| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is sdiA [C]
Identifier: 114798675
GI number: 114798675
Start: 1477320
End: 1477733
Strand: Direct
Name: sdiA [C]
Synonym: HNE_1449
Alternate gene names: 114798675
Gene position: 1477320-1477733 (Clockwise)
Preceding gene: 114798901
Following gene: 114797125
Centisome position: 39.87
GC content: 57.49
Gene sequence:
>414_bases ATGGCAACATCTGTCGCGTTCATGATGGAGCACGGGATTGCAGCAGGAATATCCGTAATGGTCCCGCGACTGAACGGGGA TTACGGCTCGCTGATCTGTATATATGACCGGGACAATGCGCATCTCGCCAGTGAGGTGGCCGCGCGGCGGGCCCCGGATC TGCTATTTCTGGCCAGCAGCGTTGTTTGCGCCCTCGAGCATCTGGCAGAGGGCGCGCGTCCCGCGGAACTTTCACCCCAG CAGGTAACGTGTCTGCGCTGGGTTAAAGCGGGTAAAACAGATCAGGAGATTGCGGAAATCATTCTCTGTTCCGTCAATAC GGTTCGGTATCATATCAAGACGGCCCTGAAAGATCTCGGCGCTTCCAACCGGACGCACGCGGTGGTTTTGGCGATCGAGC ATCGCCTGATCTGA
Upstream 100 bases:
>100_bases GTGACCTGGACGAAGGTCCAGAGCTCTGCGTCGCCCCGGCCCACAGCGGCGCAGATCACCGCGATCGCAATCGGCTCGCC ATCCTTCGGCGTGATGACCC
Downstream 100 bases:
>100_bases TGTCTCGGGAATCGTAAACGGGCGCGAAGGTGTACGATCCGTAAAATCCGACCGCGTGGCAGAATGGCGGGAAGATCATT ATACAGACCTTATATGTCCC
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MATSVAFMMEHGIAAGISVMVPRLNGDYGSLICIYDRDNAHLASEVAARRAPDLLFLASSVVCALEHLAEGARPAELSPQ QVTCLRWVKAGKTDQEIAEIILCSVNTVRYHIKTALKDLGASNRTHAVVLAIEHRLI
Sequences:
>Translated_137_residues MATSVAFMMEHGIAAGISVMVPRLNGDYGSLICIYDRDNAHLASEVAARRAPDLLFLASSVVCALEHLAEGARPAELSPQ QVTCLRWVKAGKTDQEIAEIILCSVNTVRYHIKTALKDLGASNRTHAVVLAIEHRLI >Mature_136_residues ATSVAFMMEHGIAAGISVMVPRLNGDYGSLICIYDRDNAHLASEVAARRAPDLLFLASSVVCALEHLAEGARPAELSPQQ VTCLRWVKAGKTDQEIAEIILCSVNTVRYHIKTALKDLGASNRTHAVVLAIEHRLI
Specific function: Activates Cell Division By Specifically Increasing Transcription From One Of The Two Promoters That Lie Immediately Upstream Of The Ftsqaz Gene Cluster. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14849; Mature: 14718
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSVAFMMEHGIAAGISVMVPRLNGDYGSLICIYDRDNAHLASEVAARRAPDLLFLASS CCCHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHH VVCALEHLAEGARPAELSPQQVTCLRWVKAGKTDQEIAEIILCSVNTVRYHIKTALKDLG HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCC ASNRTHAVVLAIEHRLI CCCCCEEEEEEECCCCC >Mature Secondary Structure ATSVAFMMEHGIAAGISVMVPRLNGDYGSLICIYDRDNAHLASEVAARRAPDLLFLASS CCHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHH VVCALEHLAEGARPAELSPQQVTCLRWVKAGKTDQEIAEIILCSVNTVRYHIKTALKDLG HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCC ASNRTHAVVLAIEHRLI CCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA