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The map label for this gene is 114798813

Identifier: 114798813

GI number: 114798813

Start: 2821244

End: 2821957

Strand: Reverse

Name: 114798813

Synonym: HNE_2661

Alternate gene names: NA

Gene position: 2821957-2821244 (Counterclockwise)

Preceding gene: 114797374

Following gene: 114798278

Centisome position: 76.17

GC content: 61.62

Gene sequence:

>714_bases
ATGGACAGCCAGATAAAACGCCCCCCGATCATCAATGCGCCCCTCCCGCTGACGGTGTTTGCCGTAGTTTTGGTGGTGCT
GCATGGCTTGCGGGTGTTCGCGCCGCAGAGTTTTCAGATCGAGGTGCTGTATCATGGCGCGCTGTTTCCGGAGCGATTCT
GGGGATGGACCGATGGCCAGGTGATGACGCCCAGCGGCGTGCCGGCCTATCCCGGTGTGCTGGCGGCGCTGGCGCCCTTC
GTGCTCAGCGCGCTGCTGCATGGCGACTGGTTTCATGTCATTCTCAACGCCGTATTCCTGATCGCCATAGGCAAGCCGGT
GCTTGAAATACTCACGGTTCTGAAGGGCCGGTATGGCGCGGGCGTGATTGCAACCCTCTTTGTCCTGATCTTTATTTCGC
AGGCCGGGGGCGGGGTGGTTTACCTGCTGCTGAACAACCCCACCGGCGCAATTGCGGTTGGCGCATCCGGCGGCCTGAGC
GGCCTGATGGGGGCCTATTTTCTGATGCGGGACGGGGCCGCGGCGCGGCTGCGCAGCCGGCCTTTTCTGACGGTTACCGC
CATCTTCATCATCGCAAACATGATCTTTGCCTTCGTCGGCCCGTCACTGCTGGGCGCGTCGATTGCCTGGGAAGTGCATG
TGGGCGGCTATATTGCTGGGGCTGTTTTCGGGCGCCTGGTGATCTGGGACGCGGTACGCAAGCTCGATATATGA

Upstream 100 bases:

>100_bases
ATCTAGTTTCAGCGCCGGGCGAGGCAAATTTAACGAACGCGCCTACATAAAAGAGGCGAGGGGCTGCCCGAATCGGCGCG
CCAATGAGCGGAGAAACCGA

Downstream 100 bases:

>100_bases
GCCAAAACAGGGCCATTTAACGCAACTTTCACGGGAGTCGCTTCGCTGGCCCCGCTATGGTATCCTTACGGAGGATGAGA
TGGCCCGAAGGCCGCCGCCT

Product: S54 family peptidase

Products: NA

Alternate protein names: Rhomboid Family Protein

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MDSQIKRPPIINAPLPLTVFAVVLVVLHGLRVFAPQSFQIEVLYHGALFPERFWGWTDGQVMTPSGVPAYPGVLAALAPF
VLSALLHGDWFHVILNAVFLIAIGKPVLEILTVLKGRYGAGVIATLFVLIFISQAGGGVVYLLLNNPTGAIAVGASGGLS
GLMGAYFLMRDGAAARLRSRPFLTVTAIFIIANMIFAFVGPSLLGASIAWEVHVGGYIAGAVFGRLVIWDAVRKLDI

Sequences:

>Translated_237_residues
MDSQIKRPPIINAPLPLTVFAVVLVVLHGLRVFAPQSFQIEVLYHGALFPERFWGWTDGQVMTPSGVPAYPGVLAALAPF
VLSALLHGDWFHVILNAVFLIAIGKPVLEILTVLKGRYGAGVIATLFVLIFISQAGGGVVYLLLNNPTGAIAVGASGGLS
GLMGAYFLMRDGAAARLRSRPFLTVTAIFIIANMIFAFVGPSLLGASIAWEVHVGGYIAGAVFGRLVIWDAVRKLDI
>Mature_237_residues
MDSQIKRPPIINAPLPLTVFAVVLVVLHGLRVFAPQSFQIEVLYHGALFPERFWGWTDGQVMTPSGVPAYPGVLAALAPF
VLSALLHGDWFHVILNAVFLIAIGKPVLEILTVLKGRYGAGVIATLFVLIFISQAGGGVVYLLLNNPTGAIAVGASGGLS
GLMGAYFLMRDGAAARLRSRPFLTVTAIFIIANMIFAFVGPSLLGASIAWEVHVGGYIAGAVFGRLVIWDAVRKLDI

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25206; Mature: 25206

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSQIKRPPIINAPLPLTVFAVVLVVLHGLRVFAPQSFQIEVLYHGALFPERFWGWTDGQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHCCCCCCC
VMTPSGVPAYPGVLAALAPFVLSALLHGDWFHVILNAVFLIAIGKPVLEILTVLKGRYGA
EECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
GVIATLFVLIFISQAGGGVVYLLLNNPTGAIAVGASGGLSGLMGAYFLMRDGAAARLRSR
CHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHCCC
PFLTVTAIFIIANMIFAFVGPSLLGASIAWEVHVGGYIAGAVFGRLVIWDAVRKLDI
CCHHHHHHHHHHHHHHHHHCHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDSQIKRPPIINAPLPLTVFAVVLVVLHGLRVFAPQSFQIEVLYHGALFPERFWGWTDGQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHCCCCCCC
VMTPSGVPAYPGVLAALAPFVLSALLHGDWFHVILNAVFLIAIGKPVLEILTVLKGRYGA
EECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
GVIATLFVLIFISQAGGGVVYLLLNNPTGAIAVGASGGLSGLMGAYFLMRDGAAARLRSR
CHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHCCC
PFLTVTAIFIIANMIFAFVGPSLLGASIAWEVHVGGYIAGAVFGRLVIWDAVRKLDI
CCHHHHHHHHHHHHHHHHHCHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA