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The map label for this gene is 114797386

Identifier: 114797386

GI number: 114797386

Start: 1922957

End: 1923340

Strand: Direct

Name: 114797386

Synonym: HNE_1859

Alternate gene names: NA

Gene position: 1922957-1923340 (Clockwise)

Preceding gene: 114798184

Following gene: 114799222

Centisome position: 51.9

GC content: 57.81

Gene sequence:

>384_bases
ATGATGCAAGAAGAAATTCGGGCTGCCGGCTCCCGTTCTCCCACAAAGGTTGACCAACAGGTCGGCGAAAAAATCCGCGA
ACTCCGTATAGCCCAAAACTTCACGCTTTCTGAACTCGGTCAGGAGCTGGGTATCAGCCATCAACAGCTCCAGAAATACG
AAACCGGTACCAACCGCCTCAGCGCCGGCATGTTGTCCAGCGTCGCTCGGGCGCTTCGGGTACCTATTGCCGAACTTTTC
CAGACATCGGACGCGACCTCACAGGAAGCAAGGGACCCGGTGAGCGAATCGCGCGCCCGTTGCCACGCCCTGATCGATCG
CACCAGCTCAGTCGGCAAGCTCGAAACGATGGCGAAGGTTTTGCGCGCTCTTTCGGCGGATTGA

Upstream 100 bases:

>100_bases
GCGTTTCAAATATTTGACAAGCGTTTCATAAATTTATGCACCGCATAACTTGCTACAACGCTTGTCAATTAGGAGACATA
ATAAAACCTAAAGGTGGAAA

Downstream 100 bases:

>100_bases
GTCGCCGCCGCAGACAAAAAAGAGCCGGAGCAGCGATGCTCCGGCTCTTTTTATGTTGGCACTAAGGCCGCCTTCAGTTC
ACACGAACATAAGGGCCGCG

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MMQEEIRAAGSRSPTKVDQQVGEKIRELRIAQNFTLSELGQELGISHQQLQKYETGTNRLSAGMLSSVARALRVPIAELF
QTSDATSQEARDPVSESRARCHALIDRTSSVGKLETMAKVLRALSAD

Sequences:

>Translated_127_residues
MMQEEIRAAGSRSPTKVDQQVGEKIRELRIAQNFTLSELGQELGISHQQLQKYETGTNRLSAGMLSSVARALRVPIAELF
QTSDATSQEARDPVSESRARCHALIDRTSSVGKLETMAKVLRALSAD
>Mature_127_residues
MMQEEIRAAGSRSPTKVDQQVGEKIRELRIAQNFTLSELGQELGISHQQLQKYETGTNRLSAGMLSSVARALRVPIAELF
QTSDATSQEARDPVSESRARCHALIDRTSSVGKLETMAKVLRALSAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 13956; Mature: 13956

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQEEIRAAGSRSPTKVDQQVGEKIRELRIAQNFTLSELGQELGISHQQLQKYETGTNRL
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHH
SAGMLSSVARALRVPIAELFQTSDATSQEARDPVSESRARCHALIDRTSSVGKLETMAKV
HHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
LRALSAD
HHHHCCC
>Mature Secondary Structure
MMQEEIRAAGSRSPTKVDQQVGEKIRELRIAQNFTLSELGQELGISHQQLQKYETGTNRL
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHH
SAGMLSSVARALRVPIAELFQTSDATSQEARDPVSESRARCHALIDRTSSVGKLETMAKV
HHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
LRALSAD
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]