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The map label for this gene is yvrB [H]

Identifier: 114798623

GI number: 114798623

Start: 1156152

End: 1157135

Strand: Direct

Name: yvrB [H]

Synonym: HNE_1144

Alternate gene names: 114798623

Gene position: 1156152-1157135 (Clockwise)

Preceding gene: 114799155

Following gene: 114797669

Centisome position: 31.21

GC content: 67.28

Gene sequence:

>984_bases
ATGAGCCGCCTGACGCTCATCCTGGCGCTTGTGGCGGCGCTTCTGTTTGCGATTTCGGCGCTGGTGGGCACGGCGCCGCT
GGCTTTGGGCGATACATTCGCGGCGCTGACCGGGCAGGGTGACGAGCGGGTGCGCATTATTATCTGGGAGCTGCGCCTGC
CGCGCGCGGTCGCCGCTTTTGCCGTGGGCGCGGCGCTTGGCCTTGCCGGTGCGGCGCTTCAGGGATTGTTGCAGAACCCG
CTGGCGGAGCCCGGCGTGCTGGGGGTGTCGGCCTTCTCGGCGCTCGGCGCGGTGATCGCGATCTTCTTTGGTTTTGCAGC
GGTGAACAGTTTTGCGGTGCCGCTGGCGGCGATCCTTGGGGCCGGGATTGCGACCCTGCTGCTGGTGTTTGCGGCGATGC
GGGGGGCGCGCAGTGTGACACTGCTGCTGATCGGCATTGGCCTGTCGAGCTTCGCCGGGGCGCTGATGTCGCTGGCCCTC
AACATGGCGCCTAATCCCTACAGCCTGGCCGATCTTGTGAACTGGATGATGGGATCGGTGGCCAACCGGTCCTGGGCGGA
CATCCTTCTGGGCGCGCCGGGCTGGATCATCGGAGCAGCGCTTGTGTTTCTGGCGGGGCCGGGCCTGCGGGCGCTGAGCC
TTGGGGATGAGACGGCGACGAGTCTCGGCGCCGATCCGCGCCGCATTCGCCTCCTGGTGATCGGGGGCACGTCGCTGCTG
GCAGGTGCCAGCGTGGCGACGGCTGGCACCATCGGCTTTGTTGGAATCGTTGCGCCGCACATCATCCGCCCTTTCGTGCG
GCATGATCCACAGCGGTTGCTGATCCCGTCGGCGCTGCTGGCCGGGATCATCCTGATGGTGGCTGACATTGCGATCCGCG
TTCTGCCCTTCCAGCAGGAACTCAAGCTGGGCGTTGCGGCGGCGCTGGTGGGCGGGCCGGTATTTATCTGGATCGCGACC
CGGCTGGGGAGGGCGTCGTCATGA

Upstream 100 bases:

>100_bases
AGGCGCAGGTGATCGATATGGACGAGTCGCGGGTTTCCTGCGGGGCATGGTTTGTGGCCGATGAAGCGGCCGATATTGCC
GGTGCGCTGGAGCCGGCGCG

Downstream 100 bases:

>100_bases
TTTCGGCTGAACATCTGACCGTGGCCCTGAATGGCCGGGATGTGGCGCGGGATGTCTCCTTCTGGCTGCGTGATGGCGAG
TTGGCAGCGCTGGTTGGCCC

Product: iron compound ABC transporter permease

Products: ADP; phosphate; cob(I)alamin [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MSRLTLILALVAALLFAISALVGTAPLALGDTFAALTGQGDERVRIIIWELRLPRAVAAFAVGAALGLAGAALQGLLQNP
LAEPGVLGVSAFSALGAVIAIFFGFAAVNSFAVPLAAILGAGIATLLLVFAAMRGARSVTLLLIGIGLSSFAGALMSLAL
NMAPNPYSLADLVNWMMGSVANRSWADILLGAPGWIIGAALVFLAGPGLRALSLGDETATSLGADPRRIRLLVIGGTSLL
AGASVATAGTIGFVGIVAPHIIRPFVRHDPQRLLIPSALLAGIILMVADIAIRVLPFQQELKLGVAAALVGGPVFIWIAT
RLGRASS

Sequences:

>Translated_327_residues
MSRLTLILALVAALLFAISALVGTAPLALGDTFAALTGQGDERVRIIIWELRLPRAVAAFAVGAALGLAGAALQGLLQNP
LAEPGVLGVSAFSALGAVIAIFFGFAAVNSFAVPLAAILGAGIATLLLVFAAMRGARSVTLLLIGIGLSSFAGALMSLAL
NMAPNPYSLADLVNWMMGSVANRSWADILLGAPGWIIGAALVFLAGPGLRALSLGDETATSLGADPRRIRLLVIGGTSLL
AGASVATAGTIGFVGIVAPHIIRPFVRHDPQRLLIPSALLAGIILMVADIAIRVLPFQQELKLGVAAALVGGPVFIWIAT
RLGRASS
>Mature_326_residues
SRLTLILALVAALLFAISALVGTAPLALGDTFAALTGQGDERVRIIIWELRLPRAVAAFAVGAALGLAGAALQGLLQNPL
AEPGVLGVSAFSALGAVIAIFFGFAAVNSFAVPLAAILGAGIATLLLVFAAMRGARSVTLLLIGIGLSSFAGALMSLALN
MAPNPYSLADLVNWMMGSVANRSWADILLGAPGWIIGAALVFLAGPGLRALSLGDETATSLGADPRRIRLLVIGGTSLLA
GASVATAGTIGFVGIVAPHIIRPFVRHDPQRLLIPSALLAGIILMVADIAIRVLPFQQELKLGVAAALVGGPVFIWIATR
LGRASS

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788004, Length=307, Percent_Identity=35.8306188925081, Blast_Score=138, Evalue=5e-34,
Organism=Escherichia coli, GI1790741, Length=314, Percent_Identity=32.8025477707006, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1790740, Length=283, Percent_Identity=32.8621908127208, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1786804, Length=247, Percent_Identity=36.4372469635627, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1786805, Length=311, Percent_Identity=33.4405144694534, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1786347, Length=276, Percent_Identity=31.8840579710145, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 33211; Mature: 33080

Theoretical pI: Translated: 11.82; Mature: 11.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLTLILALVAALLFAISALVGTAPLALGDTFAALTGQGDERVRIIIWELRLPRAVAAF
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCCCCCEEEEEEEEECCHHHHHHH
AVGAALGLAGAALQGLLQNPLAEPGVLGVSAFSALGAVIAIFFGFAAVNSFAVPLAAILG
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGIATLLLVFAAMRGARSVTLLLIGIGLSSFAGALMSLALNMAPNPYSLADLVNWMMGSV
HHHHHHHHHHHHHCCCCCEEHHEEHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ANRSWADILLGAPGWIIGAALVFLAGPGLRALSLGDETATSLGADPRRIRLLVIGGTSLL
CCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHCCCCCCEEEEEEEECCHHH
AGASVATAGTIGFVGIVAPHIIRPFVRHDPQRLLIPSALLAGIILMVADIAIRVLPFQQE
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LKLGVAAALVGGPVFIWIATRLGRASS
HHHHHHHHHHCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SRLTLILALVAALLFAISALVGTAPLALGDTFAALTGQGDERVRIIIWELRLPRAVAAF
CHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCCCCCEEEEEEEEECCHHHHHHH
AVGAALGLAGAALQGLLQNPLAEPGVLGVSAFSALGAVIAIFFGFAAVNSFAVPLAAILG
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGIATLLLVFAAMRGARSVTLLLIGIGLSSFAGALMSLALNMAPNPYSLADLVNWMMGSV
HHHHHHHHHHHHHCCCCCEEHHEEHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ANRSWADILLGAPGWIIGAALVFLAGPGLRALSLGDETATSLGADPRRIRLLVIGGTSLL
CCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHCCCCCCEEEEEEEECCHHH
AGASVATAGTIGFVGIVAPHIIRPFVRHDPQRLLIPSALLAGIILMVADIAIRVLPFQQE
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LKLGVAAALVGGPVFIWIATRLGRASS
HHHHHHHHHHCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; cob(I)alamin [Periplasm]; H2O [C]

Specific reaction: ATP + cob(I)alamin [Periplasm] + H2O = ADP + phosphate + cob(I)alamin [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]