| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114798149
Identifier: 114798149
GI number: 114798149
Start: 2674803
End: 2675714
Strand: Direct
Name: 114798149
Synonym: HNE_2530
Alternate gene names: NA
Gene position: 2674803-2675714 (Clockwise)
Preceding gene: 114797437
Following gene: 114798659
Centisome position: 72.19
GC content: 57.46
Gene sequence:
>912_bases ATGATCGACGACGAATATATAGAGAGCGCGCCAAACCAGGTGACGGTAATCCCCATCGACCGCATTCGGATCCTCAATCC CCGTGTTCGCAACAGGCGCAACTTTGCCGAGATGGTCGAGAGCATTGCCAAGGTAGGGTTAAAGCGCCCCATCACCGTCG CAGTCCGCAAGAATACCGATCCTGCCGAATACGATCTGGTCTGTGGCCAGGGCAGATTAGAAGCCTTTGTTGAGCTCGGG CAGTCAGAGATCCCAGCCGTCATCATTGAGGCTGATGAAAGCGACTGCCTCGTCATGAGCCTGGTTGAGAACTGCGCTCG CCGACAGCACCGGGCGATCGATCTCATGCAGGAGATCGGGTCCCTCAGGAACCGCGGCTACACTGATCGTCAGATCGCGG GCAAAATTGGTGTTACGGCGGAATATGTCAGCATGATTGCCGGACTTCTGGAACGCGGCGAGGAGCGCCTCGTCGCAGCG GTGGAGACAGGGCTCATCCCACTCAATCTCGCCATCGATATCTCTAAGACCGATGATGAAGGCGCCCAGCGCGCGCTGAC AGAAGTCTATATGGAAAAGAAGCTCCGGGGGAAAAAGCTCTCCGCCGTTTTGAAGCTGCTCCAGCAACGCCAACGGCGCG GCCCACATATCAGGTCGTCGCCCGCCGGCCGAACCGGAGCGAAGCGTCCCCTGACGAGCGACGCTTTGGTCCGGGCATAT CGACAAGAGGCAGACAGGCAGAAGCTGATCATCAAGAAGGCCGAAGTTACGCAAGGCAAGCTGCTGTTCGTCATCGAAGC GTTTCGGTCCCTGAAAAGAGATGAAGCCTTTTTGAACCTGCTGCGCGCCGAAGGGCTTGGCTCATTGCCGCAATATCTTG AAGACAGCCTGACCGCTGGAGGAACGTCATGA
Upstream 100 bases:
>100_bases GCTTGAGCGAGCAGAACGGCCTTGGGCTCGATGCCTATCGGTTCGACACCCTCGACTATCTCTTTCTCATGTCCCGAAGG GCTCAGCTTGTGGAGGCGTT
Downstream 100 bases:
>100_bases CCGGCCCTTTCGATCACAAAGCCAAAGTCTTCGCCGCTTTCGAGCAGGACTGTATCACGCTTCCTATTCTCTCCATTCTT CCGCTACGCACGCTGCCGGC
Product: ParB family protein
Products: NA
Alternate protein names: Partitioning Protein; ParB-Like Partition Protein; RepB Plasmid Partition; Nuclease; Stage 0 Sporulation Protein J; ParB-Like Partioning Protein; Partitioning Protein ParB; Parb-Like Nuclease Protein; Transcriptional Regulator; Parb-Like Partition Protein; ParB-Like Protein; Chromosome Partitionning Protein ParB; Plasmid Partitioning Protein; ParB Domain Protein Nuclease
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MIDDEYIESAPNQVTVIPIDRIRILNPRVRNRRNFAEMVESIAKVGLKRPITVAVRKNTDPAEYDLVCGQGRLEAFVELG QSEIPAVIIEADESDCLVMSLVENCARRQHRAIDLMQEIGSLRNRGYTDRQIAGKIGVTAEYVSMIAGLLERGEERLVAA VETGLIPLNLAIDISKTDDEGAQRALTEVYMEKKLRGKKLSAVLKLLQQRQRRGPHIRSSPAGRTGAKRPLTSDALVRAY RQEADRQKLIIKKAEVTQGKLLFVIEAFRSLKRDEAFLNLLRAEGLGSLPQYLEDSLTAGGTS
Sequences:
>Translated_303_residues MIDDEYIESAPNQVTVIPIDRIRILNPRVRNRRNFAEMVESIAKVGLKRPITVAVRKNTDPAEYDLVCGQGRLEAFVELG QSEIPAVIIEADESDCLVMSLVENCARRQHRAIDLMQEIGSLRNRGYTDRQIAGKIGVTAEYVSMIAGLLERGEERLVAA VETGLIPLNLAIDISKTDDEGAQRALTEVYMEKKLRGKKLSAVLKLLQQRQRRGPHIRSSPAGRTGAKRPLTSDALVRAY RQEADRQKLIIKKAEVTQGKLLFVIEAFRSLKRDEAFLNLLRAEGLGSLPQYLEDSLTAGGTS >Mature_303_residues MIDDEYIESAPNQVTVIPIDRIRILNPRVRNRRNFAEMVESIAKVGLKRPITVAVRKNTDPAEYDLVCGQGRLEAFVELG QSEIPAVIIEADESDCLVMSLVENCARRQHRAIDLMQEIGSLRNRGYTDRQIAGKIGVTAEYVSMIAGLLERGEERLVAA VETGLIPLNLAIDISKTDDEGAQRALTEVYMEKKLRGKKLSAVLKLLQQRQRRGPHIRSSPAGRTGAKRPLTSDALVRAY RQEADRQKLIIKKAEVTQGKLLFVIEAFRSLKRDEAFLNLLRAEGLGSLPQYLEDSLTAGGTS
Specific function: Unknown
COG id: COG1475
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33746; Mature: 33746
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDDEYIESAPNQVTVIPIDRIRILNPRVRNRRNFAEMVESIAKVGLKRPITVAVRKNTD CCCCHHHHCCCCEEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC PAEYDLVCGQGRLEAFVELGQSEIPAVIIEADESDCLVMSLVENCARRQHRAIDLMQEIG CCCEEEEECCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SLRNRGYTDRQIAGKIGVTAEYVSMIAGLLERGEERLVAAVETGLIPLNLAIDISKTDDE HHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHCCEEEEEEEEECCCCCH GAQRALTEVYMEKKLRGKKLSAVLKLLQQRQRRGPHIRSSPAGRTGAKRPLTSDALVRAY HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH RQEADRQKLIIKKAEVTQGKLLFVIEAFRSLKRDEAFLNLLRAEGLGSLPQYLEDSLTAG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC GTS CCC >Mature Secondary Structure MIDDEYIESAPNQVTVIPIDRIRILNPRVRNRRNFAEMVESIAKVGLKRPITVAVRKNTD CCCCHHHHCCCCEEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC PAEYDLVCGQGRLEAFVELGQSEIPAVIIEADESDCLVMSLVENCARRQHRAIDLMQEIG CCCEEEEECCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SLRNRGYTDRQIAGKIGVTAEYVSMIAGLLERGEERLVAAVETGLIPLNLAIDISKTDDE HHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHCCEEEEEEEEECCCCCH GAQRALTEVYMEKKLRGKKLSAVLKLLQQRQRRGPHIRSSPAGRTGAKRPLTSDALVRAY HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH RQEADRQKLIIKKAEVTQGKLLFVIEAFRSLKRDEAFLNLLRAEGLGSLPQYLEDSLTAG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC GTS CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA