| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799284
Identifier: 114799284
GI number: 114799284
Start: 1670115
End: 1671776
Strand: Direct
Name: 114799284
Synonym: HNE_1634
Alternate gene names: NA
Gene position: 1670115-1671776 (Clockwise)
Preceding gene: 114797413
Following gene: 114798976
Centisome position: 45.08
GC content: 60.29
Gene sequence:
>1662_bases ATGGCCTCTATGCCTCTTGTCCTGACCGATCCGAACCTCCTTGCCGAGTTCGTGCGGGAAGCCGAATTCAAGACATTCTT TGAAAAGCGCTTTGCGACGCCTCCGGACCTTGCCGCCCTTCTGTTCAAGAATGGTCAGCTCATGGACAGTTTCCAGGGCG CCCATTTCTCCGTCGGCGGACTGGCCAACGCGATCAAGGGCGTCGTTGGCGGCTCCACACACATCGCCATCCTCTTGGCT GATCTCAAACCCTTCCAGGTCAGCATGAGCTTTGAAGGCGTCTCGCGCGACAATGTGGAGGTTGCCGGTCTTTGCACCTT TGACCTTCAACTCAATCCTGACAAACCCTCAAACATTCTCGGCCTCATGCGCGGCGTGGCCCGCAATGAACGGGAAGCTG AAGAAGAGGGCGATCTGCCCGGGCGCAAGGCGCTTTCCACACTCGATGTGCTGGAGCGTATCGCGCCGCATGTCTCTGAC CGTGTGCTGGAAGCCGTCATCAGCCGGACTGACGCCGCCGACATCCGCGGCAACACCGGCATGCAGGACAAGATCCAGGC CGACATGATGAAAGAGGCCGAGCGCGTGCTCGGCGATCTCGGTGTCCTCGTCCGCGCCGTGTCTGTCGAATGGGCGCTCA ACAAGGTCGAAATCGAAGCCTTCAAACGTGCGCAGATTGCCCGCGATCAGGATGCGCTCGACTATCAGCTTGGCCTTCTC AAGCGCGAAATGTCTCGCGAGGCAGACGCCACCCAGTTCAAGCTCGAAACCTCCGCAGACCTCGCCAAGGTCCAGAACGC GACAGACGACGAACTGGCGATGATGGTGCTTGAGAGCGAAGTCCGCTTTCTCGATGCCCGGGAAGCCGTCACGCGCCGCC ATGAAATGGAAGTGCTCGCCCATGAGGTTGAAATCCTGCGCACCGAGCGCGCAGCGAAGATGGAAAACGAGATTGCCGAC GCCGGCCATCTCATTGACCTGACCAAGGAAGCTTCGCGCCTTCGCAAGACTGAAATCGAAATCGAAGACCTTGATGCGCG CCATGTTCAGAACCTCAAGAAAATGGGGGTGATGACCGATCTGGAGCTGAACGAGCGCCGCCAGCGCATGGAGCTTGAGA TAGCCCGCCTTGCGCAGGAGCAGGCCGCCAAGAATCTCGAGACCATGATGAAGCTCGAAGCCGCCGGCGATGACCGCGCC GCTGATCGGGGCATGCGTGTCAACAAATCCGAGACGGAGAACAAGGTCGCCCTCATGAAAGCCGAAGCGGATGCCCGCAC GGCTCAACTGATGGCGGGTTCGAAGATGAGCCCGGAACAGATCCTGGCGATCAATGCCGGCCTCTCGCCCCATGTCGCAG AGGTTCTCAAAGAGCAGGCGCGGGCACAGTCCAGCAACAGCCAGGAATCTATGGAAATCATGCGGGAGCTGATCAAGGGT GCCTCCGATGAGCGCGCCGTCAGCCGCCAGCATGAACTCGACATCCTCAAGGCAGGCATGACCGGCGCCACCGGTGTCGC TCATGGCGCGGGCGGCAAGGAGGGCGGGGCCGCAGATACGTCCAGCAATGACGCCGCCAAGGTCGATTGCCCAAAATGCG GACGCTCGATGCCTGCCAAAGCCAATTTCTGCACCGGCTGCGGCCACAAGATGCGGACCTGA
Upstream 100 bases:
>100_bases CGTGATGGCCCATCCCATCGCCTTCTCCGTCTGCGCCGTGATCATTCTGGCTCGCATTTACACTCAATTCTTCATGACCG CTAAGAAGGAGGGCTGATCC
Downstream 100 bases:
>100_bases CGTCCGATGCCTATTCCCTCGTCCCGTCCTCCAGCGCCGCAGCGCACCCAGTCAGAATGTTGCTACCGGTCGGCGCTTGA CCGGGAAGCCACCTTCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MASMPLVLTDPNLLAEFVREAEFKTFFEKRFATPPDLAALLFKNGQLMDSFQGAHFSVGGLANAIKGVVGGSTHIAILLA DLKPFQVSMSFEGVSRDNVEVAGLCTFDLQLNPDKPSNILGLMRGVARNEREAEEEGDLPGRKALSTLDVLERIAPHVSD RVLEAVISRTDAADIRGNTGMQDKIQADMMKEAERVLGDLGVLVRAVSVEWALNKVEIEAFKRAQIARDQDALDYQLGLL KREMSREADATQFKLETSADLAKVQNATDDELAMMVLESEVRFLDAREAVTRRHEMEVLAHEVEILRTERAAKMENEIAD AGHLIDLTKEASRLRKTEIEIEDLDARHVQNLKKMGVMTDLELNERRQRMELEIARLAQEQAAKNLETMMKLEAAGDDRA ADRGMRVNKSETENKVALMKAEADARTAQLMAGSKMSPEQILAINAGLSPHVAEVLKEQARAQSSNSQESMEIMRELIKG ASDERAVSRQHELDILKAGMTGATGVAHGAGGKEGGAADTSSNDAAKVDCPKCGRSMPAKANFCTGCGHKMRT
Sequences:
>Translated_553_residues MASMPLVLTDPNLLAEFVREAEFKTFFEKRFATPPDLAALLFKNGQLMDSFQGAHFSVGGLANAIKGVVGGSTHIAILLA DLKPFQVSMSFEGVSRDNVEVAGLCTFDLQLNPDKPSNILGLMRGVARNEREAEEEGDLPGRKALSTLDVLERIAPHVSD RVLEAVISRTDAADIRGNTGMQDKIQADMMKEAERVLGDLGVLVRAVSVEWALNKVEIEAFKRAQIARDQDALDYQLGLL KREMSREADATQFKLETSADLAKVQNATDDELAMMVLESEVRFLDAREAVTRRHEMEVLAHEVEILRTERAAKMENEIAD AGHLIDLTKEASRLRKTEIEIEDLDARHVQNLKKMGVMTDLELNERRQRMELEIARLAQEQAAKNLETMMKLEAAGDDRA ADRGMRVNKSETENKVALMKAEADARTAQLMAGSKMSPEQILAINAGLSPHVAEVLKEQARAQSSNSQESMEIMRELIKG ASDERAVSRQHELDILKAGMTGATGVAHGAGGKEGGAADTSSNDAAKVDCPKCGRSMPAKANFCTGCGHKMRT >Mature_552_residues ASMPLVLTDPNLLAEFVREAEFKTFFEKRFATPPDLAALLFKNGQLMDSFQGAHFSVGGLANAIKGVVGGSTHIAILLAD LKPFQVSMSFEGVSRDNVEVAGLCTFDLQLNPDKPSNILGLMRGVARNEREAEEEGDLPGRKALSTLDVLERIAPHVSDR VLEAVISRTDAADIRGNTGMQDKIQADMMKEAERVLGDLGVLVRAVSVEWALNKVEIEAFKRAQIARDQDALDYQLGLLK REMSREADATQFKLETSADLAKVQNATDDELAMMVLESEVRFLDAREAVTRRHEMEVLAHEVEILRTERAAKMENEIADA GHLIDLTKEASRLRKTEIEIEDLDARHVQNLKKMGVMTDLELNERRQRMELEIARLAQEQAAKNLETMMKLEAAGDDRAA DRGMRVNKSETENKVALMKAEADARTAQLMAGSKMSPEQILAINAGLSPHVAEVLKEQARAQSSNSQESMEIMRELIKGA SDERAVSRQHELDILKAGMTGATGVAHGAGGKEGGAADTSSNDAAKVDCPKCGRSMPAKANFCTGCGHKMRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60592; Mature: 60461
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASMPLVLTDPNLLAEFVREAEFKTFFEKRFATPPDLAALLFKNGQLMDSFQGAHFSVGG CCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHCCCCCEEHHH LANAIKGVVGGSTHIAILLADLKPFQVSMSFEGVSRDNVEVAGLCTFDLQLNPDKPSNIL HHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCHHHH GLMRGVARNEREAEEEGDLPGRKALSTLDVLERIAPHVSDRVLEAVISRTDAADIRGNTG HHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCC MQDKIQADMMKEAERVLGDLGVLVRAVSVEWALNKVEIEAFKRAQIARDQDALDYQLGLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH KREMSREADATQFKLETSADLAKVQNATDDELAMMVLESEVRFLDAREAVTRRHEMEVLA HHHHHCCCCCCEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HEVEILRTERAAKMENEIADAGHLIDLTKEASRLRKTEIEIEDLDARHVQNLKKMGVMTD HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHCCCCC LELNERRQRMELEIARLAQEQAAKNLETMMKLEAAGDDRAADRGMRVNKSETENKVALMK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCEEEEE AEADARTAQLMAGSKMSPEQILAINAGLSPHVAEVLKEQARAQSSNSQESMEIMRELIKG ECCCHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC ASDERAVSRQHELDILKAGMTGATGVAHGAGGKEGGAADTSSNDAAKVDCPKCGRSMPAK CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ANFCTGCGHKMRT CCCCCCCCCCCCC >Mature Secondary Structure ASMPLVLTDPNLLAEFVREAEFKTFFEKRFATPPDLAALLFKNGQLMDSFQGAHFSVGG CCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHCCCCCEEHHH LANAIKGVVGGSTHIAILLADLKPFQVSMSFEGVSRDNVEVAGLCTFDLQLNPDKPSNIL HHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCHHHH GLMRGVARNEREAEEEGDLPGRKALSTLDVLERIAPHVSDRVLEAVISRTDAADIRGNTG HHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCC MQDKIQADMMKEAERVLGDLGVLVRAVSVEWALNKVEIEAFKRAQIARDQDALDYQLGLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH KREMSREADATQFKLETSADLAKVQNATDDELAMMVLESEVRFLDAREAVTRRHEMEVLA HHHHHCCCCCCEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HEVEILRTERAAKMENEIADAGHLIDLTKEASRLRKTEIEIEDLDARHVQNLKKMGVMTD HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHCCCCC LELNERRQRMELEIARLAQEQAAKNLETMMKLEAAGDDRAADRGMRVNKSETENKVALMK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCEEEEE AEADARTAQLMAGSKMSPEQILAINAGLSPHVAEVLKEQARAQSSNSQESMEIMRELIKG ECCCHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC ASDERAVSRQHELDILKAGMTGATGVAHGAGGKEGGAADTSSNDAAKVDCPKCGRSMPAK CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ANFCTGCGHKMRT CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA