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The map label for this gene is ygaD [C]

Identifier: 114798747

GI number: 114798747

Start: 2251474

End: 2251959

Strand: Reverse

Name: ygaD [C]

Synonym: HNE_2165

Alternate gene names: 114798747

Gene position: 2251959-2251474 (Counterclockwise)

Preceding gene: 114799733

Following gene: 114799413

Centisome position: 60.78

GC content: 64.81

Gene sequence:

>486_bases
ATGCAGACTTTATTGCCTCTTGCCGCCGAGATTGGCGACATCCTGAAGGCGCGGCGGGAAACCGTCGCGATTTCAGAATC
TTCAGCAGGCGGGTTGATCTCCGCTGCGCTACTTGCCGCGCCGGGCGCGTCACGGTTTTATCGGGGCGGCGGGGTCATCT
ATACCCCGCAGGCCTTCCGCGGGCTTTTGGGCCTGACACGCGAAGCGTTGGGCGACAAACGTTCCTCGTCGGAACCCTAC
GCGCGCCTGCTGGCGCAGACGATCCGCACCAAGCTTGAGGCCGATTGGGGCCTCTGCGAAACAGGCGCCTCAGGGCCTAC
CGGCAATATGTATGGCGACGCGGCGGGGCACACATGTGTGGCGCTCGCTGGGCCGGGCGGCATTCTGGTCTCGCGCACGC
TGGAGACCGGCATTTCTGACCGGGAGGCGAACATGCGCCTGTTTGCAGCAGAGGCGCTGGACCTGCTGAGGGCAGGGCTG
GACTAA

Upstream 100 bases:

>100_bases
AGTGTCGGATGGCATGCCCGGCTTCTTCCCCTGGTGGGACGAGAAGGAATTCGAGTGGATCGGCAACAAGTGATTTCAGC
GGCAAAGGGGCAGTAGGGCC

Downstream 100 bases:

>100_bases
GCCTACTCCAGAATATCTTCCGTCATCCGCGATTTATCGAGGTCACCGAACCGTGTGACGTTCGCATCGAAGGCGAGCTT
CACGGTGCCGATCGGCCCGT

Product: CinA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MQTLLPLAAEIGDILKARRETVAISESSAGGLISAALLAAPGASRFYRGGGVIYTPQAFRGLLGLTREALGDKRSSSEPY
ARLLAQTIRTKLEADWGLCETGASGPTGNMYGDAAGHTCVALAGPGGILVSRTLETGISDREANMRLFAAEALDLLRAGL
D

Sequences:

>Translated_161_residues
MQTLLPLAAEIGDILKARRETVAISESSAGGLISAALLAAPGASRFYRGGGVIYTPQAFRGLLGLTREALGDKRSSSEPY
ARLLAQTIRTKLEADWGLCETGASGPTGNMYGDAAGHTCVALAGPGGILVSRTLETGISDREANMRLFAAEALDLLRAGL
D
>Mature_161_residues
MQTLLPLAAEIGDILKARRETVAISESSAGGLISAALLAAPGASRFYRGGGVIYTPQAFRGLLGLTREALGDKRSSSEPY
ARLLAQTIRTKLEADWGLCETGASGPTGNMYGDAAGHTCVALAGPGGILVSRTLETGISDREANMRLFAAEALDLLRAGL
D

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136
- InterPro:   IPR008135
- InterPro:   IPR001453 [H]

Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]

EC number: NA

Molecular weight: Translated: 16692; Mature: 16692

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLLPLAAEIGDILKARRETVAISESSAGGLISAALLAAPGASRFYRGGGVIYTPQAFR
CCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCHHEECCCCEEECHHHHH
GLLGLTREALGDKRSSSEPYARLLAQTIRTKLEADWGLCETGASGPTGNMYGDAAGHTCV
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEE
ALAGPGGILVSRTLETGISDREANMRLFAAEALDLLRAGLD
EEECCCCEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQTLLPLAAEIGDILKARRETVAISESSAGGLISAALLAAPGASRFYRGGGVIYTPQAFR
CCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCHHEECCCCEEECHHHHH
GLLGLTREALGDKRSSSEPYARLLAQTIRTKLEADWGLCETGASGPTGNMYGDAAGHTCV
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEE
ALAGPGGILVSRTLETGISDREANMRLFAAEALDLLRAGLD
EEECCCCEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA