| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798976
Identifier: 114798976
GI number: 114798976
Start: 1671783
End: 1672937
Strand: Direct
Name: 114798976
Synonym: HNE_1635
Alternate gene names: NA
Gene position: 1671783-1672937 (Clockwise)
Preceding gene: 114799284
Following gene: 114798139
Centisome position: 45.12
GC content: 62.08
Gene sequence:
>1155_bases ATGCCTATTCCCTCGTCCCGTCCTCCAGCGCCGCAGCGCACCCAGTCAGAATGTTGCTACCGGTCGGCGCTTGACCGGGA AGCCACCTTCTGCGGCGATTGCGGCAAGCCGCTCCTGCGCTGCATGGCGTGCGAGGAATGCGCCGGACTGCTGGATGATC GTGGACTTTGCACAGTTTGTGTTGCGCCATATCTCCAGGTGGATGCGGGTGCATTAACGGCCGCAAAGGTCGGTAGCGCT GTGGCGCTCCCCATGTCGATCGGCAACCTCTCTGGTGTCGGGCGCCCGCTGTTTGTCACCGGGCTTTGGAGCCGCGAGGG CTCTGGCGCCTGGCGGGAGGAAAATCTGGGCTGGGAACGCCTGGATGCCGGCGAATCTCGCCCCATCAGCATCGTTGCAA ACCAGATCGAACACGCCGGCGCCCATGGCCTGCAACTCCTCATCGCCCTGGCCAGCCGTTGGCGCTGGCGCCAGGAAAAT TTCGCCTTCACCGCCAACCTCACTTTGATGGTTGAAGACGCCGGATCGGATAAAGGCCCGGTCGTCAATATTGGCGGCGA GAGCGCGGGACACGGGAATCTTGTCTACATATCAGGCAAGAATGACACGAAACCGGATGTTCAGCGGTCTGATGAAGCGG TTCAGCTTGCGCTCGTAAGAGCAGAGCGGGAGGAGCGCCGCCTCAGCCTTCGGGGTCTGGATGCAGACAATTGGATTCCC CGCAATGCTGAATTCATCTGGAAAGATTTCGGCGAGGGCGACGCGCCCTTCAACGGCCCGATCATGACGCAGGACGGCAT GCTCGCCGCCGGGCGCAGCCGCACGCGCCGTCAGGGCGGGGAAGGGGATGTCAGGCTTCTGGTGTTTGATGCCGACGGCG GGCTGGATGAAACCGCCAGCCGCCTCATCTCCCGGCGCCACTTTGAACTCTATATTGAATCAGACCGCCTCATCCTTCGC GTAACGGCCGGTAGTGGCCTGCGCGTAAACGGCAACGCTTACGGAGAAGGCAAGACCGTTCGCCTCGCCGATGGCGATGT CATCGCGCCGATGGTTTCGGCGCCCGATACGCTCTGCCTTCGCGTCAATTTCCGCACAGAACATGGCAGCGCGCGCCAGA TCACGCTTCAGCGCCTCGCCACAAACAGAAAATAG
Upstream 100 bases:
>100_bases TGACGCCGCCAAGGTCGATTGCCCAAAATGCGGACGCTCGATGCCTGCCAAAGCCAATTTCTGCACCGGCTGCGGCCACA AGATGCGGACCTGACGTCCG
Downstream 100 bases:
>100_bases GGCTGCCTCATGACCAAGTGCAAAAATTGCAACGCGCAGATGGCAGACGGCGACCGGTTCTGCCCCGAATGCGGCGCCGA CCAGCAGGGCGGCCGTATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MPIPSSRPPAPQRTQSECCYRSALDREATFCGDCGKPLLRCMACEECAGLLDDRGLCTVCVAPYLQVDAGALTAAKVGSA VALPMSIGNLSGVGRPLFVTGLWSREGSGAWREENLGWERLDAGESRPISIVANQIEHAGAHGLQLLIALASRWRWRQEN FAFTANLTLMVEDAGSDKGPVVNIGGESAGHGNLVYISGKNDTKPDVQRSDEAVQLALVRAEREERRLSLRGLDADNWIP RNAEFIWKDFGEGDAPFNGPIMTQDGMLAAGRSRTRRQGGEGDVRLLVFDADGGLDETASRLISRRHFELYIESDRLILR VTAGSGLRVNGNAYGEGKTVRLADGDVIAPMVSAPDTLCLRVNFRTEHGSARQITLQRLATNRK
Sequences:
>Translated_384_residues MPIPSSRPPAPQRTQSECCYRSALDREATFCGDCGKPLLRCMACEECAGLLDDRGLCTVCVAPYLQVDAGALTAAKVGSA VALPMSIGNLSGVGRPLFVTGLWSREGSGAWREENLGWERLDAGESRPISIVANQIEHAGAHGLQLLIALASRWRWRQEN FAFTANLTLMVEDAGSDKGPVVNIGGESAGHGNLVYISGKNDTKPDVQRSDEAVQLALVRAEREERRLSLRGLDADNWIP RNAEFIWKDFGEGDAPFNGPIMTQDGMLAAGRSRTRRQGGEGDVRLLVFDADGGLDETASRLISRRHFELYIESDRLILR VTAGSGLRVNGNAYGEGKTVRLADGDVIAPMVSAPDTLCLRVNFRTEHGSARQITLQRLATNRK >Mature_383_residues PIPSSRPPAPQRTQSECCYRSALDREATFCGDCGKPLLRCMACEECAGLLDDRGLCTVCVAPYLQVDAGALTAAKVGSAV ALPMSIGNLSGVGRPLFVTGLWSREGSGAWREENLGWERLDAGESRPISIVANQIEHAGAHGLQLLIALASRWRWRQENF AFTANLTLMVEDAGSDKGPVVNIGGESAGHGNLVYISGKNDTKPDVQRSDEAVQLALVRAEREERRLSLRGLDADNWIPR NAEFIWKDFGEGDAPFNGPIMTQDGMLAAGRSRTRRQGGEGDVRLLVFDADGGLDETASRLISRRHFELYIESDRLILRV TAGSGLRVNGNAYGEGKTVRLADGDVIAPMVSAPDTLCLRVNFRTEHGSARQITLQRLATNRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41704; Mature: 41572
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIPSSRPPAPQRTQSECCYRSALDREATFCGDCGKPLLRCMACEECAGLLDDRGLCTVC CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE VAPYLQVDAGALTAAKVGSAVALPMSIGNLSGVGRPLFVTGLWSREGSGAWREENLGWER ECCCEEECCCCEEHHHCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHH LDAGESRPISIVANQIEHAGAHGLQLLIALASRWRWRQENFAFTANLTLMVEDAGSDKGP CCCCCCCCHHHEEHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCC VVNIGGESAGHGNLVYISGKNDTKPDVQRSDEAVQLALVRAEREERRLSLRGLDADNWIP EEEECCCCCCCCCEEEEECCCCCCCCHHCCCHHEEEHHHHHHHHHHHEEEECCCCCCCCC RNAEFIWKDFGEGDAPFNGPIMTQDGMLAAGRSRTRRQGGEGDVRLLVFDADGGLDETAS CCCHHHEEECCCCCCCCCCCEECCCCCEECCCCHHHHCCCCCCEEEEEEECCCCHHHHHH RLISRRHFELYIESDRLILRVTAGSGLRVNGNAYGEGKTVRLADGDVIAPMVSAPDTLCL HHHHCCEEEEEEECCCEEEEEECCCCEEECCCCCCCCCEEEEECCCEEEHHHCCCCEEEE RVNFRTEHGSARQITLQRLATNRK EEEEECCCCCHHHEEHHHHHCCCC >Mature Secondary Structure PIPSSRPPAPQRTQSECCYRSALDREATFCGDCGKPLLRCMACEECAGLLDDRGLCTVC CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE VAPYLQVDAGALTAAKVGSAVALPMSIGNLSGVGRPLFVTGLWSREGSGAWREENLGWER ECCCEEECCCCEEHHHCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHH LDAGESRPISIVANQIEHAGAHGLQLLIALASRWRWRQENFAFTANLTLMVEDAGSDKGP CCCCCCCCHHHEEHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCC VVNIGGESAGHGNLVYISGKNDTKPDVQRSDEAVQLALVRAEREERRLSLRGLDADNWIP EEEECCCCCCCCCEEEEECCCCCCCCHHCCCHHEEEHHHHHHHHHHHEEEECCCCCCCCC RNAEFIWKDFGEGDAPFNGPIMTQDGMLAAGRSRTRRQGGEGDVRLLVFDADGGLDETAS CCCHHHEEECCCCCCCCCCCEECCCCCEECCCCHHHHCCCCCCEEEEEEECCCCHHHHHH RLISRRHFELYIESDRLILRVTAGSGLRVNGNAYGEGKTVRLADGDVIAPMVSAPDTLCL HHHHCCEEEEEEECCCEEEEEECCCCEEECCCCCCCCCEEEEECCCEEEHHHCCCCEEEE RVNFRTEHGSARQITLQRLATNRK EEEEECCCCCHHHEEHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA