Click here to switch to the map view.

The map label for this gene is yghQ [H]

Identifier: 114798863

GI number: 114798863

Start: 1626486

End: 1627790

Strand: Reverse

Name: yghQ [H]

Synonym: HNE_1594

Alternate gene names: 114798863

Gene position: 1627790-1626486 (Counterclockwise)

Preceding gene: 114800432

Following gene: 114797857

Centisome position: 43.93

GC content: 60.0

Gene sequence:

>1305_bases
GTGGCTGACACAGCGTTGAAACCTGAAGGACCGATCAAGCGGGCCATTCGCAACGCGGGCTGGCTGCTGGCCGGAAAGGG
TACGGGCGGCGTTTTCAGCCTGTTTTACCTGGCTTTGACGGCGCGCAGCCTGGGTGCTGAAGAGTTTGGCATTTTCGCCC
TGATCCTGTCCTACGGCCAGGCTGTCACCAATCTGGCTCAATTCCAGTCCTGGCAGACGGTGGTTCGATACGGCGCCCAG
CATGAGGCGGCTGAGCGACCCGACAAGCTGCTCAGAATCATCGTGTTCGCAACTCTGTTGGATTTTGGCGCAGCGGCCGC
GGGCACGCTTCTGGCGATTGGCGGCGTGTACCTGATCGGCGGGGAATTTGGCTGGACAGAAGGCGACAAGAACCTTGCCG
CCCTCTTCTGCCTGTCATTGCTATTTGGCGTGCGGGGCGCGCCCACCGGCGTATTGCGCCTGTTCGACCGGTTTGACATC
GCTGCCTATGCTGAAACGGTGTTGCCCACCATGCGCCTGCTGGGCGCGTTAGCAGCCTGGGCGAGCGGCGCTTCGATTGC
CGGTTATCTGGCGGCCTGGGCAGCAGCAGAAGTCGTGACAACAGCGGCTATGTGGTGGGCAAGCCTTCGGGAAATCAGGC
GCAAATTCAGGGAACCGGTGGCCGGTTCGCCTATCCGGGGAGTTATTGGAGAAAATGAGGGTCTCTGGGCGTTTGCCTGG
ACAACCAACATCAATACCTCGCTGAATCTGGTCTGGAAGCAGTTTCCTGTCTTGGTCGTCGGCTGGGCTGTCGACGCGGT
TGCGGCGGGCGGCTTCAGAATCGCGACCCAGCTCGTTGGCGCACTGAACAAGCCGACAATTGCCCTTGCGAGGGCCATTT
ATCCCGAATTTGCCAAGCTGGCGGTTGTCGACAAGAGCCTGATTCAGAGAACCGTCGTGCGGGCGTGCCTGATTGGCGCG
GCAGCAGGAGGCGTGGTGCTGATCATTGTACTGTTGGCCGGCAAAGGTGTTCTTGAGTTGATCGCCGGCGAAGACCATCT
CTTTGTTTTCCCAATACTTATTATCCTGACAGTTGCTGCCATGTTCGATTTGAGCGGTGTAGCCATAGAGCCGGCGCTGG
TCGCGCTGGGGCGTCCGGGAACCGTGCTGCGAGTTCGGGGGATAACCTCGATCCTCTATGCTGTCGCACTGATGTGGGCT
GTCGATGTGTATGGCAGTCTCGGCGCAGCGGTCACGACCGTTGGCGCGTCCATATTGCTTCTGGCCCTGATGCTGGGCGC
TTTCAGGAAGTATGGCGCCCGATAG

Upstream 100 bases:

>100_bases
GCCGAACTGCTTCCCGATAGCGGTCATAATATTCTCGTGACTATCCCAAACCGAATGGGGACAATAAAAGGCGCGATCGA
GATGGAAGGAACGCCGCCGG

Downstream 100 bases:

>100_bases
ACGGGCAATCACAGCCGCTGGAAACCACTCTAGTTGGCATGTGCAATTTACTGGCCGGCAGGTACGATTTGAAGCCTGTT
TATTGTCTGTTTTTCCAGAA

Product: polysaccharide biosynthesis family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MADTALKPEGPIKRAIRNAGWLLAGKGTGGVFSLFYLALTARSLGAEEFGIFALILSYGQAVTNLAQFQSWQTVVRYGAQ
HEAAERPDKLLRIIVFATLLDFGAAAAGTLLAIGGVYLIGGEFGWTEGDKNLAALFCLSLLFGVRGAPTGVLRLFDRFDI
AAYAETVLPTMRLLGALAAWASGASIAGYLAAWAAAEVVTTAAMWWASLREIRRKFREPVAGSPIRGVIGENEGLWAFAW
TTNINTSLNLVWKQFPVLVVGWAVDAVAAGGFRIATQLVGALNKPTIALARAIYPEFAKLAVVDKSLIQRTVVRACLIGA
AAGGVVLIIVLLAGKGVLELIAGEDHLFVFPILIILTVAAMFDLSGVAIEPALVALGRPGTVLRVRGITSILYAVALMWA
VDVYGSLGAAVTTVGASILLLALMLGAFRKYGAR

Sequences:

>Translated_434_residues
MADTALKPEGPIKRAIRNAGWLLAGKGTGGVFSLFYLALTARSLGAEEFGIFALILSYGQAVTNLAQFQSWQTVVRYGAQ
HEAAERPDKLLRIIVFATLLDFGAAAAGTLLAIGGVYLIGGEFGWTEGDKNLAALFCLSLLFGVRGAPTGVLRLFDRFDI
AAYAETVLPTMRLLGALAAWASGASIAGYLAAWAAAEVVTTAAMWWASLREIRRKFREPVAGSPIRGVIGENEGLWAFAW
TTNINTSLNLVWKQFPVLVVGWAVDAVAAGGFRIATQLVGALNKPTIALARAIYPEFAKLAVVDKSLIQRTVVRACLIGA
AAGGVVLIIVLLAGKGVLELIAGEDHLFVFPILIILTVAAMFDLSGVAIEPALVALGRPGTVLRVRGITSILYAVALMWA
VDVYGSLGAAVTTVGASILLLALMLGAFRKYGAR
>Mature_433_residues
ADTALKPEGPIKRAIRNAGWLLAGKGTGGVFSLFYLALTARSLGAEEFGIFALILSYGQAVTNLAQFQSWQTVVRYGAQH
EAAERPDKLLRIIVFATLLDFGAAAAGTLLAIGGVYLIGGEFGWTEGDKNLAALFCLSLLFGVRGAPTGVLRLFDRFDIA
AYAETVLPTMRLLGALAAWASGASIAGYLAAWAAAEVVTTAAMWWASLREIRRKFREPVAGSPIRGVIGENEGLWAFAWT
TNINTSLNLVWKQFPVLVVGWAVDAVAAGGFRIATQLVGALNKPTIALARAIYPEFAKLAVVDKSLIQRTVVRACLIGAA
AGGVVLIIVLLAGKGVLELIAGEDHLFVFPILIILTVAAMFDLSGVAIEPALVALGRPGTVLRVRGITSILYAVALMWAV
DVYGSLGAAVTTVGASILLLALMLGAFRKYGAR

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994915, Length=341, Percent_Identity=27.2727272727273, Blast_Score=140, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 45803; Mature: 45671

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTALKPEGPIKRAIRNAGWLLAGKGTGGVFSLFYLALTARSLGAEEFGIFALILSYGQ
CCCCCCCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
AVTNLAQFQSWQTVVRYGAQHEAAERPDKLLRIIVFATLLDFGAAAAGTLLAIGGVYLIG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC
GEFGWTEGDKNLAALFCLSLLFGVRGAPTGVLRLFDRFDIAAYAETVLPTMRLLGALAAW
CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASGASIAGYLAAWAAAEVVTTAAMWWASLREIRRKFREPVAGSPIRGVIGENEGLWAFAW
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
TTNINTSLNLVWKQFPVLVVGWAVDAVAAGGFRIATQLVGALNKPTIALARAIYPEFAKL
ECCCCCHHHHHHHHCCHHEEHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AVVDKSLIQRTVVRACLIGAAAGGVVLIIVLLAGKGVLELIAGEDHLFVFPILIILTVAA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEHHCCCCCHHHHHHHHHHHHHH
MFDLSGVAIEPALVALGRPGTVLRVRGITSILYAVALMWAVDVYGSLGAAVTTVGASILL
HHCCCCCEECHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALMLGAFRKYGAR
HHHHHHHHHHHCCC
>Mature Secondary Structure 
ADTALKPEGPIKRAIRNAGWLLAGKGTGGVFSLFYLALTARSLGAEEFGIFALILSYGQ
CCCCCCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
AVTNLAQFQSWQTVVRYGAQHEAAERPDKLLRIIVFATLLDFGAAAAGTLLAIGGVYLIG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC
GEFGWTEGDKNLAALFCLSLLFGVRGAPTGVLRLFDRFDIAAYAETVLPTMRLLGALAAW
CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASGASIAGYLAAWAAAEVVTTAAMWWASLREIRRKFREPVAGSPIRGVIGENEGLWAFAW
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
TTNINTSLNLVWKQFPVLVVGWAVDAVAAGGFRIATQLVGALNKPTIALARAIYPEFAKL
ECCCCCHHHHHHHHCCHHEEHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AVVDKSLIQRTVVRACLIGAAAGGVVLIIVLLAGKGVLELIAGEDHLFVFPILIILTVAA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEHHCCCCCHHHHHHHHHHHHHH
MFDLSGVAIEPALVALGRPGTVLRVRGITSILYAVALMWAVDVYGSLGAAVTTVGASILL
HHCCCCCEECHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALMLGAFRKYGAR
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]