| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is yvbT [H]
Identifier: 114798770
GI number: 114798770
Start: 1412331
End: 1413335
Strand: Reverse
Name: yvbT [H]
Synonym: HNE_1382
Alternate gene names: 114798770
Gene position: 1413335-1412331 (Counterclockwise)
Preceding gene: 114799553
Following gene: 114798946
Centisome position: 38.15
GC content: 64.78
Gene sequence:
>1005_bases ATGGCCGAACTCTCAATTCTCGAACTCGGCCGTGTCCGCGAAGGCTTCACCCGCACCGACGCCCTCAACGAAGCCCGCCG CCTCGCCCAGCATGCCGAAAGCCTTGGCTACAAGCGCTTCTGGGTCGCCGAGCATCATAACATGCCCACCGTTACCACGG CGGCCACATCCCTCGTCATCAGCCATATTGCGGCCGGCACAAAGACCATCCGCGTCGGCGCCGGCGGCATCATGCTGCCC AATCACGCGCCCTATATCATCGCCGAACAGTTCGGCACGCTCGACGCGCTCTATCCCGGACGGATCGACCTGGGCCTCGG CCGCGCCCCCGGCACGGACCAGATGACCCTGCGCGCCCTGCGCGTGCATCCCGAGGAAGCCGAACGCTTCCCGCAGGATG TGGTGGAGCTGCAGATGTGGCTTGGTCCGGTCAATGAAGGCCAGCGCATCGAAGCCGTGCCCGGCTCCAATTCCAACGTC CCGATCTGGATTCTCGGCTCCAGCCTCTTCGGCGCCCAGCTCGCCGCAGAGCTTGGCCTGCCCTATGGCTTCGCCTCCCA CTTCGCCCCGCAGGCGCTCGATCAGGCCCTCTCCACCTATCGCTCGCGCTTCAAGCCGAACGAGAAGATGGCCAAGCCCT ATGCCCTCATTGGTGTGAACATCATCGCCGCCGAAACGGACGAGGAAGCCCGCTACCTCGCAACGTCCCAGCAGATGTCC TTCGCCAATCTCGTGCGCGGCCAGCGCAAACTGACCCAGCCGCCCATAGACGACATCGACACCTACTGGACCCCGCAGGA ACGCGCCCAGGCCTCCGCCATGCTGAACTTCAGCATCATCGGCGCCCACGACACCGTCCGCCGCGGCGTCGACGCGCTGC TGGAGCGGACCCATGCCGATGAGCTGATGATCGTGTCGGATATGTACGACCCCGAGAAGCGCCGCCGCTCGATCGAGATC ATTGCGGAAGTTCTCGGGAAGAAGGTTGCAGCGCCCGCTTACTGA
Upstream 100 bases:
>100_bases GGTGAGCTAAACCGGCCCTTTACCGCTGCCGCAGGTTGGCAAAAGGCGCCGCGTGCCCATCTAGGGAGGGCTGAAGCCAG CCCGATCAAAGGATAAAACC
Downstream 100 bases:
>100_bases GCGCTGCAAGCCTACCAGCAGACTAATAGTGCGGCGCTACATGCTATGCGCCCAACCGGGCAGCAGACCGAACGCGCCCA GCGCCATCCAGACCGCCATG
Product: luciferase family monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MAELSILELGRVREGFTRTDALNEARRLAQHAESLGYKRFWVAEHHNMPTVTTAATSLVISHIAAGTKTIRVGAGGIMLP NHAPYIIAEQFGTLDALYPGRIDLGLGRAPGTDQMTLRALRVHPEEAERFPQDVVELQMWLGPVNEGQRIEAVPGSNSNV PIWILGSSLFGAQLAAELGLPYGFASHFAPQALDQALSTYRSRFKPNEKMAKPYALIGVNIIAAETDEEARYLATSQQMS FANLVRGQRKLTQPPIDDIDTYWTPQERAQASAMLNFSIIGAHDTVRRGVDALLERTHADELMIVSDMYDPEKRRRSIEI IAEVLGKKVAAPAY
Sequences:
>Translated_334_residues MAELSILELGRVREGFTRTDALNEARRLAQHAESLGYKRFWVAEHHNMPTVTTAATSLVISHIAAGTKTIRVGAGGIMLP NHAPYIIAEQFGTLDALYPGRIDLGLGRAPGTDQMTLRALRVHPEEAERFPQDVVELQMWLGPVNEGQRIEAVPGSNSNV PIWILGSSLFGAQLAAELGLPYGFASHFAPQALDQALSTYRSRFKPNEKMAKPYALIGVNIIAAETDEEARYLATSQQMS FANLVRGQRKLTQPPIDDIDTYWTPQERAQASAMLNFSIIGAHDTVRRGVDALLERTHADELMIVSDMYDPEKRRRSIEI IAEVLGKKVAAPAY >Mature_333_residues AELSILELGRVREGFTRTDALNEARRLAQHAESLGYKRFWVAEHHNMPTVTTAATSLVISHIAAGTKTIRVGAGGIMLPN HAPYIIAEQFGTLDALYPGRIDLGLGRAPGTDQMTLRALRVHPEEAERFPQDVVELQMWLGPVNEGQRIEAVPGSNSNVP IWILGSSLFGAQLAAELGLPYGFASHFAPQALDQALSTYRSRFKPNEKMAKPYALIGVNIIAAETDEEARYLATSQQMSF ANLVRGQRKLTQPPIDDIDTYWTPQERAQASAMLNFSIIGAHDTVRRGVDALLERTHADELMIVSDMYDPEKRRRSIEII AEVLGKKVAAPAY
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]
Homologues:
Organism=Escherichia coli, GI1789551, Length=322, Percent_Identity=47.5155279503106, Blast_Score=328, Evalue=4e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR019949 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 36856; Mature: 36724
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELSILELGRVREGFTRTDALNEARRLAQHAESLGYKRFWVAEHHNMPTVTTAATSLVI CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHH SHIAAGTKTIRVGAGGIMLPNHAPYIIAEQFGTLDALYPGRIDLGLGRAPGTDQMTLRAL HHHHCCCEEEEECCCCEECCCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCHHHHHHH RVHPEEAERFPQDVVELQMWLGPVNEGQRIEAVPGSNSNVPIWILGSSLFGAQLAAELGL HCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHCC PYGFASHFAPQALDQALSTYRSRFKPNEKMAKPYALIGVNIIAAETDEEARYLATSQQMS CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHHH FANLVRGQRKLTQPPIDDIDTYWTPQERAQASAMLNFSIIGAHDTVRRGVDALLERTHAD HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHCCCC ELMIVSDMYDPEKRRRSIEIIAEVLGKKVAAPAY CEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AELSILELGRVREGFTRTDALNEARRLAQHAESLGYKRFWVAEHHNMPTVTTAATSLVI CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHH SHIAAGTKTIRVGAGGIMLPNHAPYIIAEQFGTLDALYPGRIDLGLGRAPGTDQMTLRAL HHHHCCCEEEEECCCCEECCCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCHHHHHHH RVHPEEAERFPQDVVELQMWLGPVNEGQRIEAVPGSNSNVPIWILGSSLFGAQLAAELGL HCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHCC PYGFASHFAPQALDQALSTYRSRFKPNEKMAKPYALIGVNIIAAETDEEARYLATSQQMS CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHHH FANLVRGQRKLTQPPIDDIDTYWTPQERAQASAMLNFSIIGAHDTVRRGVDALLERTHAD HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHCCCC ELMIVSDMYDPEKRRRSIEIIAEVLGKKVAAPAY CEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]