| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799365
Identifier: 114799365
GI number: 114799365
Start: 1163052
End: 1164269
Strand: Direct
Name: 114799365
Synonym: HNE_1152
Alternate gene names: NA
Gene position: 1163052-1164269 (Clockwise)
Preceding gene: 114798599
Following gene: 114799052
Centisome position: 31.39
GC content: 64.45
Gene sequence:
>1218_bases GTGAGCCAGAGAGCGGTTGCAACCCAGTCGCCAGATGGGGAGCGCGCGGCGCCGGTTCTGCCCGCGCTGGCGGCGTTGGC GCGGCCCGGCGCACTTGAGGCACTGGCGCCCCATTGCGGAGAGCTGGCCGATGCAAGCGCCCTGACGCCGCCGGAAACGG TGCTGCGCCATGGCGGCGGGCTTATTCTGATTGAGCAGGGCGTGCCAGGCTGGGACCAGCTGTTGCTGTTGCTGGCCGTG GAGCGCCCGTCCAGCGTGGTTGTGGTGGTGTCTGATCATCTGCCGGCGCATATGGTACGGGCACTGATGAAAATAGAAGC GTCGGATATTCTGCCGGCCTCGGCGAGCGCGAGCGATATTGCATCGGCGTTCGAGCGGCTGTGCCAGACGCGGGTATCGG AACGAGAAAAGGATACGCCGCGCGCATCGGTCTGCTGGGCGTTTCGCGGGGCAGTCGGCGGAGCGGGCGTTTCGACGCTG GCGATTGAAAGCGCGTTTGCGCTGGCCAGGATTGTCGGACCGGGCAAGGTGTGCCTGGTGGATTTGAACCTGGCCGACGG GATGACCGCGTCTTTTCTGGAGGCGGTGCCCAAGCTGGACCTCAAGGCATTGTCGGCGGCGCCGGAGCGGCTGGATGAGC GGCTGCTGGCGGCGTGGTGCTGGCAGCATGAGGACGGGGTGTCGATCATCACGTCGCCGCGTAATCCTGATGCGGATGCG ATGGCGACGGAGGCGGCGATCCTGCGGCTGCTGGACGTGACCTGCGCGACCTTTGAATATGTGCTGCTGGACATGCCGCG CCACATGATGCCGTGGACAAAGCCCGTGATGGCGGCTGTGGATCAGGCAATTGTGGTCAGTGAGCTGACGGTGCCGAGCC TGCATGCAGCGGCGGATATGTGCCGGGACATCGACATCTTGCGGGCAGGCGGATCGAAGGCGCGGCTTGTGCTGAACCGG ATGTTCCCCAAGAAGCAGTTTCGCGCGGGGTTTCCGGTCGACAAGGCCGAGAAGTCTATTGAGCGCACGATCGATGTGAC CATCACATCGGACTGGGACGCAGCCCGCACAGCGGTCAATCTCGGCAAGCCCATCGCTGACGTGAAACCCAAGAGCCTGC TGGTGGCAGATGTTGCCGGGCTGGTGCGCAAGTTTGCGCCGGAAGAAACGCTTGCCGCCTTTGAGGCGAGCCATAAAGCG AAGCGAGCGAAACGATGA
Upstream 100 bases:
>100_bases TGGCAGCGAGTTCGGGCGTGCGCGCGGCAAAGGCCGTGCAGGCACTCAATGATGGCAAGACGAAGACGCTGGCGGACGCC GGTGGCACGGGAGGCGGGGA
Downstream 100 bases:
>100_bases GCCGGTTTGGATTTACCAATGCGGCGCCGAAGGTGGCCGAGGCTGTTCCGGCGCCGGTCGCTCCGCAAGCAGCGCCTGCG GTGTCTCCCAAACAGACGCA
Product: putative pilus assembly protein CpaE
Products: NA
Alternate protein names: Pilus Assembly Protein; Pilus Assembly Protein CpaE; Flp Pilus Assembly Protein ATPase CpaE; Septum Site-Determining Protein; Chromosome Partitioning ATPase; Flp Pilus Assembly Protein ATPase CpaE-Like Protein; Flp Pilus Assembly Response Receiver ATPase CpaE; Flp Pilus Assembly Protein ATPase CpaE-Like; Flp Pilus Assembly Protein ATPase; Response Regulator; Pilus Assembly ATPase CpaE; Flp Pilus Assembly Protein; Response Regulator Receiver; ATPase
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MSQRAVATQSPDGERAAPVLPALAALARPGALEALAPHCGELADASALTPPETVLRHGGGLILIEQGVPGWDQLLLLLAV ERPSSVVVVVSDHLPAHMVRALMKIEASDILPASASASDIASAFERLCQTRVSEREKDTPRASVCWAFRGAVGGAGVSTL AIESAFALARIVGPGKVCLVDLNLADGMTASFLEAVPKLDLKALSAAPERLDERLLAAWCWQHEDGVSIITSPRNPDADA MATEAAILRLLDVTCATFEYVLLDMPRHMMPWTKPVMAAVDQAIVVSELTVPSLHAAADMCRDIDILRAGGSKARLVLNR MFPKKQFRAGFPVDKAEKSIERTIDVTITSDWDAARTAVNLGKPIADVKPKSLLVADVAGLVRKFAPEETLAAFEASHKA KRAKR
Sequences:
>Translated_405_residues MSQRAVATQSPDGERAAPVLPALAALARPGALEALAPHCGELADASALTPPETVLRHGGGLILIEQGVPGWDQLLLLLAV ERPSSVVVVVSDHLPAHMVRALMKIEASDILPASASASDIASAFERLCQTRVSEREKDTPRASVCWAFRGAVGGAGVSTL AIESAFALARIVGPGKVCLVDLNLADGMTASFLEAVPKLDLKALSAAPERLDERLLAAWCWQHEDGVSIITSPRNPDADA MATEAAILRLLDVTCATFEYVLLDMPRHMMPWTKPVMAAVDQAIVVSELTVPSLHAAADMCRDIDILRAGGSKARLVLNR MFPKKQFRAGFPVDKAEKSIERTIDVTITSDWDAARTAVNLGKPIADVKPKSLLVADVAGLVRKFAPEETLAAFEASHKA KRAKR >Mature_404_residues SQRAVATQSPDGERAAPVLPALAALARPGALEALAPHCGELADASALTPPETVLRHGGGLILIEQGVPGWDQLLLLLAVE RPSSVVVVVSDHLPAHMVRALMKIEASDILPASASASDIASAFERLCQTRVSEREKDTPRASVCWAFRGAVGGAGVSTLA IESAFALARIVGPGKVCLVDLNLADGMTASFLEAVPKLDLKALSAAPERLDERLLAAWCWQHEDGVSIITSPRNPDADAM ATEAAILRLLDVTCATFEYVLLDMPRHMMPWTKPVMAAVDQAIVVSELTVPSLHAAADMCRDIDILRAGGSKARLVLNRM FPKKQFRAGFPVDKAEKSIERTIDVTITSDWDAARTAVNLGKPIADVKPKSLLVADVAGLVRKFAPEETLAAFEASHKAK RAKR
Specific function: Unknown
COG id: COG4963
COG function: function code U; Flp pilus assembly protein, ATPase CpaE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43168; Mature: 43037
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRAVATQSPDGERAAPVLPALAALARPGALEALAPHCGELADASALTPPETVLRHGGG CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCC LILIEQGVPGWDQLLLLLAVERPSSVVVVVSDHLPAHMVRALMKIEASDILPASASASDI EEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHH ASAFERLCQTRVSEREKDTPRASVCWAFRGAVGGAGVSTLAIESAFALARIVGPGKVCLV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE DLNLADGMTASFLEAVPKLDLKALSAAPERLDERLLAAWCWQHEDGVSIITSPRNPDADA EEECCCCCHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHH MATEAAILRLLDVTCATFEYVLLDMPRHMMPWTKPVMAAVDQAIVVSELTVPSLHAAADM HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH CRDIDILRAGGSKARLVLNRMFPKKQFRAGFPVDKAEKSIERTIDVTITSDWDAARTAVN HHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHEEEEEEECCCHHHHHHHH LGKPIADVKPKSLLVADVAGLVRKFAPEETLAAFEASHKAKRAKR CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQRAVATQSPDGERAAPVLPALAALARPGALEALAPHCGELADASALTPPETVLRHGGG CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCC LILIEQGVPGWDQLLLLLAVERPSSVVVVVSDHLPAHMVRALMKIEASDILPASASASDI EEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHH ASAFERLCQTRVSEREKDTPRASVCWAFRGAVGGAGVSTLAIESAFALARIVGPGKVCLV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE DLNLADGMTASFLEAVPKLDLKALSAAPERLDERLLAAWCWQHEDGVSIITSPRNPDADA EEECCCCCHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHH MATEAAILRLLDVTCATFEYVLLDMPRHMMPWTKPVMAAVDQAIVVSELTVPSLHAAADM HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH CRDIDILRAGGSKARLVLNRMFPKKQFRAGFPVDKAEKSIERTIDVTITSDWDAARTAVN HHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHEEEEEEECCCHHHHHHHH LGKPIADVKPKSLLVADVAGLVRKFAPEETLAAFEASHKAKRAKR CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA