Click here to switch to the map view.

The map label for this gene is 114799025

Identifier: 114799025

GI number: 114799025

Start: 326937

End: 327551

Strand: Reverse

Name: 114799025

Synonym: HNE_0332

Alternate gene names: NA

Gene position: 327551-326937 (Counterclockwise)

Preceding gene: 114799030

Following gene: 114798141

Centisome position: 8.84

GC content: 59.51

Gene sequence:

>615_bases
ATGGCTGACATCTTTTCCTACCCGGCCTCGCTGTCGCTGATCATTCTGAATGTGATTGCCAGCCTGATCGCCTTCCGCAG
CGCGCCATTCAATAATCAGAACATCCTCTGGGTCGGCCCGATGAAAGACCGGGGCGAGTGGCACCGGCTGATCAGTTCGG
GCTTCCTGCATGTGAACGGGCCCCACCTCTTCCTCAACATGTATGGCCTCTACATGTTCGGGCCGGTGATCGAGCATGTG
CTGGGCGGGGTGAACTTCCTGATCATCTATCTGGCCTCCCTGATCGGGGGCAGCGTGTGGGCCTATTGGTGGAACCGGGA
TAATCCGGATTACCGAGCGGCAGGCGCGTCGGGCGCCTTGTCCGGCATCATTTTGGCCTTCTGCATGATCGCGCCCTTCT
CCATGCTGCTGTTTCTGTTCATTATTCCGATGTGGGGGATTGTGTTTGGCGTGGGCTTTGTGGTGCTGAGCTATGTGCTG
TCCCAGCGCGCCAACCGGATTATCGGGCATGAGGCGCATCTGGGTGGCGCAGTGGTGGGCGTTGTGACGACGCTGCTGGT
GGAACCGCGGGTGTGGACCTCCTTCATGGCGCAGATCGCCGAGAAGTTCGGCTGA

Upstream 100 bases:

>100_bases
CATGACGGGCTTGGGCGCTTGCCGCCCCCCGCTCCCCCTTGCTAAGCCGCCCGAAGCTGCTTCGGGCGGCTTTGTATTCT
CAGGGAAAGACTAACCCGCC

Downstream 100 bases:

>100_bases
GGCAGGATCAGGGCAATGGCGGGTGTGCGCGCGAAGTATGAGGCGAAGGTGGCCAGCGGCGCGCTGACGGTTGATCCCGT
TCAGCTGGAAGCAGCCGACC

Product: S54 family peptidase

Products: NA

Alternate protein names: S54 Family Peptidase; Integral Membrane Protein

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MADIFSYPASLSLIILNVIASLIAFRSAPFNNQNILWVGPMKDRGEWHRLISSGFLHVNGPHLFLNMYGLYMFGPVIEHV
LGGVNFLIIYLASLIGGSVWAYWWNRDNPDYRAAGASGALSGIILAFCMIAPFSMLLFLFIIPMWGIVFGVGFVVLSYVL
SQRANRIIGHEAHLGGAVVGVVTTLLVEPRVWTSFMAQIAEKFG

Sequences:

>Translated_204_residues
MADIFSYPASLSLIILNVIASLIAFRSAPFNNQNILWVGPMKDRGEWHRLISSGFLHVNGPHLFLNMYGLYMFGPVIEHV
LGGVNFLIIYLASLIGGSVWAYWWNRDNPDYRAAGASGALSGIILAFCMIAPFSMLLFLFIIPMWGIVFGVGFVVLSYVL
SQRANRIIGHEAHLGGAVVGVVTTLLVEPRVWTSFMAQIAEKFG
>Mature_203_residues
ADIFSYPASLSLIILNVIASLIAFRSAPFNNQNILWVGPMKDRGEWHRLISSGFLHVNGPHLFLNMYGLYMFGPVIEHVL
GGVNFLIIYLASLIGGSVWAYWWNRDNPDYRAAGASGALSGIILAFCMIAPFSMLLFLFIIPMWGIVFGVGFVVLSYVLS
QRANRIIGHEAHLGGAVVGVVTTLLVEPRVWTSFMAQIAEKFG

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22509; Mature: 22378

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADIFSYPASLSLIILNVIASLIAFRSAPFNNQNILWVGPMKDRGEWHRLISSGFLHVNG
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCEEECC
PHLFLNMYGLYMFGPVIEHVLGGVNFLIIYLASLIGGSVWAYWWNRDNPDYRAAGASGAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHH
SGIILAFCMIAPFSMLLFLFIIPMWGIVFGVGFVVLSYVLSQRANRIIGHEAHLGGAVVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VVTTLLVEPRVWTSFMAQIAEKFG
HHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ADIFSYPASLSLIILNVIASLIAFRSAPFNNQNILWVGPMKDRGEWHRLISSGFLHVNG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCEEECC
PHLFLNMYGLYMFGPVIEHVLGGVNFLIIYLASLIGGSVWAYWWNRDNPDYRAAGASGAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHH
SGIILAFCMIAPFSMLLFLFIIPMWGIVFGVGFVVLSYVLSQRANRIIGHEAHLGGAVVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VVTTLLVEPRVWTSFMAQIAEKFG
HHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA