Click here to switch to the map view.

The map label for this gene is gspJ [H]

Identifier: 114799191

GI number: 114799191

Start: 1936799

End: 1937419

Strand: Direct

Name: gspJ [H]

Synonym: HNE_1871

Alternate gene names: 114799191

Gene position: 1936799-1937419 (Clockwise)

Preceding gene: 114797577

Following gene: 114798322

Centisome position: 52.27

GC content: 59.58

Gene sequence:

>621_bases
ATGAGCTCCGCAGGCGCATCTCAGTCGGGCATCTCGCTCGTAGAAACAATGATCGCTCTTTTCGTGGTGGCGCTGCTTGC
GACCGCTGGCGGTATCATGCTCACCCAATCCCTGCGCGGTGCCCGTCTTGTTGAGGATCGAGGCTCTGACGCGCAGGAAC
TACAGACGGCACTCTCCGTCATCCGGGACGATTTCTCCGCCTTTGTCGATCGCCCCAGCCGCTCCGACGCCACATCTGAA
TTGCCAACCCGCTTTGAGGGCCAGCCCGTCCGCTTCGACGGGCGGATCGTCACCTTCATTCGCAATGGTTGGCCCAATCC
CGCCGGGCATCCTCGCAGCGACCTGCAACGCATTGAATATAGCTTCGTTGACGGCGCCTTGATCCGGCGGTCATGGAGCG
CCCCGGATGCCGGGCCAGGCACGGATATTGCCGAACAGACATTGTTGAACGGCCTGGAAAATATAACCGTCCGCTATGGC
CGCGAACAAGGCTGGCAGTCTGATTGGATCGTGCCGGCCTCATCGGCAGACACTCCGTTCCCGGACAAGATTGAACTGAC
GATGTCATTTGGCGAAGAAGACACACTGACTGCATTGTTTCGCCTAGGCCTGCGCGAATGA

Upstream 100 bases:

>100_bases
GGGCTGACCTGATCCAGATTTCAATCCGTGTAAAGCTGAAAGGTGAGGAGGAATCCATCCTCAGCGAATTGACGCTTCTG
CATCGTAGCGAGCGCGCGCC

Downstream 100 bases:

>100_bases
TAAAACCTCATCCCCAACGCGGCGCTGCCCTGCTGTCCATACTCCTGATCGTTGCGGCCCTGGCTGTTGCAGCTCTCATC
GCGACGACAGCGATTGCCCG

Product: general secretion pathway protein J

Products: NA

Alternate protein names: PilD-dependent protein pddD [H]

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MSSAGASQSGISLVETMIALFVVALLATAGGIMLTQSLRGARLVEDRGSDAQELQTALSVIRDDFSAFVDRPSRSDATSE
LPTRFEGQPVRFDGRIVTFIRNGWPNPAGHPRSDLQRIEYSFVDGALIRRSWSAPDAGPGTDIAEQTLLNGLENITVRYG
REQGWQSDWIVPASSADTPFPDKIELTMSFGEEDTLTALFRLGLRE

Sequences:

>Translated_206_residues
MSSAGASQSGISLVETMIALFVVALLATAGGIMLTQSLRGARLVEDRGSDAQELQTALSVIRDDFSAFVDRPSRSDATSE
LPTRFEGQPVRFDGRIVTFIRNGWPNPAGHPRSDLQRIEYSFVDGALIRRSWSAPDAGPGTDIAEQTLLNGLENITVRYG
REQGWQSDWIVPASSADTPFPDKIELTMSFGEEDTLTALFRLGLRE
>Mature_205_residues
SSAGASQSGISLVETMIALFVVALLATAGGIMLTQSLRGARLVEDRGSDAQELQTALSVIRDDFSAFVDRPSRSDATSEL
PTRFEGQPVRFDGRIVTFIRNGWPNPAGHPRSDLQRIEYSFVDGALIRRSWSAPDAGPGTDIAEQTLLNGLENITVRYGR
EQGWQSDWIVPASSADTPFPDKIELTMSFGEEDTLTALFRLGLRE

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG4795

COG function: function code U; Type II secretory pathway, component PulJ

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP J family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010055
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 22491; Mature: 22360

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAGASQSGISLVETMIALFVVALLATAGGIMLTQSLRGARLVEDRGSDAQELQTALSV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCCHHHHHHHHHH
IRDDFSAFVDRPSRSDATSELPTRFEGQPVRFDGRIVTFIRNGWPNPAGHPRSDLQRIEY
HHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEECCEEEEEEECCCCCCCCCCHHHHHHHHH
SFVDGALIRRSWSAPDAGPGTDIAEQTLLNGLENITVRYGREQGWQSDWIVPASSADTPF
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCC
PDKIELTMSFGEEDTLTALFRLGLRE
CCCEEEEEECCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSAGASQSGISLVETMIALFVVALLATAGGIMLTQSLRGARLVEDRGSDAQELQTALSV
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCCHHHHHHHHHH
IRDDFSAFVDRPSRSDATSELPTRFEGQPVRFDGRIVTFIRNGWPNPAGHPRSDLQRIEY
HHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEECCEEEEEEECCCCCCCCCCHHHHHHHHH
SFVDGALIRRSWSAPDAGPGTDIAEQTLLNGLENITVRYGREQGWQSDWIVPASSADTPF
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCC
PDKIELTMSFGEEDTLTALFRLGLRE
CCCEEEEEECCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1588814; 1309616; 10984043 [H]