Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is gspK [H]

Identifier: 114798322

GI number: 114798322

Start: 1937416

End: 1938387

Strand: Direct

Name: gspK [H]

Synonym: HNE_1872

Alternate gene names: 114798322

Gene position: 1937416-1938387 (Clockwise)

Preceding gene: 114799191

Following gene: 114800477

Centisome position: 52.29

GC content: 61.01

Gene sequence:

>972_bases
ATGATAAAACCTCATCCCCAACGCGGCGCTGCCCTGCTGTCCATACTCCTGATCGTTGCGGCCCTGGCTGTTGCAGCTCT
CATCGCGACGACAGCGATTGCCCGGCAAACCGATCTGGCAAAAGCCGCCGCCCGCCGCTCCGACGCCAGCTGGGCAGCTT
ATTCGGCCGAAGCTCTGGCGCTCAGTGCTGTTGGTGAACTCTCCACCCTCACCAATGGACAGCTCACACCCCTGACGACC
GGCCTCATGGAGCCTGTCGTTATTCCGGTGCGGGGCGGCGTTGTGTCTCTGGAAGTTTCGGACGCGTCCAACTGCTTCAA
TGTCAACGCTCTGGGTAGTCCAGATGAAGGCGCCGCTACACTCGCGCGCCTATCCTGGATCAGCCTCCTGGGCGACATGG
AAATCCCCACCACTGACGCAGCCAGCCTCGCCAACGCGCTCAGTGATTGGCTTGATGCAGACAGTGACGCACGCCAGGGC
GGCGCGGAGGACGGATATTATCTCACATTGCAGCCCGCCTACCGGGCTGCAAACCAGCTCATGGACAGCCCCCGCGAACT
GGCCTCAGTATTGGGGTATTCCAAGGCCCTTCAGGACGCTTTGGAACCTTTCATTTGCGCCCGGCGGGAGCCTTTGATGT
CGCGACTGAATATAAATACCCTCCGCCCGGATCAGGCACCGCTACTGCGCGCCAGCTATTCCGAGGCTCTCACTCTGGCG
GCGGCAACACGCATACTCGAAAATCGGCCGGAAACAGGATGGCCGGGTGTTGACCAGTTCGAAGCACTCCCTGACATACG
CACAATCCCTGAAGGTCAGAAGCGGACGGAAGCCTTGTCGACAACCAGCAGCATGTACCTGGCCGAAGGGCAAACAGTTC
TGGACGGCGGAAGCTGGCCCTTCTCCTTCGTCATTTCCGCCGGTGGCGGAGCCGCCCCCACCATTGTCTGGCGCAGGACG
GGGGAAGAATAA

Upstream 100 bases:

>100_bases
CCTCATCGGCAGACACTCCGTTCCCGGACAAGATTGAACTGACGATGTCATTTGGCGAAGAAGACACACTGACTGCATTG
TTTCGCCTAGGCCTGCGCGA

Downstream 100 bases:

>100_bases
TGAAATCTGTTCTCTATGTAGCCCTCCCTTCAGATGCGGATGGTTTGATCCAGATTGCCCAGGAACGCGGCGACCGCCTC
GAGATTGTAAATCACCGCGG

Product: general secretion pathway protein K

Products: NA

Alternate protein names: Pectic enzymes secretion protein OUTK [H]

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MIKPHPQRGAALLSILLIVAALAVAALIATTAIARQTDLAKAAARRSDASWAAYSAEALALSAVGELSTLTNGQLTPLTT
GLMEPVVIPVRGGVVSLEVSDASNCFNVNALGSPDEGAATLARLSWISLLGDMEIPTTDAASLANALSDWLDADSDARQG
GAEDGYYLTLQPAYRAANQLMDSPRELASVLGYSKALQDALEPFICARREPLMSRLNINTLRPDQAPLLRASYSEALTLA
AATRILENRPETGWPGVDQFEALPDIRTIPEGQKRTEALSTTSSMYLAEGQTVLDGGSWPFSFVISAGGGAAPTIVWRRT
GEE

Sequences:

>Translated_323_residues
MIKPHPQRGAALLSILLIVAALAVAALIATTAIARQTDLAKAAARRSDASWAAYSAEALALSAVGELSTLTNGQLTPLTT
GLMEPVVIPVRGGVVSLEVSDASNCFNVNALGSPDEGAATLARLSWISLLGDMEIPTTDAASLANALSDWLDADSDARQG
GAEDGYYLTLQPAYRAANQLMDSPRELASVLGYSKALQDALEPFICARREPLMSRLNINTLRPDQAPLLRASYSEALTLA
AATRILENRPETGWPGVDQFEALPDIRTIPEGQKRTEALSTTSSMYLAEGQTVLDGGSWPFSFVISAGGGAAPTIVWRRT
GEE
>Mature_323_residues
MIKPHPQRGAALLSILLIVAALAVAALIATTAIARQTDLAKAAARRSDASWAAYSAEALALSAVGELSTLTNGQLTPLTT
GLMEPVVIPVRGGVVSLEVSDASNCFNVNALGSPDEGAATLARLSWISLLGDMEIPTTDAASLANALSDWLDADSDARQG
GAEDGYYLTLQPAYRAANQLMDSPRELASVLGYSKALQDALEPFICARREPLMSRLNINTLRPDQAPLLRASYSEALTLA
AATRILENRPETGWPGVDQFEALPDIRTIPEGQKRTEALSTTSSMYLAEGQTVLDGGSWPFSFVISAGGGAAPTIVWRRT
GEE

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of the multiple pectic enzymes [H]

COG id: COG3156

COG function: function code U; Type II secretory pathway, component PulK

Gene ontology:

Cell location: Cell inner membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP K family [H]

Homologues:

Organism=Escherichia coli, GI1789729, Length=214, Percent_Identity=29.4392523364486, Blast_Score=91, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005628 [H]

Pfam domain/function: PF03934 GspK [H]

EC number: NA

Molecular weight: Translated: 34094; Mature: 34094

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKPHPQRGAALLSILLIVAALAVAALIATTAIARQTDLAKAAARRSDASWAAYSAEALA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LSAVGELSTLTNGQLTPLTTGLMEPVVIPVRGGVVSLEVSDASNCFNVNALGSPDEGAAT
HHHHHHHHHCCCCCCCHHHHHHHCCEEEEECCCEEEEEECCCCCCEEECCCCCCCHHHHH
LARLSWISLLGDMEIPTTDAASLANALSDWLDADSDARQGGAEDGYYLTLQPAYRAANQL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEECHHHHHHHHH
MDSPRELASVLGYSKALQDALEPFICARREPLMSRLNINTLRPDQAPLLRASYSEALTLA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
AATRILENRPETGWPGVDQFEALPDIRTIPEGQKRTEALSTTSSMYLAEGQTVLDGGSWP
HHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEECCCEEEECCCCC
FSFVISAGGGAAPTIVWRRTGEE
EEEEEECCCCCCCEEEEECCCCC
>Mature Secondary Structure
MIKPHPQRGAALLSILLIVAALAVAALIATTAIARQTDLAKAAARRSDASWAAYSAEALA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LSAVGELSTLTNGQLTPLTTGLMEPVVIPVRGGVVSLEVSDASNCFNVNALGSPDEGAAT
HHHHHHHHHCCCCCCCHHHHHHHCCEEEEECCCEEEEEECCCCCCEEECCCCCCCHHHHH
LARLSWISLLGDMEIPTTDAASLANALSDWLDADSDARQGGAEDGYYLTLQPAYRAANQL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEECHHHHHHHHH
MDSPRELASVLGYSKALQDALEPFICARREPLMSRLNINTLRPDQAPLLRASYSEALTLA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
AATRILENRPETGWPGVDQFEALPDIRTIPEGQKRTEALSTTSSMYLAEGQTVLDGGSWP
HHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEECCCEEEECCCCC
FSFVISAGGGAAPTIVWRRTGEE
EEEEEECCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8326859 [H]