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The map label for this gene is 114798617

Identifier: 114798617

GI number: 114798617

Start: 1971365

End: 1972438

Strand: Reverse

Name: 114798617

Synonym: HNE_1903

Alternate gene names: NA

Gene position: 1972438-1971365 (Counterclockwise)

Preceding gene: 114797555

Following gene: 114798609

Centisome position: 53.24

GC content: 62.01

Gene sequence:

>1074_bases
GTGGCAGAGCGTTTCGAGCAGCGCGGACGCGGCGCGGTCTCGAACCAGACCGGGCGGTATGAGCGGGAAACCCGCGCCGC
CTTTGATGATGGCTGGGATACGATCGAGAACGGGGCAGAGCGCCTCGACACGCAGGTGTTCGATGAGGTCGCCCGCACGA
TCATCACCTTCAACAAATCTCCCGACATCTCCTTTGACCGGACGGTGAACCCTTACCGGGGGTGTGAACATGGCTGCATC
TATTGTTTCGCGCGGCCGACGCATGCCTGGTCCGGGCTGTCGGCTGGGCTCGACTTTGAAAGCAAGCTGTTCCGCAAGAC
GAACGCAACCGAGCTTCTGGTGCGGGAGCTGTCGCGTCCCGGCTATGTCGTCCGGCCCATCGCACTGGGGATGAATACCG
ATGCCTATCAGCCGATCGAGCGCGAACAGCGCCTGACACGCCAGCTGCTGGAAATTCTCTCCGCACATAACCACCCCGTC
AGCCTGCTGACAAAATCAGCGCTTATCCAGCGCGACATTGACATCCTCGCACCGATGGCCGCGATGGGTCTGACGCGTGT
GGGCGTGTCGATCACAACGCTCGACCGCAAGCTTGCCCGCAAGATGGAACCGCGCGCGGCAACGCCGGAGCGTCGGCTGG
AAACGGTGAGAGCGCTTTCCGAAGCCGGTATTCCAGTCATGGTGATGACGGCGCCGATCATTCCCGGTCTCAACGATCAT
GAGATCGAGGCCCTGATCCAGGCAGCCGCAGAAAATGGCGCACGTGGGGTTGGCTATGTGGTTCTCAGGCTGCCTTTCGA
GATCAAGGATCTCTTCCATGAATGGCTGGTACAGCATGCGCCGGACCGGGCCGCGCGCGTTATCAATACCCTGCGCGAGA
TGCGCGGCGGTCAGGATTACGATGCCAAATGGTTCGAACGCGGAACAGGCAAGGGGCCGGTCGCAGACCTTATCCGGGCC
CGCTTCATCCGCGCCGCCACCCGGCTTAACCTGAACCTGCCGAGAGAACCTCTGAGAACGGATCTTTTCCGCCCGCCCGG
CGCGCCGTCGGCTCAGCTCAGCCTGAATTTCTAG

Upstream 100 bases:

>100_bases
GTTCTTGCTTTGTTCTTGTTTCTCTGTCTTTCTCCCAGACATGCGCACGGGACAGAAACTGAAGAAATCAGGACGGGTCA
CGCTTCTCGATACGGCGAGC

Downstream 100 bases:

>100_bases
GTTTGGGCCACCGGCGTATTTTCGACCCGGCCTGAGGCAACAGGCGCCCAGGGGCAGAGGCGGCGTTCGGCCTTGAGGGC
GGCTTCGGCCAGCCGCCGCA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MAERFEQRGRGAVSNQTGRYERETRAAFDDGWDTIENGAERLDTQVFDEVARTIITFNKSPDISFDRTVNPYRGCEHGCI
YCFARPTHAWSGLSAGLDFESKLFRKTNATELLVRELSRPGYVVRPIALGMNTDAYQPIEREQRLTRQLLEILSAHNHPV
SLLTKSALIQRDIDILAPMAAMGLTRVGVSITTLDRKLARKMEPRAATPERRLETVRALSEAGIPVMVMTAPIIPGLNDH
EIEALIQAAAENGARGVGYVVLRLPFEIKDLFHEWLVQHAPDRAARVINTLREMRGGQDYDAKWFERGTGKGPVADLIRA
RFIRAATRLNLNLPREPLRTDLFRPPGAPSAQLSLNF

Sequences:

>Translated_357_residues
MAERFEQRGRGAVSNQTGRYERETRAAFDDGWDTIENGAERLDTQVFDEVARTIITFNKSPDISFDRTVNPYRGCEHGCI
YCFARPTHAWSGLSAGLDFESKLFRKTNATELLVRELSRPGYVVRPIALGMNTDAYQPIEREQRLTRQLLEILSAHNHPV
SLLTKSALIQRDIDILAPMAAMGLTRVGVSITTLDRKLARKMEPRAATPERRLETVRALSEAGIPVMVMTAPIIPGLNDH
EIEALIQAAAENGARGVGYVVLRLPFEIKDLFHEWLVQHAPDRAARVINTLREMRGGQDYDAKWFERGTGKGPVADLIRA
RFIRAATRLNLNLPREPLRTDLFRPPGAPSAQLSLNF
>Mature_356_residues
AERFEQRGRGAVSNQTGRYERETRAAFDDGWDTIENGAERLDTQVFDEVARTIITFNKSPDISFDRTVNPYRGCEHGCIY
CFARPTHAWSGLSAGLDFESKLFRKTNATELLVRELSRPGYVVRPIALGMNTDAYQPIEREQRLTRQLLEILSAHNHPVS
LLTKSALIQRDIDILAPMAAMGLTRVGVSITTLDRKLARKMEPRAATPERRLETVRALSEAGIPVMVMTAPIIPGLNDHE
IEALIQAAAENGARGVGYVVLRLPFEIKDLFHEWLVQHAPDRAARVINTLREMRGGQDYDAKWFERGTGKGPVADLIRAR
FIRAATRLNLNLPREPLRTDLFRPPGAPSAQLSLNF

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 40110; Mature: 39979

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERFEQRGRGAVSNQTGRYERETRAAFDDGWDTIENGAERLDTQVFDEVARTIITFNKS
CCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDISFDRTVNPYRGCEHGCIYCFARPTHAWSGLSAGLDFESKLFRKTNATELLVRELSRP
CCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHCCC
GYVVRPIALGMNTDAYQPIEREQRLTRQLLEILSAHNHPVSLLTKSALIQRDIDILAPMA
CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
AMGLTRVGVSITTLDRKLARKMEPRAATPERRLETVRALSEAGIPVMVMTAPIIPGLNDH
HHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHH
EIEALIQAAAENGARGVGYVVLRLPFEIKDLFHEWLVQHAPDRAARVINTLREMRGGQDY
HHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
DAKWFERGTGKGPVADLIRARFIRAATRLNLNLPREPLRTDLFRPPGAPSAQLSLNF
CHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCEEECC
>Mature Secondary Structure 
AERFEQRGRGAVSNQTGRYERETRAAFDDGWDTIENGAERLDTQVFDEVARTIITFNKS
CCHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDISFDRTVNPYRGCEHGCIYCFARPTHAWSGLSAGLDFESKLFRKTNATELLVRELSRP
CCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHCCC
GYVVRPIALGMNTDAYQPIEREQRLTRQLLEILSAHNHPVSLLTKSALIQRDIDILAPMA
CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
AMGLTRVGVSITTLDRKLARKMEPRAATPERRLETVRALSEAGIPVMVMTAPIIPGLNDH
HHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHH
EIEALIQAAAENGARGVGYVVLRLPFEIKDLFHEWLVQHAPDRAARVINTLREMRGGQDY
HHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
DAKWFERGTGKGPVADLIRARFIRAATRLNLNLPREPLRTDLFRPPGAPSAQLSLNF
CHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]