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The map label for this gene is irgA [H]

Identifier: 114797374

GI number: 114797374

Start: 2822511

End: 2825147

Strand: Reverse

Name: irgA [H]

Synonym: HNE_2662

Alternate gene names: 114797374

Gene position: 2825147-2822511 (Counterclockwise)

Preceding gene: 114798692

Following gene: 114798813

Centisome position: 76.25

GC content: 62.0

Gene sequence:

>2637_bases
ATGGCGAAACTGCCCAGCAAACTCCCAGGAAGGAAATTCCAAGTGTCCAATACGAACCCGGCATCCGCAGGCCACACGGC
CCTGCGCGCGATGCTCTGCCTTGGCGTTGGCCTCACAGCTCTTTCGGCTGTCGCCGCGCCCGCCCTCGCCCAGGAAAGCG
AGACTGAAGATACCCGCACCATGCAGACCGTGACCATCACGGCGACCAAGCGCGAACAGACGCTGCAGGATGTGCCGATT
GCCGTTTCGGTGGTTGATGAAGCGACCATCGAGCGGGCCGCGATTGTTGACCTCAACGATTTGCAGTCGATCATTCCGTC
GCTGCGCGTGGGCCAGCTGCAATCTTCGGCCAACACCAACTTCGTCATCCGGGGCTTTGGCAACGGCGCGAACAATGCGG
GTATCGAGCCGTCGGTCGGCGTCTTTATTGACGGCGTTTACCGCTCGCGTTCGGCGGCGCAGATTTCCGACCTTCCGAAT
ATCGAGCGGGTTGAGGTGCTGCGCGGGCCGCAATCGACGCTGTTTGGCAAGAACGCATCTGCGGGCGTGATCTCGGTTGT
TACCAAGAAGCCGCAATACGAGCTGGGCGGCGTGGTCGACGCGACGCTGAGCAATGAGAATGGCTACAGGGCGAACGGTT
ATGTCACCGGGCCGCTGGCGGAGAACCTCGCGGGCGCTGTGGGCGTGACCTACAACAAGCGCGACGGCTATGTGGACGAT
ATCGGCACAGGCACGGAGACCAACGAGCGTAATCGCTGGGGCATCCGCGGCGACCTGATTTTTGAACCCAATGTCAACAC
GACGTTCCGCCTGCTGGGCGACTATGACAATATCGACGAGCTGTGCTGTGCGGCCGGCAATGTCATCAATGGGCCGACGG
GCGGCATCATTCAGGCCATCGGCGGGACGCTTGTTCCGGAAGATCCCTACAGCTACCGCGTGGCGTATAACCTTCCGTCC
ACGAACAAGGTGGATAATGGCGGGGTTTCGCTGCAGGGCGACTTTGACTTCTCCGGCATGCGCCTGACCTCGATCACGGC
TTACCGGATTTCGAATCTGGAAACCAATCAGGACTCCGACTTTACCGGCGCCAACCTGCTGGGTGAGAACTCCAACAAGA
CCGACATCGACACCTTTACCCAGGAAATCCGCCTGACCTCCACCGATGGCGACCGCCTCGACTGGATGGTGGGCGGCTTC
TATTTCGATGAGACGGTCGAGATCGAGAACGCGCTGCTGTTTGGCGATGATTACCGCAACTATGCCAACGCGCTGGCAGG
CGGGCTCAACCCCGCAACCGGCACGATCACCGACATTCTGGCGGGGCTGGAAAGCGCGCTGGGCCTGCCGGTGGGCACGA
CCTTCGCTCAGGAAGGCCAGGGCTTCCGCGATGATGCCGGGCAGGACAACACCGCCTGGTCTCTTTTCGGGACGGTGGAT
TACCGCCTGACTGACCGTCTGACGGCGACGGTTGGCCTGAACTACACCGAGGACAAGAAGGACGCTTACAACAACATCGC
GGCCAGCGATGTGCTGTCGTCGCTGGACCTGGTGGCCATCGGCTTTGCCCAGGCGCTGGGCGGCGTGGGTGTGGACGCAA
CAGACCCGGCGCAGGTCGGCGCGTTTGCGGCGGCGTTCCCGACGGAGTTCGCAGCCATCCAGGCGGCGGTTCAGGACCCT
GCCTCCAATCCGCTGCTGGCGCTGCAGCCCTTGCAGTTCCTGCCGCCGTTCCTGGGCTTCCCGAACGTCGTCGAAGACGG
CCGCACCAAGGACTCTTCGACGACGTACACGCTGCGTCTGGCCTATGACGTGAACGACAACCTCAATACCTATGTCTCGT
ACGCTACGGGCTTCAAGGCGACCTCGTGGAACCTGTCGCGCGACTCGCGGCCATTTGCGCGGGACTTCATCTCCGGTTCG
CCGGTGACGAACCCGCCGTCCTCGCCGATTCGCGATGCGGGCCTTGCCCTGCCAAACCTGACGAGCGGCACACGCTATGC
CGGCCCGGAAGATTCGGCGGTGTTTGAGGTCGGCCTGAAGGGCGTCTATTCGACCGTGGCCTTTAACCTGGCCTATTTCG
ACCAGACGATCGAAGGCTTCCAGTCGAACGTCTTCACCGGAACGGGCTTTGCGCTGGCCAACGCCGGCAAGCAGTCCAAC
AAGGGTGTGGAATTCGACGTGTCCTGGAACCCGATCAACGACCTGCAACTGGTTGTTGCCGGTTCGGTTCAGGACCCGGT
GTATGACGAGTTCCCCAACTCTGCGAGCGGTGACCTGTCTGGCCAGACGCCTGCGGGCATTCCGGAAGTCGCCACATCGA
CAGCGGCGACCTACTTCTTTGATGTCGGCAGCTGGGACGCCTATGTCCGCGGCGACTGGCAATATGAGAGCCCGGTCGAC
CATTTCGACAGCGCGGCCGATCAGGCCCTCATCGGCGAGCAGAAGGAAGTCAGCACGTTCAACGCCTCTTCCGGCTTCAC
CAATGAGAACGGCCTGGGCGTGACGCTGTGGATCCGGAACATCTTCAATGACGAGTACATCACCACGGCTTTCCCGGCTG
TGGCGCAGGCTGGCTCGATCATGGGGTATCCCAGCGCGCCGCGCAGCTATGGCGTGACGGTCCGCAAGACGTTCTGA

Upstream 100 bases:

>100_bases
TGCCTGAGCGAGACGCTTGCCTAGCCGCGAATCGCCTGATTACAATCACGTCATAATAAAAAGAAACGGAGCCAGACCTT
GCCCTTCACCGAGGGCAGCG

Downstream 100 bases:

>100_bases
TCCGTCTGTCGCACATATATATATATGGAAAGCCCCGCCGCACTGGCGGGGCTTTTTTTGTGGCTCAGCGCGGCGGGCTG
GCCCGGAGGGAGAGAATCGC

Product: outer membrane receptor (OMR) family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 878; Mature: 877

Protein sequence:

>878_residues
MAKLPSKLPGRKFQVSNTNPASAGHTALRAMLCLGVGLTALSAVAAPALAQESETEDTRTMQTVTITATKREQTLQDVPI
AVSVVDEATIERAAIVDLNDLQSIIPSLRVGQLQSSANTNFVIRGFGNGANNAGIEPSVGVFIDGVYRSRSAAQISDLPN
IERVEVLRGPQSTLFGKNASAGVISVVTKKPQYELGGVVDATLSNENGYRANGYVTGPLAENLAGAVGVTYNKRDGYVDD
IGTGTETNERNRWGIRGDLIFEPNVNTTFRLLGDYDNIDELCCAAGNVINGPTGGIIQAIGGTLVPEDPYSYRVAYNLPS
TNKVDNGGVSLQGDFDFSGMRLTSITAYRISNLETNQDSDFTGANLLGENSNKTDIDTFTQEIRLTSTDGDRLDWMVGGF
YFDETVEIENALLFGDDYRNYANALAGGLNPATGTITDILAGLESALGLPVGTTFAQEGQGFRDDAGQDNTAWSLFGTVD
YRLTDRLTATVGLNYTEDKKDAYNNIAASDVLSSLDLVAIGFAQALGGVGVDATDPAQVGAFAAAFPTEFAAIQAAVQDP
ASNPLLALQPLQFLPPFLGFPNVVEDGRTKDSSTTYTLRLAYDVNDNLNTYVSYATGFKATSWNLSRDSRPFARDFISGS
PVTNPPSSPIRDAGLALPNLTSGTRYAGPEDSAVFEVGLKGVYSTVAFNLAYFDQTIEGFQSNVFTGTGFALANAGKQSN
KGVEFDVSWNPINDLQLVVAGSVQDPVYDEFPNSASGDLSGQTPAGIPEVATSTAATYFFDVGSWDAYVRGDWQYESPVD
HFDSAADQALIGEQKEVSTFNASSGFTNENGLGVTLWIRNIFNDEYITTAFPAVAQAGSIMGYPSAPRSYGVTVRKTF

Sequences:

>Translated_878_residues
MAKLPSKLPGRKFQVSNTNPASAGHTALRAMLCLGVGLTALSAVAAPALAQESETEDTRTMQTVTITATKREQTLQDVPI
AVSVVDEATIERAAIVDLNDLQSIIPSLRVGQLQSSANTNFVIRGFGNGANNAGIEPSVGVFIDGVYRSRSAAQISDLPN
IERVEVLRGPQSTLFGKNASAGVISVVTKKPQYELGGVVDATLSNENGYRANGYVTGPLAENLAGAVGVTYNKRDGYVDD
IGTGTETNERNRWGIRGDLIFEPNVNTTFRLLGDYDNIDELCCAAGNVINGPTGGIIQAIGGTLVPEDPYSYRVAYNLPS
TNKVDNGGVSLQGDFDFSGMRLTSITAYRISNLETNQDSDFTGANLLGENSNKTDIDTFTQEIRLTSTDGDRLDWMVGGF
YFDETVEIENALLFGDDYRNYANALAGGLNPATGTITDILAGLESALGLPVGTTFAQEGQGFRDDAGQDNTAWSLFGTVD
YRLTDRLTATVGLNYTEDKKDAYNNIAASDVLSSLDLVAIGFAQALGGVGVDATDPAQVGAFAAAFPTEFAAIQAAVQDP
ASNPLLALQPLQFLPPFLGFPNVVEDGRTKDSSTTYTLRLAYDVNDNLNTYVSYATGFKATSWNLSRDSRPFARDFISGS
PVTNPPSSPIRDAGLALPNLTSGTRYAGPEDSAVFEVGLKGVYSTVAFNLAYFDQTIEGFQSNVFTGTGFALANAGKQSN
KGVEFDVSWNPINDLQLVVAGSVQDPVYDEFPNSASGDLSGQTPAGIPEVATSTAATYFFDVGSWDAYVRGDWQYESPVD
HFDSAADQALIGEQKEVSTFNASSGFTNENGLGVTLWIRNIFNDEYITTAFPAVAQAGSIMGYPSAPRSYGVTVRKTF
>Mature_877_residues
AKLPSKLPGRKFQVSNTNPASAGHTALRAMLCLGVGLTALSAVAAPALAQESETEDTRTMQTVTITATKREQTLQDVPIA
VSVVDEATIERAAIVDLNDLQSIIPSLRVGQLQSSANTNFVIRGFGNGANNAGIEPSVGVFIDGVYRSRSAAQISDLPNI
ERVEVLRGPQSTLFGKNASAGVISVVTKKPQYELGGVVDATLSNENGYRANGYVTGPLAENLAGAVGVTYNKRDGYVDDI
GTGTETNERNRWGIRGDLIFEPNVNTTFRLLGDYDNIDELCCAAGNVINGPTGGIIQAIGGTLVPEDPYSYRVAYNLPST
NKVDNGGVSLQGDFDFSGMRLTSITAYRISNLETNQDSDFTGANLLGENSNKTDIDTFTQEIRLTSTDGDRLDWMVGGFY
FDETVEIENALLFGDDYRNYANALAGGLNPATGTITDILAGLESALGLPVGTTFAQEGQGFRDDAGQDNTAWSLFGTVDY
RLTDRLTATVGLNYTEDKKDAYNNIAASDVLSSLDLVAIGFAQALGGVGVDATDPAQVGAFAAAFPTEFAAIQAAVQDPA
SNPLLALQPLQFLPPFLGFPNVVEDGRTKDSSTTYTLRLAYDVNDNLNTYVSYATGFKATSWNLSRDSRPFARDFISGSP
VTNPPSSPIRDAGLALPNLTSGTRYAGPEDSAVFEVGLKGVYSTVAFNLAYFDQTIEGFQSNVFTGTGFALANAGKQSNK
GVEFDVSWNPINDLQLVVAGSVQDPVYDEFPNSASGDLSGQTPAGIPEVATSTAATYFFDVGSWDAYVRGDWQYESPVDH
FDSAADQALIGEQKEVSTFNASSGFTNENGLGVTLWIRNIFNDEYITTAFPAVAQAGSIMGYPSAPRSYGVTVRKTF

Specific function: Involved in the initial step of iron uptake by binding ferric vibriobactin, an iron chelatin siderophore that allows V.cholerae to extract iron from the environment [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1788478, Length=214, Percent_Identity=28.5046728971963, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010917 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 93436; Mature: 93305

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: PS00146 BETA_LACTAMASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLPSKLPGRKFQVSNTNPASAGHTALRAMLCLGVGLTALSAVAAPALAQESETEDTRT
CCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
MQTVTITATKREQTLQDVPIAVSVVDEATIERAAIVDLNDLQSIIPSLRVGQLQSSANTN
EEEEEEEECCHHHHHHCCCEEEEEECHHHHCCEEEEEHHHHHHHHCCCCHHHHHCCCCCC
FVIRGFGNGANNAGIEPSVGVFIDGVYRSRSAAQISDLPNIERVEVLRGPQSTLFGKNAS
EEEEECCCCCCCCCCCCCCCEEEECHHCCCCCHHHHCCCCCCHHHEECCCCHHHCCCCCC
AGVISVVTKKPQYELGGVVDATLSNENGYRANGYVTGPLAENLAGAVGVTYNKRDGYVDD
CCEEEEEECCCCCCCCCEEEEEECCCCCEEECCEEECCHHHHCCCCEEEEECCCCCCCCC
IGTGTETNERNRWGIRGDLIFEPNVNTTFRLLGDYDNIDELCCAAGNVINGPTGGIIQAI
CCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHH
GGTLVPEDPYSYRVAYNLPSTNKVDNGGVSLQGDFDFSGMRLTSITAYRISNLETNQDSD
CCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEEEEECCCCCCCCCC
FTGANLLGENSNKTDIDTFTQEIRLTSTDGDRLDWMVGGFYFDETVEIENALLFGDDYRN
CCCCEEECCCCCCCHHHHHHEEEEEECCCCCEEEEEEEEEEECCEEEECEEEEECCHHHH
YANALAGGLNPATGTITDILAGLESALGLPVGTTFAQEGQGFRDDAGQDNTAWSLFGTVD
HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEEEE
YRLTDRLTATVGLNYTEDKKDAYNNIAASDVLSSLDLVAIGFAQALGGVGVDATDPAQVG
EEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
AFAAAFPTEFAAIQAAVQDPASNPLLALQPLQFLPPFLGFPNVVEDGRTKDSSTTYTLRL
HHHHHCCHHHHHHHHHHHCCCCCCEEEECCHHHCCHHCCCCCHHCCCCCCCCCEEEEEEE
AYDVNDNLNTYVSYATGFKATSWNLSRDSRPFARDFISGSPVTNPPSSPIRDAGLALPNL
EEECCCCCCEEEEEECCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCHHHCCCCCCC
TSGTRYAGPEDSAVFEVGLKGVYSTVAFNLAYFDQTIEGFQSNVFTGTGFALANAGKQSN
CCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
KGVEFDVSWNPINDLQLVVAGSVQDPVYDEFPNSASGDLSGQTPAGIPEVATSTAATYFF
CCEEEEEECCCCCCEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHCCEEEEE
DVGSWDAYVRGDWQYESPVDHFDSAADQALIGEQKEVSTFNASSGFTNENGLGVTLWIRN
ECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCHHCCEEECCCCCCCCCCCEEEEEEEH
IFNDEYITTAFPAVAQAGSIMGYPSAPRSYGVTVRKTF
HCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure 
AKLPSKLPGRKFQVSNTNPASAGHTALRAMLCLGVGLTALSAVAAPALAQESETEDTRT
CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
MQTVTITATKREQTLQDVPIAVSVVDEATIERAAIVDLNDLQSIIPSLRVGQLQSSANTN
EEEEEEEECCHHHHHHCCCEEEEEECHHHHCCEEEEEHHHHHHHHCCCCHHHHHCCCCCC
FVIRGFGNGANNAGIEPSVGVFIDGVYRSRSAAQISDLPNIERVEVLRGPQSTLFGKNAS
EEEEECCCCCCCCCCCCCCCEEEECHHCCCCCHHHHCCCCCCHHHEECCCCHHHCCCCCC
AGVISVVTKKPQYELGGVVDATLSNENGYRANGYVTGPLAENLAGAVGVTYNKRDGYVDD
CCEEEEEECCCCCCCCCEEEEEECCCCCEEECCEEECCHHHHCCCCEEEEECCCCCCCCC
IGTGTETNERNRWGIRGDLIFEPNVNTTFRLLGDYDNIDELCCAAGNVINGPTGGIIQAI
CCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHH
GGTLVPEDPYSYRVAYNLPSTNKVDNGGVSLQGDFDFSGMRLTSITAYRISNLETNQDSD
CCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEEEEECCCCCCCCCC
FTGANLLGENSNKTDIDTFTQEIRLTSTDGDRLDWMVGGFYFDETVEIENALLFGDDYRN
CCCCEEECCCCCCCHHHHHHEEEEEECCCCCEEEEEEEEEEECCEEEECEEEEECCHHHH
YANALAGGLNPATGTITDILAGLESALGLPVGTTFAQEGQGFRDDAGQDNTAWSLFGTVD
HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEEEE
YRLTDRLTATVGLNYTEDKKDAYNNIAASDVLSSLDLVAIGFAQALGGVGVDATDPAQVG
EEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
AFAAAFPTEFAAIQAAVQDPASNPLLALQPLQFLPPFLGFPNVVEDGRTKDSSTTYTLRL
HHHHHCCHHHHHHHHHHHCCCCCCEEEECCHHHCCHHCCCCCHHCCCCCCCCCEEEEEEE
AYDVNDNLNTYVSYATGFKATSWNLSRDSRPFARDFISGSPVTNPPSSPIRDAGLALPNL
EEECCCCCCEEEEEECCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCHHHCCCCCCC
TSGTRYAGPEDSAVFEVGLKGVYSTVAFNLAYFDQTIEGFQSNVFTGTGFALANAGKQSN
CCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
KGVEFDVSWNPINDLQLVVAGSVQDPVYDEFPNSASGDLSGQTPAGIPEVATSTAATYFF
CCEEEEEECCCCCCEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHCCEEEEE
DVGSWDAYVRGDWQYESPVDHFDSAADQALIGEQKEVSTFNASSGFTNENGLGVTLWIRN
ECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCHHCCEEECCCCCCCCCCCEEEEEEEH
IFNDEYITTAFPAVAQAGSIMGYPSAPRSYGVTVRKTF
HCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1406279; 2174861 [H]