| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799108
Identifier: 114799108
GI number: 114799108
Start: 1172752
End: 1173300
Strand: Direct
Name: 114799108
Synonym: HNE_1160
Alternate gene names: NA
Gene position: 1172752-1173300 (Clockwise)
Preceding gene: 114797162
Following gene: 114797527
Centisome position: 31.65
GC content: 66.3
Gene sequence:
>549_bases TTGATCGCTTTTTCAGGCAGCTGGTTCCGGCGGCGCTCCGCGCTCAAAAAGGTTGTGGCGGAGGCATATGGCCGTCTGGC GCGCGAAGCGCTGATGCCGGTGCACTATGAGGCGCACGGTGTTCCGGACACTTTTGAGGGCCGCGCGCAGATGGTTACGG CCATGACGGCCCTTGCCTGCAAGCGATTTGCCGATGTGGGCGGGCCGCTGGCGGGCGAACTGACCGAGCGGCTGAACGCG CGCGTCTTCGACGGATTTGATGCGGCATTCCGCGAAAAAGGCGTTGGGGATCATTCCATCGCGCGCAAGGTGCGCACGCT GGCCGAGGGGCATTCCGGGCTGGGGCGGGCGTTGATGGAGGCGCTGAGCGCGGGTGATTCGGACGGGGCGCTGGAAGATG TGCTGCGCCGCAACGGGGTGACACCGCCGGAAAAAGCAGGCGATCTGGCCAAGGCGCTGCGCCGCTACCGGGCCGTGTTT GAGGCGCAGACGGACGCGGAAATACTGAGCGGCGGGTTCGCCTGTGGCGCGAGCGAGCCGGGTAAATGA
Upstream 100 bases:
>100_bases TGCGGCCACAAGAGAAAGACGCGCCATGTATGGCTCCTATAGGCTTTGACCGCAGACCTAGCGACAGGTAACCGGGCTTG GCAAGCATTGGAGTACAGGG
Downstream 100 bases:
>100_bases TCGGCACGGGGTTGTGATGGACCGCATCTCGCCCGTTGCTTTGAGGGGCGGCGCCACTTAAACCCGCAAAAATACGCACA ACGCCGTAACTACGGTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MIAFSGSWFRRRSALKKVVAEAYGRLAREALMPVHYEAHGVPDTFEGRAQMVTAMTALACKRFADVGGPLAGELTERLNA RVFDGFDAAFREKGVGDHSIARKVRTLAEGHSGLGRALMEALSAGDSDGALEDVLRRNGVTPPEKAGDLAKALRRYRAVF EAQTDAEILSGGFACGASEPGK
Sequences:
>Translated_182_residues MIAFSGSWFRRRSALKKVVAEAYGRLAREALMPVHYEAHGVPDTFEGRAQMVTAMTALACKRFADVGGPLAGELTERLNA RVFDGFDAAFREKGVGDHSIARKVRTLAEGHSGLGRALMEALSAGDSDGALEDVLRRNGVTPPEKAGDLAKALRRYRAVF EAQTDAEILSGGFACGASEPGK >Mature_182_residues MIAFSGSWFRRRSALKKVVAEAYGRLAREALMPVHYEAHGVPDTFEGRAQMVTAMTALACKRFADVGGPLAGELTERLNA RVFDGFDAAFREKGVGDHSIARKVRTLAEGHSGLGRALMEALSAGDSDGALEDVLRRNGVTPPEKAGDLAKALRRYRAVF EAQTDAEILSGGFACGASEPGK
Specific function: Unknown
COG id: COG5452
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19453; Mature: 19453
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAFSGSWFRRRSALKKVVAEAYGRLAREALMPVHYEAHGVPDTFEGRAQMVTAMTALAC CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHH KRFADVGGPLAGELTERLNARVFDGFDAAFREKGVGDHSIARKVRTLAEGHSGLGRALME HHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH ALSAGDSDGALEDVLRRNGVTPPEKAGDLAKALRRYRAVFEAQTDAEILSGGFACGASEP HHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GK CC >Mature Secondary Structure MIAFSGSWFRRRSALKKVVAEAYGRLAREALMPVHYEAHGVPDTFEGRAQMVTAMTALAC CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHH KRFADVGGPLAGELTERLNARVFDGFDAAFREKGVGDHSIARKVRTLAEGHSGLGRALME HHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH ALSAGDSDGALEDVLRRNGVTPPEKAGDLAKALRRYRAVFEAQTDAEILSGGFACGASEP HHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA