| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is bktB [H]
Identifier: 114799237
GI number: 114799237
Start: 973446
End: 974657
Strand: Direct
Name: bktB [H]
Synonym: HNE_0959
Alternate gene names: 114799237
Gene position: 973446-974657 (Clockwise)
Preceding gene: 114798582
Following gene: 114797581
Centisome position: 26.27
GC content: 65.1
Gene sequence:
>1212_bases ATGCGCGACGTTGTGATTGTGGAGCCGGTGCGGACGGCGGTGGGTGGCTTTGGCGGCGCGTTCAAGGGCGTGCACGCGCA TGAGCTGGGCGCGGCGGTGGTCGAAGGGCTGATGGCGCGCACGGGCCTGGCGAAAGACAAGGTCGATGATGTGATCTTCG CCCAGTGCTACCCTTCGATGGACGCGCCCGCGCTGGGCCGGGTTGTGGCGCTCGATGCCGGGCTCCCGGTAGAAGTCACC GGCATGCAGATCGACCGGCGCTGCGGCTCTGGCCTTCAGGCGATCATTAACGCCACGATGCAGGTGGCCACCGGCGCGAT GGACTGCGTGATCGCCGGCGGCGCCGAGTCGATGAGCAATGCGCCGTTCTATTCCACCAACTGGCGCTGGGGTCTCGGTC AGGGCAACATGACGGTGCATGATGGCCTCGTGAATGGCCGTCTGACAGCGGGTGGCAAGAACTTCCCCGTACCCGGCGGC ATGCTGGAGACGGCCGAAAACCTTCGCCGCGATTACCAGATCACCCGCCAGGCGCAGGACGAATTCGCCGCCGCTTCTCA TGCCAAGGCGGTTGCCGCGCAGAACTCCGGCGTGTTCGATGAGGAAATCATTCCGTTCACGGTCAAGGGCCGCAAGGGCG ATACCGTAGTGACGAAGGACGAACACCCCCGTCCGGACTCAACCCTTGAAGTGCTCTCCAAACTGAAACCCATCCGCCAG AAACAGGACGCTGAAGCCACCGTCACCGCCGGCAATGCCAGCGGCCAGAATGATGGCGGCTCGGCTTGTCTCGTGATGAC GCGCGAAATGGCAGAGGCCAATGGCCTCAAGCCGCTCGCCCGGCTGGTCTCCTGGTCGGTGGCCGGGGTTGGCCCGGCGG TGATGGGCATCGGCCCTGTTCCGTCCACGGAAAAGGCGCTGGCGCGCGCGGGCCTGACGCTGAAAGACATTGACCTGATC GAACTCAACGAAGCGTTTGCCGCGCAGGTGCTTGCCTGCACCAAGGCGATGGGCTTCGCCAAGGAAGACTATGCGCGCCT CAATGTGCACGGATCGGGCATTTCACTGGGCCATCCGGTCGGCGCGACCGGCGGGCGTATTCTGGCCACGCTGCTGCGTG AAATGGACCGCCGCGAGGCGCGGTACGGCGTTGAAACCATGTGCATTGGCGGCGGGCAGGGCCTGGCTGCGGTGTTCGAG CGCGTTAACTGA
Upstream 100 bases:
>100_bases GACAGTTATGCTGAGCTTGCATGAAAGGCCCCGGGTTGCGCTGAGCCGCAGGCCGGGCTTAACAGGGGCGAAGTTTTGAA GAGTTCCCGGGAGAAATTGA
Downstream 100 bases:
>100_bases CATCTGCTCAGGCTCCGGCGATCCCGGAGCCTGACAGTAAATTAAACTTGCATTCGGCCTGTGGATAGCGCATATGGCTC GCATCGACATTGGCCGGACG
Product: acetyl-CoA acetyltransferase
Products: NA
Alternate protein names: Acetoacetyl-CoA thiolase [H]
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MRDVVIVEPVRTAVGGFGGAFKGVHAHELGAAVVEGLMARTGLAKDKVDDVIFAQCYPSMDAPALGRVVALDAGLPVEVT GMQIDRRCGSGLQAIINATMQVATGAMDCVIAGGAESMSNAPFYSTNWRWGLGQGNMTVHDGLVNGRLTAGGKNFPVPGG MLETAENLRRDYQITRQAQDEFAAASHAKAVAAQNSGVFDEEIIPFTVKGRKGDTVVTKDEHPRPDSTLEVLSKLKPIRQ KQDAEATVTAGNASGQNDGGSACLVMTREMAEANGLKPLARLVSWSVAGVGPAVMGIGPVPSTEKALARAGLTLKDIDLI ELNEAFAAQVLACTKAMGFAKEDYARLNVHGSGISLGHPVGATGGRILATLLREMDRREARYGVETMCIGGGQGLAAVFE RVN
Sequences:
>Translated_403_residues MRDVVIVEPVRTAVGGFGGAFKGVHAHELGAAVVEGLMARTGLAKDKVDDVIFAQCYPSMDAPALGRVVALDAGLPVEVT GMQIDRRCGSGLQAIINATMQVATGAMDCVIAGGAESMSNAPFYSTNWRWGLGQGNMTVHDGLVNGRLTAGGKNFPVPGG MLETAENLRRDYQITRQAQDEFAAASHAKAVAAQNSGVFDEEIIPFTVKGRKGDTVVTKDEHPRPDSTLEVLSKLKPIRQ KQDAEATVTAGNASGQNDGGSACLVMTREMAEANGLKPLARLVSWSVAGVGPAVMGIGPVPSTEKALARAGLTLKDIDLI ELNEAFAAQVLACTKAMGFAKEDYARLNVHGSGISLGHPVGATGGRILATLLREMDRREARYGVETMCIGGGQGLAAVFE RVN >Mature_403_residues MRDVVIVEPVRTAVGGFGGAFKGVHAHELGAAVVEGLMARTGLAKDKVDDVIFAQCYPSMDAPALGRVVALDAGLPVEVT GMQIDRRCGSGLQAIINATMQVATGAMDCVIAGGAESMSNAPFYSTNWRWGLGQGNMTVHDGLVNGRLTAGGKNFPVPGG MLETAENLRRDYQITRQAQDEFAAASHAKAVAAQNSGVFDEEIIPFTVKGRKGDTVVTKDEHPRPDSTLEVLSKLKPIRQ KQDAEATVTAGNASGQNDGGSACLVMTREMAEANGLKPLARLVSWSVAGVGPAVMGIGPVPSTEKALARAGLTLKDIDLI ELNEAFAAQVLACTKAMGFAKEDYARLNVHGSGISLGHPVGATGGRILATLLREMDRREARYGVETMCIGGGQGLAAVFE RVN
Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiolase family [H]
Homologues:
Organism=Homo sapiens, GI167614485, Length=402, Percent_Identity=39.3034825870647, Blast_Score=288, Evalue=7e-78, Organism=Homo sapiens, GI148539872, Length=398, Percent_Identity=40.7035175879397, Blast_Score=284, Evalue=1e-76, Organism=Homo sapiens, GI4501853, Length=407, Percent_Identity=38.3292383292383, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI4557237, Length=408, Percent_Identity=33.0882352941176, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI4504327, Length=427, Percent_Identity=34.4262295081967, Blast_Score=199, Evalue=3e-51, Organism=Homo sapiens, GI194353979, Length=92, Percent_Identity=50, Blast_Score=91, Evalue=2e-18, Organism=Escherichia coli, GI1788554, Length=404, Percent_Identity=44.3069306930693, Blast_Score=306, Evalue=1e-84, Organism=Escherichia coli, GI87082165, Length=401, Percent_Identity=44.6384039900249, Blast_Score=301, Evalue=5e-83, Organism=Escherichia coli, GI1787663, Length=410, Percent_Identity=41.7073170731707, Blast_Score=283, Evalue=1e-77, Organism=Escherichia coli, GI48994986, Length=409, Percent_Identity=39.6088019559902, Blast_Score=262, Evalue=3e-71, Organism=Escherichia coli, GI1788683, Length=413, Percent_Identity=32.2033898305085, Blast_Score=179, Evalue=3e-46, Organism=Caenorhabditis elegans, GI133906874, Length=400, Percent_Identity=41.25, Blast_Score=298, Evalue=3e-81, Organism=Caenorhabditis elegans, GI17535921, Length=401, Percent_Identity=33.6658354114713, Blast_Score=211, Evalue=4e-55, Organism=Caenorhabditis elegans, GI25147385, Length=401, Percent_Identity=33.1670822942643, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17551802, Length=430, Percent_Identity=33.7209302325581, Blast_Score=188, Evalue=5e-48, Organism=Caenorhabditis elegans, GI17535917, Length=413, Percent_Identity=24.6973365617433, Blast_Score=125, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6325229, Length=406, Percent_Identity=35.9605911330049, Blast_Score=229, Evalue=6e-61, Organism=Saccharomyces cerevisiae, GI6322031, Length=402, Percent_Identity=36.0696517412935, Blast_Score=219, Evalue=8e-58, Organism=Drosophila melanogaster, GI17648125, Length=406, Percent_Identity=42.6108374384236, Blast_Score=296, Evalue=2e-80, Organism=Drosophila melanogaster, GI24655093, Length=403, Percent_Identity=39.9503722084367, Blast_Score=289, Evalue=2e-78, Organism=Drosophila melanogaster, GI24640423, Length=401, Percent_Identity=35.1620947630923, Blast_Score=225, Evalue=5e-59, Organism=Drosophila melanogaster, GI17137578, Length=427, Percent_Identity=32.7868852459016, Blast_Score=188, Evalue=6e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020615 - InterPro: IPR020617 - InterPro: IPR020613 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: =2.3.1.9 [H]
Molecular weight: Translated: 42185; Mature: 42185
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDVVIVEPVRTAVGGFGGAFKGVHAHELGAAVVEGLMARTGLAKDKVDDVIFAQCYPSM CCCEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC DAPALGRVVALDAGLPVEVTGMQIDRRCGSGLQAIINATMQVATGAMDCVIAGGAESMSN CCCCCCEEEEECCCCCEEEECCCHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCHHHCCC APFYSTNWRWGLGQGNMTVHDGLVNGRLTAGGKNFPVPGGMLETAENLRRDYQITRQAQD CCEEECCCEEECCCCCEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH EFAAASHAKAVAAQNSGVFDEEIIPFTVKGRKGDTVVTKDEHPRPDSTLEVLSKLKPIRQ HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHH KQDAEATVTAGNASGQNDGGSACLVMTREMAEANGLKPLARLVSWSVAGVGPAVMGIGPV HCCCCEEEEECCCCCCCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHCCCCCHHEECCCC PSTEKALARAGLTLKDIDLIELNEAFAAQVLACTKAMGFAKEDYARLNVHGSGISLGHPV CCHHHHHHHCCCEEECCCEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEECCCCC GATGGRILATLLREMDRREARYGVETMCIGGGQGLAAVFERVN CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCC >Mature Secondary Structure MRDVVIVEPVRTAVGGFGGAFKGVHAHELGAAVVEGLMARTGLAKDKVDDVIFAQCYPSM CCCEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC DAPALGRVVALDAGLPVEVTGMQIDRRCGSGLQAIINATMQVATGAMDCVIAGGAESMSN CCCCCCEEEEECCCCCEEEECCCHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCHHHCCC APFYSTNWRWGLGQGNMTVHDGLVNGRLTAGGKNFPVPGGMLETAENLRRDYQITRQAQD CCEEECCCEEECCCCCEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH EFAAASHAKAVAAQNSGVFDEEIIPFTVKGRKGDTVVTKDEHPRPDSTLEVLSKLKPIRQ HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHH KQDAEATVTAGNASGQNDGGSACLVMTREMAEANGLKPLARLVSWSVAGVGPAVMGIGPV HCCCCEEEEECCCCCCCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHCCCCCHHEECCCC PSTEKALARAGLTLKDIDLIELNEAFAAQVLACTKAMGFAKEDYARLNVHGSGISLGHPV CCHHHHHHHCCCEEECCCEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEECCCCC GATGGRILATLLREMDRREARYGVETMCIGGGQGLAAVFERVN CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA