTGCTGGCTGG GCGCGCCTGATTGGCGGCGCCCTGTTGCTTGCACCCGCAATATGGTTGTGGGGCCACGCACCCAAAGTCGTGATGCATTG GTCAGTATCCGGAGATGTCTATATTGCGAACCCCGATGGCATGGTGGAGCGCCTGTCACTCACCGATGGCGATGGAATGG CGCCCTTGAGATTTTCTGAAGTTTCCGACGCGACCGCATGCGACGACGAAGTTTGCGTTTATCCGTCCTTCTCTGGCTTG CGAGTTCGCACAAATGGACAGCCAGACAAGTCGAAGGAAGACACAGAGCAGGCCACGAGCCAGTTGACTGTGGCCATAGA GGCATCAGCGCAGGCAGATAGCGATCTGGCCTTCAGTTGGACCGATGTGAGGGAGGCCGGAGGAATCACCGTGTATGCCA AGGACGGACACCTAAACATCGTCCGCATACAAAACTGCACCGAACGCCGTTGGCGCCGGTGCAGCAGTGATGACATTCTT GCCCCGAGAAGCGGCGCTATCGCGTATTTTGACCGCGTTATTCGTAACGGCGAATAA
Upstream 100 bases:
>100_bases AAGATCAAGGTTCATTCGATTGCCGGGTTTGGAGCTGAGCAGCAGCCCAAGTTGATCCGGGTTACCCATCGCGCGCGCCT GGATTGCCAATTTCGCAATC
Downstream 100 bases:
>100_bases GCGCGACCAGCCGGCCCTGAACTTCAACCCTGTCAGGCCCGAAGATGCGCGTTTCGAATGCCGGGTTTGCTGCTTCCAGG GCAACAGATGCGCCTTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MPVVTFVTAPAAALTVILALFGHAEFGLKLLGQSLELVLTMTHYFYNLSPGVVRMPVPMPPMALVFLSLSLGAMMAFAGW ARLIGGALLLAPAIWLWGHAPKVVMHWSVSGDVYIANPDGMVERLSLTDGDGMAPLRFSEVSDATACDDEVCVYPSFSGL RVRTNGQPDKSKEDTEQATSQLTVAIEASAQADSDLAFSWTDVREAGGITVYAKDGHLNIVRIQNCTERRWRRCSSDDIL APRSGAIAYFDRVIRNGE
Sequences:
>Translated_258_residues MPVVTFVTAPAAALTVILALFGHAEFGLKLLGQSLELVLTMTHYFYNLSPGVVRMPVPMPPMALVFLSLSLGAMMAFAGW ARLIGGALLLAPAIWLWGHAPKVVMHWSVSGDVYIANPDGMVERLSLTDGDGMAPLRFSEVSDATACDDEVCVYPSFSGL RVRTNGQPDKSKEDTEQATSQLTVAIEASAQADSDLAFSWTDVREAGGITVYAKDGHLNIVRIQNCTERRWRRCSSDDIL APRSGAIAYFDRVIRNGE >Mature_257_residues PVVTFVTAPAAALTVILALFGHAEFGLKLLGQSLELVLTMTHYFYNLSPGVVRMPVPMPPMALVFLSLSLGAMMAFAGWA RLIGGALLLAPAIWLWGHAPKVVMHWSVSGDVYIANPDGMVERLSLTDGDGMAPLRFSEVSDATACDDEVCVYPSFSGLR VRTNGQPDKSKEDTEQATSQLTVAIEASAQADSDLAFSWTDVREAGGITVYAKDGHLNIVRIQNCTERRWRRCSSDDILA PRSGAIAYFDRVIRNGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27978; Mature: 27847
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00082 EXTRADIOL_DIOXYGENAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVVTFVTAPAAALTVILALFGHAEFGLKLLGQSLELVLTMTHYFYNLSPGVVRMPVPMP CCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCCCC PMALVFLSLSLGAMMAFAGWARLIGGALLLAPAIWLWGHAPKVVMHWSVSGDVYIANPDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCC MVERLSLTDGDGMAPLRFSEVSDATACDDEVCVYPSFSGLRVRTNGQPDKSKEDTEQATS CEEEEEECCCCCCCCEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHH QLTVAIEASAQADSDLAFSWTDVREAGGITVYAKDGHLNIVRIQNCTERRWRRCSSDDIL EEEEEEEECCCCCCCCEEEEHHHHHCCCEEEEEECCCEEEEEECCHHHHHHHCCCCCCCC APRSGAIAYFDRVIRNGE CCCCCHHHHHHHHHHCCC >Mature Secondary Structure PVVTFVTAPAAALTVILALFGHAEFGLKLLGQSLELVLTMTHYFYNLSPGVVRMPVPMP CEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCCCC PMALVFLSLSLGAMMAFAGWARLIGGALLLAPAIWLWGHAPKVVMHWSVSGDVYIANPDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCC MVERLSLTDGDGMAPLRFSEVSDATACDDEVCVYPSFSGLRVRTNGQPDKSKEDTEQATS CEEEEEECCCCCCCCEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHH QLTVAIEASAQADSDLAFSWTDVREAGGITVYAKDGHLNIVRIQNCTERRWRRCSSDDIL EEEEEEEECCCCCCCCEEEEHHHHHCCCEEEEEECCCEEEEEECCHHHHHHHCCCCCCCC APRSGAIAYFDRVIRNGE CCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA