| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798659
Identifier: 114798659
GI number: 114798659
Start: 2675711
End: 2676625
Strand: Direct
Name: 114798659
Synonym: HNE_2531
Alternate gene names: NA
Gene position: 2675711-2676625 (Clockwise)
Preceding gene: 114798149
Following gene: 114798188
Centisome position: 72.22
GC content: 55.63
Gene sequence:
>915_bases ATGACCGGCCCTTTCGATCACAAAGCCAAAGTCTTCGCCGCTTTCGAGCAGGACTGTATCACGCTTCCTATTCTCTCCAT TCTTCCGCTACGCACGCTGCCGGCAACCCTCAAGCTCAGCCAGAAATATCGCCAGATTCTGGCATCTATAAAAGAAGTGG GGCTCGTTGAGCCACCCGTCGTGGCGCGTAGCCCAAAGCAACGGGACACTTACTTGCTGGTGGATGGCCATGTTCGGCTC GAAGCCTTGAAGGATCTCGGTGTCAAAGAAGTCGAGTGCCTGGTTGCAACCGATGACGAAGCCTTCACCTATAACAAACG GATCAGCCGCCTCTCTCCTGTCCAGGAACACCGCATGATCCGGAAAGCGATCGATCGCGGCGTCCCAGAAGAAAAGATCG CCAAAGCGCTAGACCTTCAGCCCATGAGTGTCCGGCGCAAGGTTCGCTTGCTGGATGGAATTTGTGACGAGGCGGTCGCC ATCCTCAAAGATAAACCCTGCCCCATGGCGCTCTTTGAAATCCTCCGGAAAATGAAATCGCTCCGGCAGATCGAAGCGGC CGAACTTCTCGTCAATGCGAACAACTATACCGTCGCCTACGCCTCTGCCATCCTAGCCGGCACGCCGCAGTCTCAACTCG TCGATGGTGCCAAGGCCAAACGGGTCATGAGCGTCACGCCTGAAACCATGGCCCGTATGGAGCGGGAGCTGACGAGGCTG CAAGAATCCATCACCTCCATTCAGGAGTCTTACGGCAAAGACCACCTGCAGCTGACCGTCATCAAGGGGTACATCTCGAA GCTCCTCGGAAATCCTCGGATTGTCCGTTATCTGATGCAGTATCGGCCGGAGTTCTTGAGTGAGTTTCAAGCGATCGCTG AAATGGCTTCGACGATGCCGGCTGAGCCTGTTTGA
Upstream 100 bases:
>100_bases CCCTGAAAAGAGATGAAGCCTTTTTGAACCTGCTGCGCGCCGAAGGGCTTGGCTCATTGCCGCAATATCTTGAAGACAGC CTGACCGCTGGAGGAACGTC
Downstream 100 bases:
>100_bases TGTCGTCATTTAAAGGTCAAGTTGGGGATAATGACTTCCCACGCGTCTCTCTGCAAAGGATGCAGCCATTCTGGAGAAAC ATCACCCTTCGTTCGCGAAA
Product: ParB family protein
Products: NA
Alternate protein names: ParB-Like Nuclease; Plasmid Partitioning Protein; RepB Plasmid Partitioning Protein; Transcriptional Regulator; ParB Family Protein; Repb Plasmid Partition
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MTGPFDHKAKVFAAFEQDCITLPILSILPLRTLPATLKLSQKYRQILASIKEVGLVEPPVVARSPKQRDTYLLVDGHVRL EALKDLGVKEVECLVATDDEAFTYNKRISRLSPVQEHRMIRKAIDRGVPEEKIAKALDLQPMSVRRKVRLLDGICDEAVA ILKDKPCPMALFEILRKMKSLRQIEAAELLVNANNYTVAYASAILAGTPQSQLVDGAKAKRVMSVTPETMARMERELTRL QESITSIQESYGKDHLQLTVIKGYISKLLGNPRIVRYLMQYRPEFLSEFQAIAEMASTMPAEPV
Sequences:
>Translated_304_residues MTGPFDHKAKVFAAFEQDCITLPILSILPLRTLPATLKLSQKYRQILASIKEVGLVEPPVVARSPKQRDTYLLVDGHVRL EALKDLGVKEVECLVATDDEAFTYNKRISRLSPVQEHRMIRKAIDRGVPEEKIAKALDLQPMSVRRKVRLLDGICDEAVA ILKDKPCPMALFEILRKMKSLRQIEAAELLVNANNYTVAYASAILAGTPQSQLVDGAKAKRVMSVTPETMARMERELTRL QESITSIQESYGKDHLQLTVIKGYISKLLGNPRIVRYLMQYRPEFLSEFQAIAEMASTMPAEPV >Mature_303_residues TGPFDHKAKVFAAFEQDCITLPILSILPLRTLPATLKLSQKYRQILASIKEVGLVEPPVVARSPKQRDTYLLVDGHVRLE ALKDLGVKEVECLVATDDEAFTYNKRISRLSPVQEHRMIRKAIDRGVPEEKIAKALDLQPMSVRRKVRLLDGICDEAVAI LKDKPCPMALFEILRKMKSLRQIEAAELLVNANNYTVAYASAILAGTPQSQLVDGAKAKRVMSVTPETMARMERELTRLQ ESITSIQESYGKDHLQLTVIKGYISKLLGNPRIVRYLMQYRPEFLSEFQAIAEMASTMPAEPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34174; Mature: 34042
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPFDHKAKVFAAFEQDCITLPILSILPLRTLPATLKLSQKYRQILASIKEVGLVEPPV CCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCC VARSPKQRDTYLLVDGHVRLEALKDLGVKEVECLVATDDEAFTYNKRISRLSPVQEHRMI CCCCCCCCCCEEEEECCHHHHHHHHCCHHHEEEEEECCCCHHHHHHHHHHCCHHHHHHHH RKAIDRGVPEEKIAKALDLQPMSVRRKVRLLDGICDEAVAILKDKPCPMALFEILRKMKS HHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LRQIEAAELLVNANNYTVAYASAILAGTPQSQLVDGAKAKRVMSVTPETMARMERELTRL HHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHH QESITSIQESYGKDHLQLTVIKGYISKLLGNPRIVRYLMQYRPEFLSEFQAIAEMASTMP HHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCC AEPV CCCC >Mature Secondary Structure TGPFDHKAKVFAAFEQDCITLPILSILPLRTLPATLKLSQKYRQILASIKEVGLVEPPV CCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCC VARSPKQRDTYLLVDGHVRLEALKDLGVKEVECLVATDDEAFTYNKRISRLSPVQEHRMI CCCCCCCCCCEEEEECCHHHHHHHHCCHHHEEEEEECCCCHHHHHHHHHHCCHHHHHHHH RKAIDRGVPEEKIAKALDLQPMSVRRKVRLLDGICDEAVAILKDKPCPMALFEILRKMKS HHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LRQIEAAELLVNANNYTVAYASAILAGTPQSQLVDGAKAKRVMSVTPETMARMERELTRL HHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHH QESITSIQESYGKDHLQLTVIKGYISKLLGNPRIVRYLMQYRPEFLSEFQAIAEMASTMP HHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCC AEPV CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA