| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798690
Identifier: 114798690
GI number: 114798690
Start: 1530923
End: 1531399
Strand: Direct
Name: 114798690
Synonym: HNE_1498
Alternate gene names: NA
Gene position: 1530923-1531399 (Clockwise)
Preceding gene: 114797869
Following gene: 114800470
Centisome position: 41.32
GC content: 63.31
Gene sequence:
>477_bases ATGACCAGAAATTTTGTCGTCGCCGCCGGCATTGGCGTGTTCATTCTGTCGGCCTGTCAGGCCACGGGCGTGAAAGCCGG CAGTGTCGATGTCGTGCCTCAGCTGGGGTCGGAAGTGGTTTTCTCGCCTCGTGTACTTGAGCGGGACGGTTACTGTCTGG CCGGCTTTGCGGTGACCTATCCGGAGGATGTCGCGCCGCACAAACGCCAGATCCGCGTCACGACCCGATGGTCGGGGGAT GTCGTCGACTATCCGCTGCCGATTCCGCCGCTCGGAGGGCCTGACCGTTACACGGAGAATGGCGATGGAACCGTCACCTT CAATGGCATGGTCACCGACAGCATCATGGCGTGCGATCCTGAACTGGCGGCGCGCACGCTGGCGATCGGTCCCTGTGTTG AAGGCGCGTGCGTGGCGGCCCGCTTCGTTGCGAACGCGCAGACCGCCGGGCTCGGGATCGACGAGGCTGAATACTGA
Upstream 100 bases:
>100_bases AAGCTTCCAGGCGACATGTACCAGAAACCCGAACCACAAGGGTGATCCTGCGTCGCCGCTTGGCAGATATCGAGAGTCCT GAAGAAAGGGGTTGGAAAGC
Downstream 100 bases:
>100_bases TGCCGACCGCACGTTTCACAGATTATCGGGCGACAGCTGTGCCCCCATTCGAGCGGAGGAATTCCATCATGGCCGACACT CCAGAACGGCGTCGCCGGGT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTRNFVVAAGIGVFILSACQATGVKAGSVDVVPQLGSEVVFSPRVLERDGYCLAGFAVTYPEDVAPHKRQIRVTTRWSGD VVDYPLPIPPLGGPDRYTENGDGTVTFNGMVTDSIMACDPELAARTLAIGPCVEGACVAARFVANAQTAGLGIDEAEY
Sequences:
>Translated_158_residues MTRNFVVAAGIGVFILSACQATGVKAGSVDVVPQLGSEVVFSPRVLERDGYCLAGFAVTYPEDVAPHKRQIRVTTRWSGD VVDYPLPIPPLGGPDRYTENGDGTVTFNGMVTDSIMACDPELAARTLAIGPCVEGACVAARFVANAQTAGLGIDEAEY >Mature_157_residues TRNFVVAAGIGVFILSACQATGVKAGSVDVVPQLGSEVVFSPRVLERDGYCLAGFAVTYPEDVAPHKRQIRVTTRWSGDV VDYPLPIPPLGGPDRYTENGDGTVTFNGMVTDSIMACDPELAARTLAIGPCVEGACVAARFVANAQTAGLGIDEAEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16581; Mature: 16450
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRNFVVAAGIGVFILSACQATGVKAGSVDVVPQLGSEVVFSPRVLERDGYCLAGFAVTY CCCCEEEECHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEECCEEECCCCEEEEEEEEEC PEDVAPHKRQIRVTTRWSGDVVDYPLPIPPLGGPDRYTENGDGTVTFNGMVTDSIMACDP CCCCCCCCEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCEEECCEEECCH ELAARTLAIGPCVEGACVAARFVANAQTAGLGIDEAEY HHHHHEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TRNFVVAAGIGVFILSACQATGVKAGSVDVVPQLGSEVVFSPRVLERDGYCLAGFAVTY CCCEEEECHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEECCEEECCCCEEEEEEEEEC PEDVAPHKRQIRVTTRWSGDVVDYPLPIPPLGGPDRYTENGDGTVTFNGMVTDSIMACDP CCCCCCCCEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCEEECCEEECCH ELAARTLAIGPCVEGACVAARFVANAQTAGLGIDEAEY HHHHHEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA