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The map label for this gene is cirA [C]

Identifier: 114798992

GI number: 114798992

Start: 1646125

End: 1648494

Strand: Reverse

Name: cirA [C]

Synonym: HNE_1611

Alternate gene names: 114798992

Gene position: 1648494-1646125 (Counterclockwise)

Preceding gene: 114800158

Following gene: 114798174

Centisome position: 44.49

GC content: 55.99

Gene sequence:

>2370_bases
ATGCAACAGGGTACGAGGGCGCAGCTGCTGGCTTGCGTAAGCATTATTGGATTGACCTTACCGGCCTGGGGGCAGGAAGA
ACCCTCCGCACAGGAGCCCTACGTCCTGGACGGTGTTGTGGTTACAGCCCGCTTCAAAGCAGAATCCACGCAGGACATCG
GGGCCAGCGTGGCGGCGATCTCTGATGAAGATATTGAACGTCTCGGCATCCGGGATTTTGACGATATCAGCCGACTCGTC
GCGGGTGTTCAGAACGTCAAATCGCAGCAGAATGCGAACAATATTGCCATTCGCGGCGTCGTCGATTCAAAGCCGGATGC
CCTCTATTCGACCAGCTCTCTTTACAGCATCTTCCTGGATGAGGTGTCAGTCGCAGCGCCTGGCCTCCAGCGTGACTTCA
GTTCCGTTGATCTCAATCGCGTTGAGATCATCCGGGGGCCCCAGCCTACCCTTTTCGGTGAAGGCGCTGTTGGCGGCGTC
GTTCGCTACTTCACCAATGACCCTTATCTCGATGGCTCAACCGTAACGGGGTATGCCCGCGGCCAGGTCGAATCCATCAC
GGATGGCGGCATCGCTTATAGCGGTGAAAACGCGACCTCGCTGATCTTTGCGCCGGGAAAGGCAGGCCTTCGGGTCTCGG
GCTTCTATCGTAAGGATGAGGGCTTTATCGACAATCCTGCTGAAGGCGAAGACGTCAACGATTTCGACAGCATCGGAGGC
AGGGCCGTTCTGCTGGCTCGGCCGACGGACCAGCTTGAGCTGCGCCTGTCGGCCTTCCTGATGCGCGATGAGATGGGCGA
ATCAAGCCAGGTTGATCCAGGCTCAGACCCGGAAGATCTCATTTTTTCCGCTTCGCCTCTCAGCGGTGTGTACAAGGATG
ATTTCGACCTCTATTCCGGCCGCATCACATATGACGCCGGCCCGTTGAGCGTGACATCCATCACCGGCCATTATGAGCGG
ACAAATTCAGAGTCCCGCTTCAGCGCCTCCAATACATTTGGCCTGGCGCCGTTTTTCGCTTCCGATACGCCCGGCACCAC
AATCGACTCAACCACATTCCAGACAGTCGACCGGGAGCAAAGTCAGTTCTCTCAGGAATTGCGATTTGTCTCCGACTTTG
AAGGGCCGCTGAACTTCACAGGCGGGCTTTATTATCGTGACAAGGACATTGAAGAGCGCGCGACGCTGGATTGCGCGGGC
TGCGCGCCCGTAACGTCACCTTCCTCACGGTTTCTTCTTGACCAGTTCACCACGACCAACTCGGAACAGTATTCAGGCTT
CATTGACGGCACTTACAGCATCACAGACCGATTCCGTGTCATCGCCGGGGCCCGCTATATCGATGATACCGTCAGTGTGA
AGCTGGTTACGAACAATGTGATCAATCTCAATCCGAGATTTGATGGCGGCGGAAACATTATTCCCTGGACGGAGTCTGAT
CCACTCGGGTTTGCATCTCCAATCGACATTCTTGTTGGCGCAGGCTTCGGAGATGAGTTTGAATTCAAGCTGTCCAAAAC
CCTTCCACGCATCGGGGTGGAGTTTGATGTCAATGACGACATGCTCATCTATGCCAGCGCTGCTGAAGGAACACGCAACG
GCGGGATCGGCCAGGCTGTCGCCGCACTGACCACTTCCGGCGGAGATCCCGCGGTCTTTTATGACAATCTGAGCTATGAT
GCGGACGAGGTTGTCACTCTGGAAGGCGGCATCAAGGCAACCTGGTTGGGCGGCGCGCTCACGACGAATGCCGGCATATT
CCAGACCAGATTCAAGGATACGCAGATCCTTGTAATGTTGCCTGCTTCCAATGTGGTGAACGGCCCGGATCAGGATATCA
TCGGCCTTGAGTTTGAGACGGCTTACCGTTTCAGCGACACGCTTTCCGGTTTCCTGAACGCAACACTTCTGGATACAGAA
TTCAAAGGCAATTACGCCACTACAAATACGCTTCCTCCGGGCGCATCATCGCCCTTCTATGACCTGAAATCAGGCAATGA
AGCCCCCCAAGCGCCTTCGCTTTCCTTCTCGACCGGCTACACCTATGCGCGCCCGCTGAATGATACCTGGCAAATCACAT
CTTCGGGCGTGTTTCAGTATGTCGGCGAGCGGTACTCTGATGTGCAGAACTATCGGTCTTCGGAGCTTGATCCTCTTGAG
ATCCTGAACCTGCGCCTCGGACTTGAGAGTGACCGCTGGTCAGCGAGCCTGTTCGCAACCAACCTGCTGAACGATGTCGA
AGCCGTTCGTGTGGATGCGAACGTTCTGGCTCAGTCCGTCGGTCCGGATGGCGTTCTGGATTCAGCGCCCATTTCGGTCT
CTGTGAACCGGCCGAGGTCGTTCGGTCTCAGTCTCTCCCTGCGCTACTAG

Upstream 100 bases:

>100_bases
GCGGGCAATTCAAAGATCCTCTTCGCTGGGGCCATAAAACTGTTGTAATTTTCAATAACCGTGTCTTATTTTTTAACAGC
ACCATAAAAGAGAGGACGCT

Downstream 100 bases:

>100_bases
TACAGGGGACTTTGTCCGGCATCTGAACCCTCCGGATGCCGGACATTTTTTCATAGAGCATGTCCAGCTGACATGTTTGT
CCGCCCTGTCCGCGAACCAC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Receptor Domain Protein; NB-Dependent Receptor-Like Protein; Outer Membrane Protein; NB-Dependent Receptor Protein; Outer Membrane Receptor Family Protein; Nb-Dependent Receptor; NB Dependent Receptor; NB-Dependent Siderophore Receptor; NB-Dependent Receptor Plug Domain Protein; NB-Dependent Outer Membrane Receptor; Outer Membrane Protein nB-Dependent Receptor; Receptor -Mostly Fe Transport; NB-Dependent Siderophore Receptor Protein

Number of amino acids: Translated: 789; Mature: 789

Protein sequence:

>789_residues
MQQGTRAQLLACVSIIGLTLPAWGQEEPSAQEPYVLDGVVVTARFKAESTQDIGASVAAISDEDIERLGIRDFDDISRLV
AGVQNVKSQQNANNIAIRGVVDSKPDALYSTSSLYSIFLDEVSVAAPGLQRDFSSVDLNRVEIIRGPQPTLFGEGAVGGV
VRYFTNDPYLDGSTVTGYARGQVESITDGGIAYSGENATSLIFAPGKAGLRVSGFYRKDEGFIDNPAEGEDVNDFDSIGG
RAVLLARPTDQLELRLSAFLMRDEMGESSQVDPGSDPEDLIFSASPLSGVYKDDFDLYSGRITYDAGPLSVTSITGHYER
TNSESRFSASNTFGLAPFFASDTPGTTIDSTTFQTVDREQSQFSQELRFVSDFEGPLNFTGGLYYRDKDIEERATLDCAG
CAPVTSPSSRFLLDQFTTTNSEQYSGFIDGTYSITDRFRVIAGARYIDDTVSVKLVTNNVINLNPRFDGGGNIIPWTESD
PLGFASPIDILVGAGFGDEFEFKLSKTLPRIGVEFDVNDDMLIYASAAEGTRNGGIGQAVAALTTSGGDPAVFYDNLSYD
ADEVVTLEGGIKATWLGGALTTNAGIFQTRFKDTQILVMLPASNVVNGPDQDIIGLEFETAYRFSDTLSGFLNATLLDTE
FKGNYATTNTLPPGASSPFYDLKSGNEAPQAPSLSFSTGYTYARPLNDTWQITSSGVFQYVGERYSDVQNYRSSELDPLE
ILNLRLGLESDRWSASLFATNLLNDVEAVRVDANVLAQSVGPDGVLDSAPISVSVNRPRSFGLSLSLRY

Sequences:

>Translated_789_residues
MQQGTRAQLLACVSIIGLTLPAWGQEEPSAQEPYVLDGVVVTARFKAESTQDIGASVAAISDEDIERLGIRDFDDISRLV
AGVQNVKSQQNANNIAIRGVVDSKPDALYSTSSLYSIFLDEVSVAAPGLQRDFSSVDLNRVEIIRGPQPTLFGEGAVGGV
VRYFTNDPYLDGSTVTGYARGQVESITDGGIAYSGENATSLIFAPGKAGLRVSGFYRKDEGFIDNPAEGEDVNDFDSIGG
RAVLLARPTDQLELRLSAFLMRDEMGESSQVDPGSDPEDLIFSASPLSGVYKDDFDLYSGRITYDAGPLSVTSITGHYER
TNSESRFSASNTFGLAPFFASDTPGTTIDSTTFQTVDREQSQFSQELRFVSDFEGPLNFTGGLYYRDKDIEERATLDCAG
CAPVTSPSSRFLLDQFTTTNSEQYSGFIDGTYSITDRFRVIAGARYIDDTVSVKLVTNNVINLNPRFDGGGNIIPWTESD
PLGFASPIDILVGAGFGDEFEFKLSKTLPRIGVEFDVNDDMLIYASAAEGTRNGGIGQAVAALTTSGGDPAVFYDNLSYD
ADEVVTLEGGIKATWLGGALTTNAGIFQTRFKDTQILVMLPASNVVNGPDQDIIGLEFETAYRFSDTLSGFLNATLLDTE
FKGNYATTNTLPPGASSPFYDLKSGNEAPQAPSLSFSTGYTYARPLNDTWQITSSGVFQYVGERYSDVQNYRSSELDPLE
ILNLRLGLESDRWSASLFATNLLNDVEAVRVDANVLAQSVGPDGVLDSAPISVSVNRPRSFGLSLSLRY
>Mature_789_residues
MQQGTRAQLLACVSIIGLTLPAWGQEEPSAQEPYVLDGVVVTARFKAESTQDIGASVAAISDEDIERLGIRDFDDISRLV
AGVQNVKSQQNANNIAIRGVVDSKPDALYSTSSLYSIFLDEVSVAAPGLQRDFSSVDLNRVEIIRGPQPTLFGEGAVGGV
VRYFTNDPYLDGSTVTGYARGQVESITDGGIAYSGENATSLIFAPGKAGLRVSGFYRKDEGFIDNPAEGEDVNDFDSIGG
RAVLLARPTDQLELRLSAFLMRDEMGESSQVDPGSDPEDLIFSASPLSGVYKDDFDLYSGRITYDAGPLSVTSITGHYER
TNSESRFSASNTFGLAPFFASDTPGTTIDSTTFQTVDREQSQFSQELRFVSDFEGPLNFTGGLYYRDKDIEERATLDCAG
CAPVTSPSSRFLLDQFTTTNSEQYSGFIDGTYSITDRFRVIAGARYIDDTVSVKLVTNNVINLNPRFDGGGNIIPWTESD
PLGFASPIDILVGAGFGDEFEFKLSKTLPRIGVEFDVNDDMLIYASAAEGTRNGGIGQAVAALTTSGGDPAVFYDNLSYD
ADEVVTLEGGIKATWLGGALTTNAGIFQTRFKDTQILVMLPASNVVNGPDQDIIGLEFETAYRFSDTLSGFLNATLLDTE
FKGNYATTNTLPPGASSPFYDLKSGNEAPQAPSLSFSTGYTYARPLNDTWQITSSGVFQYVGERYSDVQNYRSSELDPLE
ILNLRLGLESDRWSASLFATNLLNDVEAVRVDANVLAQSVGPDGVLDSAPISVSVNRPRSFGLSLSLRY

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788478, Length=218, Percent_Identity=27.5229357798165, Blast_Score=66, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85155; Mature: 85155

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQGTRAQLLACVSIIGLTLPAWGQEEPSAQEPYVLDGVVVTARFKAESTQDIGASVAAI
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHCCCEEEEE
SDEDIERLGIRDFDDISRLVAGVQNVKSQQNANNIAIRGVVDSKPDALYSTSSLYSIFLD
CCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEHHHHHHHHHH
EVSVAAPGLQRDFSSVDLNRVEIIRGPQPTLFGEGAVGGVVRYFTNDPYLDGSTVTGYAR
HHHHCCCCHHHCCCCCCCCEEEEEECCCCCEECCCCCCCEEEEECCCCCCCCCEEEEEEC
GQVESITDGGIAYSGENATSLIFAPGKAGLRVSGFYRKDEGFIDNPAEGEDVNDFDSIGG
CCEEEECCCCEEECCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHCCC
RAVLLARPTDQLELRLSAFLMRDEMGESSQVDPGSDPEDLIFSASPLSGVYKDDFDLYSG
EEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCEECC
RITYDAGPLSVTSITGHYERTNSESRFSASNTFGLAPFFASDTPGTTIDSTTFQTVDREQ
EEEECCCCEEEEEEECCHHCCCCCCCCCCCCCCCCCEEECCCCCCCEECCCHHHHHHHHH
SQFSQELRFVSDFEGPLNFTGGLYYRDKDIEERATLDCAGCAPVTSPSSRFLLDQFTTTN
HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHCEEECCCCCCCCCCCCEEEEECCCCC
SEQYSGFIDGTYSITDRFRVIAGARYIDDTVSVKLVTNNVINLNPRFDGGGNIIPWTESD
CHHCCEEECCEEEHHHCEEEEECCEEECCCEEEEEEECCEEEECCCCCCCCCEECCCCCC
PLGFASPIDILVGAGFGDEFEFKLSKTLPRIGVEFDVNDDMLIYASAAEGTRNGGIGQAV
CCCCCCCCCEEEECCCCCCEEEEEHHCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHEE
AALTTSGGDPAVFYDNLSYDADEVVTLEGGIKATWLGGALTTNAGIFQTRFKDTQILVML
HEEECCCCCCEEEECCCCCCCCCEEEECCCEEEEEECCEEECCCCEEEEECCCCEEEEEE
PASNVVNGPDQDIIGLEFETAYRFSDTLSGFLNATLLDTEFKGNYATTNTLPPGASSPFY
CCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCEEEEEEECCCCEEECCCCCCCCCCCCE
DLKSGNEAPQAPSLSFSTGYTYARPLNDTWQITSSGVFQYVGERYSDVQNYRSSELDPLE
ECCCCCCCCCCCCCEECCCCEEECCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCHHH
ILNLRLGLESDRWSASLFATNLLNDVEAVRVDANVLAQSVGPDGVLDSAPISVSVNRPRS
EEEEEECCCCCCCCHHHHHHHHHCCHHHEEECHHHHHHHCCCCCCCCCCCEEEEECCCCC
FGLSLSLRY
CCEEEEEEC
>Mature Secondary Structure
MQQGTRAQLLACVSIIGLTLPAWGQEEPSAQEPYVLDGVVVTARFKAESTQDIGASVAAI
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHCCCEEEEE
SDEDIERLGIRDFDDISRLVAGVQNVKSQQNANNIAIRGVVDSKPDALYSTSSLYSIFLD
CCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEHHHHHHHHHH
EVSVAAPGLQRDFSSVDLNRVEIIRGPQPTLFGEGAVGGVVRYFTNDPYLDGSTVTGYAR
HHHHCCCCHHHCCCCCCCCEEEEEECCCCCEECCCCCCCEEEEECCCCCCCCCEEEEEEC
GQVESITDGGIAYSGENATSLIFAPGKAGLRVSGFYRKDEGFIDNPAEGEDVNDFDSIGG
CCEEEECCCCEEECCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHCCC
RAVLLARPTDQLELRLSAFLMRDEMGESSQVDPGSDPEDLIFSASPLSGVYKDDFDLYSG
EEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCEECC
RITYDAGPLSVTSITGHYERTNSESRFSASNTFGLAPFFASDTPGTTIDSTTFQTVDREQ
EEEECCCCEEEEEEECCHHCCCCCCCCCCCCCCCCCEEECCCCCCCEECCCHHHHHHHHH
SQFSQELRFVSDFEGPLNFTGGLYYRDKDIEERATLDCAGCAPVTSPSSRFLLDQFTTTN
HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHCEEECCCCCCCCCCCCEEEEECCCCC
SEQYSGFIDGTYSITDRFRVIAGARYIDDTVSVKLVTNNVINLNPRFDGGGNIIPWTESD
CHHCCEEECCEEEHHHCEEEEECCEEECCCEEEEEEECCEEEECCCCCCCCCEECCCCCC
PLGFASPIDILVGAGFGDEFEFKLSKTLPRIGVEFDVNDDMLIYASAAEGTRNGGIGQAV
CCCCCCCCCEEEECCCCCCEEEEEHHCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHEE
AALTTSGGDPAVFYDNLSYDADEVVTLEGGIKATWLGGALTTNAGIFQTRFKDTQILVML
HEEECCCCCCEEEECCCCCCCCCEEEECCCEEEEEECCEEECCCCEEEEECCCCEEEEEE
PASNVVNGPDQDIIGLEFETAYRFSDTLSGFLNATLLDTEFKGNYATTNTLPPGASSPFY
CCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCEEEEEEECCCCEEECCCCCCCCCCCCE
DLKSGNEAPQAPSLSFSTGYTYARPLNDTWQITSSGVFQYVGERYSDVQNYRSSELDPLE
ECCCCCCCCCCCCCEECCCCEEECCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCHHH
ILNLRLGLESDRWSASLFATNLLNDVEAVRVDANVLAQSVGPDGVLDSAPISVSVNRPRS
EEEEEECCCCCCCCHHHHHHHHHCCHHHEEECHHHHHHHCCCCCCCCCCCEEEEECCCCC
FGLSLSLRY
CCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA