| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799222
Identifier: 114799222
GI number: 114799222
Start: 1924314
End: 1925210
Strand: Direct
Name: 114799222
Synonym: HNE_1861
Alternate gene names: NA
Gene position: 1924314-1925210 (Clockwise)
Preceding gene: 114797386
Following gene: 114799982
Centisome position: 51.94
GC content: 55.63
Gene sequence:
>897_bases TTGATCGTCACATCCCTGCACTATTCAGGTCACAAGGATGGTGCCGCAATGATGAAGACAACAGTGAGCGAGGAATGGCT AACCTACACTTGGGTTCGCCTGCGGTCAGGCGTGGAACCTCATGAGGTAAAGCGCCAGCTGATACAAAACGGATTTGATG ACCAGGCGATCCGTTCACTCATGCGGGACGCATATAATGGCCGCCGCCCGATTTCAGATGTCGATCACGCAGCGCTGGCC AGGGCGCCCCTCACGCTTCGGGCAAAGTCGCACCCCCAGCTCCGCCGCATCCCCGCCCCAAAGGCCCAACTTTATGTCTG GCCAAATTTCCTGGCCCCGGAAACCTGCGACGCCTTGATCGCTCTCACGGATGAGCGCCTGCGGGCGTCCACAACTACCG ACGCTTTTGCAGACCCGAAGATCCGCACATCCCGCTCCTCAGACATCGGCACGATGGGGCATAATCTGGTCATGCAACTC GACGAACTGATCGCTGAAGCACTTGGCATTCACTGGTCCTATTCAGATGCCACACAGACACAGCGTTATGACGTCAACCA GGAATACAAAGCCCACTACGACTACTTCACCCCCGGCACGCGGGATTATCAGGTTCATTGCCAGTTCACCGGCCAGCGCA CCTGGACCTTCATGATCTACCTGAATGATGTCGAGGAAGGCGGCGGCACGCGTTTCCGGCGGCTAGAGAAAACGATCATG CCTGAAAAGGGAAAGGCCGTAATCTGGAACAATCTGAACCCGGACGGCAGCGTAAATCCGTATACGATCCATCATGGCAT GAAAGTTCGATCCGGCGCTAAATATGTGATCACGAAATGGTTCCGCGAACGTGGCTGGGGAGAGATGTTTCCTGAGGACT ACTCCAGAATTTCGTAA
Upstream 100 bases:
>100_bases TACAGTTTTGCGTCAAGGACATCCACGTATTTGTATATTCCGTGTAGGACCAGTTTTATTCCGTGCACGTCTTTGCTTCC CGCTTTGATTCCGGCGTCAT
Downstream 100 bases:
>100_bases TGTTGCCAAGGGGTCACACACGCACCGGCGAACGCTGGCTTCACATAAGCGTCATCTAAACTTCCCGTAAGTGTTGCAAT CAAATCTTAAGGGTTCGCGC
Product: 2OG-Fe(II) oxygenase family oxidoreductase
Products: NA
Alternate protein names: 2OG-Fe(II) Oxygenase; Prolyl 4-Hydroxylase Alpha Subunit; Oxidoreductase 2OG-Fe(II) Oxygenase Family; Oxygenase; Procollagen-Proline 2-Oxoglutarate-4-Dioxygenase; Response Regulator Receiver Domain-Containing Protein; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Prolyl 4-Hydroxylase Subunit Alpha; 2OG-Fe(II) Oxygenase Superfamily Protein; 2OG-Fe(II) Oxygenase Family Protein; Procollagen-Proline 2-Oxoglutarate-4- Dioxygenase; Prolyl 4-Hydroxylase
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MIVTSLHYSGHKDGAAMMKTTVSEEWLTYTWVRLRSGVEPHEVKRQLIQNGFDDQAIRSLMRDAYNGRRPISDVDHAALA RAPLTLRAKSHPQLRRIPAPKAQLYVWPNFLAPETCDALIALTDERLRASTTTDAFADPKIRTSRSSDIGTMGHNLVMQL DELIAEALGIHWSYSDATQTQRYDVNQEYKAHYDYFTPGTRDYQVHCQFTGQRTWTFMIYLNDVEEGGGTRFRRLEKTIM PEKGKAVIWNNLNPDGSVNPYTIHHGMKVRSGAKYVITKWFRERGWGEMFPEDYSRIS
Sequences:
>Translated_298_residues MIVTSLHYSGHKDGAAMMKTTVSEEWLTYTWVRLRSGVEPHEVKRQLIQNGFDDQAIRSLMRDAYNGRRPISDVDHAALA RAPLTLRAKSHPQLRRIPAPKAQLYVWPNFLAPETCDALIALTDERLRASTTTDAFADPKIRTSRSSDIGTMGHNLVMQL DELIAEALGIHWSYSDATQTQRYDVNQEYKAHYDYFTPGTRDYQVHCQFTGQRTWTFMIYLNDVEEGGGTRFRRLEKTIM PEKGKAVIWNNLNPDGSVNPYTIHHGMKVRSGAKYVITKWFRERGWGEMFPEDYSRIS >Mature_298_residues MIVTSLHYSGHKDGAAMMKTTVSEEWLTYTWVRLRSGVEPHEVKRQLIQNGFDDQAIRSLMRDAYNGRRPISDVDHAALA RAPLTLRAKSHPQLRRIPAPKAQLYVWPNFLAPETCDALIALTDERLRASTTTDAFADPKIRTSRSSDIGTMGHNLVMQL DELIAEALGIHWSYSDATQTQRYDVNQEYKAHYDYFTPGTRDYQVHCQFTGQRTWTFMIYLNDVEEGGGTRFRRLEKTIM PEKGKAVIWNNLNPDGSVNPYTIHHGMKVRSGAKYVITKWFRERGWGEMFPEDYSRIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4758868, Length=144, Percent_Identity=35.4166666666667, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI217272863, Length=144, Percent_Identity=35.4166666666667, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI63252893, Length=144, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI63252891, Length=144, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI217272861, Length=144, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI63252886, Length=144, Percent_Identity=31.25, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI217272849, Length=168, Percent_Identity=29.7619047619048, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI63252888, Length=168, Percent_Identity=29.7619047619048, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI33589818, Length=120, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17552840, Length=266, Percent_Identity=24.4360902255639, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI193209070, Length=175, Percent_Identity=27.4285714285714, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI193209068, Length=165, Percent_Identity=27.8787878787879, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17541712, Length=184, Percent_Identity=23.9130434782609, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI24651477, Length=185, Percent_Identity=28.6486486486486, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI78706702, Length=146, Percent_Identity=36.3013698630137, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI116008434, Length=204, Percent_Identity=27.9411764705882, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI281361323, Length=155, Percent_Identity=34.1935483870968, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI116008537, Length=155, Percent_Identity=29.0322580645161, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI116008130, Length=155, Percent_Identity=29.0322580645161, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI24651418, Length=156, Percent_Identity=31.4102564102564, Blast_Score=81, Evalue=9e-16, Organism=Drosophila melanogaster, GI24651407, Length=156, Percent_Identity=29.4871794871795, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI221460681, Length=206, Percent_Identity=27.1844660194175, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI21358233, Length=208, Percent_Identity=29.3269230769231, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24651430, Length=169, Percent_Identity=28.4023668639053, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI24666354, Length=129, Percent_Identity=30.2325581395349, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI116008432, Length=129, Percent_Identity=30.2325581395349, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI116008128, Length=129, Percent_Identity=30.2325581395349, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24651416, Length=119, Percent_Identity=33.6134453781513, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24651420, Length=179, Percent_Identity=25.1396648044693, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI21358309, Length=119, Percent_Identity=33.6134453781513, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24651424, Length=142, Percent_Identity=27.4647887323944, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI221512818, Length=137, Percent_Identity=25.5474452554745, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI281362877, Length=153, Percent_Identity=27.4509803921569, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34305; Mature: 34305
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVTSLHYSGHKDGAAMMKTTVSEEWLTYTWVRLRSGVEPHEVKRQLIQNGFDDQAIRSL CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHH MRDAYNGRRPISDVDHAALARAPLTLRAKSHPQLRRIPAPKAQLYVWPNFLAPETCDALI HHHHHCCCCCCCHHHHHHHHCCCEEEEECCCCHHHCCCCCCCEEEECCCCCCCHHHHHHE ALTDERLRASTTTDAFADPKIRTSRSSDIGTMGHNLVMQLDELIAEALGIHWSYSDATQT EECHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC QRYDVNQEYKAHYDYFTPGTRDYQVHCQFTGQRTWTFMIYLNDVEEGGGTRFRRLEKTIM HHCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCEEEEEEEEEECCCCCCHHHHHHHHHHC PEKGKAVIWNNLNPDGSVNPYTIHHGMKVRSGAKYVITKWFRERGWGEMFPEDYSRIS CCCCCEEEECCCCCCCCCCCEEEECCEEECCCCHHHHHHHHHHCCCCCCCCHHHHHCC >Mature Secondary Structure MIVTSLHYSGHKDGAAMMKTTVSEEWLTYTWVRLRSGVEPHEVKRQLIQNGFDDQAIRSL CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHH MRDAYNGRRPISDVDHAALARAPLTLRAKSHPQLRRIPAPKAQLYVWPNFLAPETCDALI HHHHHCCCCCCCHHHHHHHHCCCEEEEECCCCHHHCCCCCCCEEEECCCCCCCHHHHHHE ALTDERLRASTTTDAFADPKIRTSRSSDIGTMGHNLVMQLDELIAEALGIHWSYSDATQT EECHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC QRYDVNQEYKAHYDYFTPGTRDYQVHCQFTGQRTWTFMIYLNDVEEGGGTRFRRLEKTIM HHCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCEEEEEEEEEECCCCCCHHHHHHHHHHC PEKGKAVIWNNLNPDGSVNPYTIHHGMKVRSGAKYVITKWFRERGWGEMFPEDYSRIS CCCCCEEEECCCCCCCCCCCEEEECCEEECCCCHHHHHHHHHHCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA