| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800470
Identifier: 114800470
GI number: 114800470
Start: 1531468
End: 1531932
Strand: Direct
Name: 114800470
Synonym: HNE_1499
Alternate gene names: NA
Gene position: 1531468-1531932 (Clockwise)
Preceding gene: 114798690
Following gene: 114799544
Centisome position: 41.33
GC content: 62.37
Gene sequence:
>465_bases ATGGCCGACACTCCAGAACGGCGTCGCCGGGTGCGATGCCTGGGAACCATTTCCCTCGCGGTCAGCATGCAAGCGCTGGT GGCCTGTGGTCAGGCGGAACCGGAAAGCGGCAAGTTCAGAGGGACACTGGACAGCGCAAGCTGCACAATCCTCGAGACCT TGCTGGAGGATATCGAGCGCGGTCTGGATGATGTCGCACAGGGCACGGGCAGCCGTCGGCCGACCTCGGGCGTCGCTGTC TATGCCAAGGAAGCGCGCGACATCGCTGCGGACGGAGCCCTGCCAACCGTCGTGGAAGATGCCTTGTTCGCGATCAGGGC AGAAGCATCATCCAAGTACTTCTTTGCAGAGGGGGCAGCTGTGTTTCTGGAGCAGGGTCTGATCATCGAGGAGGCCATGC CGAAAGTGTGCCGGGGAAGTGCCACACCGGGGCTCGGACGGTTTTCCGGAACCTTTGGCGAATGA
Upstream 100 bases:
>100_bases CCGGGCTCGGGATCGACGAGGCTGAATACTGATGCCGACCGCACGTTTCACAGATTATCGGGCGACAGCTGTGCCCCCAT TCGAGCGGAGGAATTCCATC
Downstream 100 bases:
>100_bases TGGGGTGGCGTATCATGATGAGCTTGCGAAAAGTGCGGGGCGGTCTTCGTAACTCGGGACTGATCTTCCTGGCCGGAAGC GCATTGTCTCTCGCTGCGGC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MADTPERRRRVRCLGTISLAVSMQALVACGQAEPESGKFRGTLDSASCTILETLLEDIERGLDDVAQGTGSRRPTSGVAV YAKEARDIAADGALPTVVEDALFAIRAEASSKYFFAEGAAVFLEQGLIIEEAMPKVCRGSATPGLGRFSGTFGE
Sequences:
>Translated_154_residues MADTPERRRRVRCLGTISLAVSMQALVACGQAEPESGKFRGTLDSASCTILETLLEDIERGLDDVAQGTGSRRPTSGVAV YAKEARDIAADGALPTVVEDALFAIRAEASSKYFFAEGAAVFLEQGLIIEEAMPKVCRGSATPGLGRFSGTFGE >Mature_153_residues ADTPERRRRVRCLGTISLAVSMQALVACGQAEPESGKFRGTLDSASCTILETLLEDIERGLDDVAQGTGSRRPTSGVAVY AKEARDIAADGALPTVVEDALFAIRAEASSKYFFAEGAAVFLEQGLIIEEAMPKVCRGSATPGLGRFSGTFGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16248; Mature: 16116
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTPERRRRVRCLGTISLAVSMQALVACGQAEPESGKFRGTLDSASCTILETLLEDIER CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHH GLDDVAQGTGSRRPTSGVAVYAKEARDIAADGALPTVVEDALFAIRAEASSKYFFAEGAA HHHHHHHCCCCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCHH VFLEQGLIIEEAMPKVCRGSATPGLGRFSGTFGE HHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure ADTPERRRRVRCLGTISLAVSMQALVACGQAEPESGKFRGTLDSASCTILETLLEDIER CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHH GLDDVAQGTGSRRPTSGVAVYAKEARDIAADGALPTVVEDALFAIRAEASSKYFFAEGAA HHHHHHHCCCCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCHH VFLEQGLIIEEAMPKVCRGSATPGLGRFSGTFGE HHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA