| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is phoU [H]
Identifier: 114799041
GI number: 114799041
Start: 2105602
End: 2106288
Strand: Reverse
Name: phoU [H]
Synonym: HNE_2029
Alternate gene names: 114799041
Gene position: 2106288-2105602 (Counterclockwise)
Preceding gene: 114799554
Following gene: 114798462
Centisome position: 56.85
GC content: 59.83
Gene sequence:
>687_bases ATGTCGGATCATATCGTCTCTGCCTATTCGGATGAGCTGGACAAGCTCTCCTCGGACATCATGCGCATGGGCGGCATCGT GGAAACGATGATCGCGGACTCCTGCCGGGCGCTCAGCATCAATGATCCCGTCCTTGCCAGGGAAGTCATCGCCCGCGATC CGCAGGTCGATGTCATCGAAGCCGAAGTCGAAAAGCAGATCGTCAGCCTCATCGCGCGCCGCCAGCCCATGGGCCACGAC CTGCGCATGATCCTCTCTGCCCTGAAAACGTCCAACGAGCTTGAGCGCATTGGCGACCTCTCCAAGAACATCGCCAAACG CGCCCTGCGCCTGGATGATTTCGTCAGCGCGGAAATGCGCAACGCCATCCTGCGCATGTCGCGGCCCGTCGCGCGCCAGC TCAACGAAGTGCTCGATGCCTACGCCTCCAGCAATTCGGCGCTCGCCAAGAACGTCTGGTCCAGCGACGACGACATCGAC CAGCATTACAACGCGGTCTTCCGCGAAATGGTCACCTACCTCATCGAAGACCCCCGCCGCATCAGCGCCGGGGCACATAT GCTCTTTATAGCGAAGAACCTGGAACGGATTGGCGATCACTGCACCAACATCGCCGAATTCGTCTACTACCAGGCAGTGG GAGAATACCTGTCGACCATGGAACGGCCGAAGCTGGACCAGGTCTGA
Upstream 100 bases:
>100_bases ATCTCATCGAGATGGGAGAGACAGAACAGATCTTTACCAATCCGCGCGAAAAGCGGACCGAAGACTACATCACCGGCCGG TTCGGTTGAGGGAGAAGCAT
Downstream 100 bases:
>100_bases CGTCCATCGGAACAATTTACGGAGCCGAATGATGAAACCCTACGTGCTTGTCGCAGAAGACGAAAGCGCCGTCTCCGAGC TGCTGCTCTACAATCTCAAG
Product: phosphate transport system regulatory protein PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MSDHIVSAYSDELDKLSSDIMRMGGIVETMIADSCRALSINDPVLAREVIARDPQVDVIEAEVEKQIVSLIARRQPMGHD LRMILSALKTSNELERIGDLSKNIAKRALRLDDFVSAEMRNAILRMSRPVARQLNEVLDAYASSNSALAKNVWSSDDDID QHYNAVFREMVTYLIEDPRRISAGAHMLFIAKNLERIGDHCTNIAEFVYYQAVGEYLSTMERPKLDQV
Sequences:
>Translated_228_residues MSDHIVSAYSDELDKLSSDIMRMGGIVETMIADSCRALSINDPVLAREVIARDPQVDVIEAEVEKQIVSLIARRQPMGHD LRMILSALKTSNELERIGDLSKNIAKRALRLDDFVSAEMRNAILRMSRPVARQLNEVLDAYASSNSALAKNVWSSDDDID QHYNAVFREMVTYLIEDPRRISAGAHMLFIAKNLERIGDHCTNIAEFVYYQAVGEYLSTMERPKLDQV >Mature_227_residues SDHIVSAYSDELDKLSSDIMRMGGIVETMIADSCRALSINDPVLAREVIARDPQVDVIEAEVEKQIVSLIARRQPMGHDL RMILSALKTSNELERIGDLSKNIAKRALRLDDFVSAEMRNAILRMSRPVARQLNEVLDAYASSNSALAKNVWSSDDDIDQ HYNAVFREMVTYLIEDPRRISAGAHMLFIAKNLERIGDHCTNIAEFVYYQAVGEYLSTMERPKLDQV
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=228, Percent_Identity=33.7719298245614, Blast_Score=150, Evalue=6e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 25745; Mature: 25614
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDHIVSAYSDELDKLSSDIMRMGGIVETMIADSCRALSINDPVLAREVIARDPQVDVIE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHH AEVEKQIVSLIARRQPMGHDLRMILSALKTSNELERIGDLSKNIAKRALRLDDFVSAEMR HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NAILRMSRPVARQLNEVLDAYASSNSALAKNVWSSDDDIDQHYNAVFREMVTYLIEDPRR HHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHH ISAGAHMLFIAKNLERIGDHCTNIAEFVYYQAVGEYLSTMERPKLDQV HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SDHIVSAYSDELDKLSSDIMRMGGIVETMIADSCRALSINDPVLAREVIARDPQVDVIE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHH AEVEKQIVSLIARRQPMGHDLRMILSALKTSNELERIGDLSKNIAKRALRLDDFVSAEMR HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NAILRMSRPVARQLNEVLDAYASSNSALAKNVWSSDDDIDQHYNAVFREMVTYLIEDPRR HHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHH ISAGAHMLFIAKNLERIGDHCTNIAEFVYYQAVGEYLSTMERPKLDQV HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10629178 [H]