| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797555
Identifier: 114797555
GI number: 114797555
Start: 1972547
End: 1973164
Strand: Reverse
Name: 114797555
Synonym: HNE_1904
Alternate gene names: NA
Gene position: 1973164-1972547 (Counterclockwise)
Preceding gene: 114799335
Following gene: 114798617
Centisome position: 53.26
GC content: 65.37
Gene sequence:
>618_bases ATGCGTACAATATCCCTGCTGATTTTTGCCAAACCGCCCCGGATGGGACTTTCCAAGACACGTCTGGCCGAAGGGTTGGG AGCAACTGAAGCGCGGCGGATTGCCAGTTTCACGCTTGCCTCAACCCTGCGCGCCGCGCGGGCCAGCGGCCTGGAAGTAA AGGTCTACACGACGCCTGACCGTATGGGGGACACACCCAATGGCCGGGCCGTTTTCGGGGGGCTGCCGGTTCACCCTCAG GGGCCAGGTACGCTGACCGAGCGCCTGGAGCGGGGCCTCAATGACGCGCCGCCCGGCATGGTGTTTTTCATCGGCTCTGA CGCGCCCGACATAACGCCCGGCTTGCTGCGGCGCGCGGTGCGGGGCCTCGCGCAGCATGATGCTGTGTTTGGCCCGGCGC TGGATGGCGGTTTCTGGCTTTTCGGGATGCATAAGGGGCCGCAGACCCGGTCTCCCTTCCGGCGTGTGCGCTGGTCAGGC CCGCATGCGATGGAGGATGTGTGGAGCCACTTGCCAGAGACGGCGCGCGTCTGGCTCCTGCCGCCGCTGATCGACATTGA TGCAGCCCCCGATTGGGACAGCTGGCGCCTGTCACGGCGCAAATCCCACAGGAAGTAA
Upstream 100 bases:
>100_bases GCACCCCCGGCAACAAAGATACGGAATAGGCTGAACATGGATTGCGCTTTCGTGTCCGTGCTTACAGTGTCGGATTTTAT TCCGGCAAAACAAAGGCCCT
Downstream 100 bases:
>100_bases GTCCAAAAGTTCTTGCTTTGTTCTTGTTTCTCTGTCTTTCTCCCAGACATGCGCACGGGACAGAAACTGAAGAAATCAGG ACGGGTCACGCTTCTCGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MRTISLLIFAKPPRMGLSKTRLAEGLGATEARRIASFTLASTLRAARASGLEVKVYTTPDRMGDTPNGRAVFGGLPVHPQ GPGTLTERLERGLNDAPPGMVFFIGSDAPDITPGLLRRAVRGLAQHDAVFGPALDGGFWLFGMHKGPQTRSPFRRVRWSG PHAMEDVWSHLPETARVWLLPPLIDIDAAPDWDSWRLSRRKSHRK
Sequences:
>Translated_205_residues MRTISLLIFAKPPRMGLSKTRLAEGLGATEARRIASFTLASTLRAARASGLEVKVYTTPDRMGDTPNGRAVFGGLPVHPQ GPGTLTERLERGLNDAPPGMVFFIGSDAPDITPGLLRRAVRGLAQHDAVFGPALDGGFWLFGMHKGPQTRSPFRRVRWSG PHAMEDVWSHLPETARVWLLPPLIDIDAAPDWDSWRLSRRKSHRK >Mature_205_residues MRTISLLIFAKPPRMGLSKTRLAEGLGATEARRIASFTLASTLRAARASGLEVKVYTTPDRMGDTPNGRAVFGGLPVHPQ GPGTLTERLERGLNDAPPGMVFFIGSDAPDITPGLLRRAVRGLAQHDAVFGPALDGGFWLFGMHKGPQTRSPFRRVRWSG PHAMEDVWSHLPETARVWLLPPLIDIDAAPDWDSWRLSRRKSHRK
Specific function: Unknown
COG id: COG3222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22589; Mature: 22589
Theoretical pI: Translated: 11.64; Mature: 11.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTISLLIFAKPPRMGLSKTRLAEGLGATEARRIASFTLASTLRAARASGLEVKVYTTPD CCEEEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCH RMGDTPNGRAVFGGLPVHPQGPGTLTERLERGLNDAPPGMVFFIGSDAPDITPGLLRRAV HCCCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHH RGLAQHDAVFGPALDGGFWLFGMHKGPQTRSPFRRVRWSGPHAMEDVWSHLPETARVWLL HHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCEEEEE PPLIDIDAAPDWDSWRLSRRKSHRK CCEEECCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MRTISLLIFAKPPRMGLSKTRLAEGLGATEARRIASFTLASTLRAARASGLEVKVYTTPD CCEEEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCH RMGDTPNGRAVFGGLPVHPQGPGTLTERLERGLNDAPPGMVFFIGSDAPDITPGLLRRAV HCCCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHH RGLAQHDAVFGPALDGGFWLFGMHKGPQTRSPFRRVRWSGPHAMEDVWSHLPETARVWLL HHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCEEEEE PPLIDIDAAPDWDSWRLSRRKSHRK CCEEECCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA